IMPC Data Release 16.0 Notes

IMPC

  • Release: 16.0
  • Published: 21 April 2022

Statistical Package

Genome Assembly

Summary

  • Number of phenotyped genes: 8,093
  • Number of phenotyped mutant lines: 8,741
  • Number of phenotype calls: 93,235

Data access

  • Ftp interface: ftp
  • RESTful interfaces: APIs

Highlights

Data release 16.0

Release notes:

Represents a major data release.
This release

  • Includes approximately 3 million more data points
  • Data for genes significantly associated with pain sensitivity included in the gene report pages.
  • All mouse production data used in the release was provided by GenTaR

Data Reports

Total Number of Lines and Specimens in DR 16.0

Phenotyping Center Mutant Lines Baseline Mice Mutant Mice
TCP 706 8,852 29,142
JAX 1,875 14,516 54,897
HMGU 464 5,365 8,971
CCP-IMG 234 2,515 4,345
MRC Harwell 796 7,303 20,002
MARC 233 1,858 3,588
KMPC 70 2,073 2,558
RBRC 108 2,149 2,448
ICS 239 2,619 3,882
WTSI 1,614 5,364 18,660
UC Davis 1,475 8,665 36,618
BCM 928 6,865 25,576

Experimental Data and Quality Checks

Data Type QC Passed Data Points
categorical 23,074,548
image record 738,538
time series 23,855,539
ontological 1,726,712
text 521,859
unidimensional 19,173,924

* Excluded from statistical analysis.

Distribution of Phenotype Annotations

Production Status

Overall

By Center

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More charts and status information are available from our mouse tracking services iMits and GenTaR.

Phenotype Associations

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Trends

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Previous Releases

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