IMPC Data Release 13.0 Notes

IMPC

  • Release: 13.0
  • Published: 17-December-2020

Statistical Package

Genome Assembly

Summary

  • Number of phenotyped genes: 7,360
  • Number of phenotyped mutant lines: 7,970
  • Number of phenotype calls: 86,536

Data access

  • Ftp interface: ftp
  • RESTful interfaces: APIs

Highlights

Data release 13.0

Release notes:

Represents a major data release. This release

Data Reports

Total Number of Lines and Specimens in DR 13.0

Phenotyping Center Mutant Lines Baseline Mice Mutant Mice
TCP 661 8,151 27,160
JAX 1,710 11,841 46,344
HMGU 367 4,124 6,958
CCP-IMG 143 1,605 2,680
MRC Harwell 737 7,101 18,672
MARC 233 1,858 3,595
KMPC 57 1,478 1,936
RBRC 103 2,136 2,370
ICS 240 2,612 3,871
WTSI 1,600 5,372 18,660
UC Davis 1,406 7,376 32,485
BCM 714 6,229 20,880

Experimental Data and Quality Checks

Data Type QC Passed Data Points
categorical 20,780,695
image record 572,772
time series 18,293,301
ontological 1,240,938
text 415,798
unidimensional 15,584,538

* Excluded from statistical analysis.

Distribution of Phenotype Annotations

Production Status

Overall

By Center

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More charts and status information are available from our mouse tracking services iMits and GenTaR.

Phenotype Associations

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Trends

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Previous Releases

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