Statistical results
Statistical analyses on IMPC data are tracked in a SOLR core called ‘statistical-result’. This core contains significance levels, effect sizes, and calls to abnormal phenotypes.
Some fields relevant to the ‘statistical-result’ core are provided in the table below.
| Field name | Description |
|---|---|
| marker_symbol | Mouse gene identifier in symbol format, e.g. Car4 |
| marker_accession_id | Mouse gene identifier in MGI id format, e.g. MGI:1096574 |
| zygosity | Zygosity of the mutant specimens |
| parameter_stable_id | Identifier for phenotyping parameter |
| p_value | P-value from a statistical procedure |
| mp_term_id | Identifier of a mammalian phenotype |
Several other fields are also available; a complete list of available parameters is available here.
Example – results for a gene symbol
Query criteria:
Marker symbol: Car4
Query URL:
https://www.ebi.ac.uk/mi/impc/solr/statistical-result/select?q=marker_symbol:Car4Example – results for a parameter
Query criteria:
Parameter identifier: IMPC_ECG_004_001 (RR interval)
Query URL:
https://www.ebi.ac.uk/mi/impc/solr/statistical-result/select?q=parameter_stable_id:IMPC_ECG_004_001