Phenotype: abnormal contextual conditioning behavior

Definition
anomaly in the ability of an animal to learn and remember an association between an aversive experience (the unconditioned stimulus (US), usually a shock) and the neutral, unchanging environment (the conditioned stimulus (CS), or the environmental context in this case)
Synonyms
contextual conditioning anomalies,  abnormal contextual conditioning behaviour,  contextual fear conditioning abnormalities,  abnormal contextual fear conditioning
0%
of tested genes
0
significant genes
0
tested genes

IMPC Gene variants with abnormal contextual conditioning behavior

Total number of significant genotype-phenotype associations: 40

Gene / Allele Zygosity Sex Life Stage Phenotype Parameter Phenotyping
Center
P Value
Plaat5
Plaat5em1(IMPC)Tcp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
3.00×10-12
Gria1
Gria1em1(IMPC)H
HOM Late adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
MRC Harwell
IMPC
6.61×10-10
Ms4a4a
Ms4a4aem1(IMPC)Mbp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
2.50×10-08
Sox2
Sox2em1(IMPC)Mbp
HET Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
3.00×10-08
Gmppa
Gmppaem1(IMPC)Tcp
HOM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
3.61×10-08
Dele1
Dele1em2(IMPC)Ccpcz
HOM   Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
CCP-IMG
IMPC
7.43×10-07
Thra
Thratm1b(EUCOMM)Wtsi
HET   Late adult abnormal contextual conditioning behavior % Freezing duration context-1
Fear Conditioning
ICS
IMPC
3.41×10-06
Tmprss2
Tmprss2tm2b(EUCOMM)Hmgu
HOM Early adult abnormal contextual conditioning behavior % Freezing duration context-1
Fear Conditioning
ICS
IMPC
4.02×10-06
Mir124a-2
Mir124a-2tm1b(mirKO)Wtsi
HET   Early adult abnormal contextual conditioning behavior % Context freezing total
Fear Conditioning
ICS
IMPC
5.88×10-06
Atad2b
Atad2btm1b(EUCOMM)Hmgu
HOM   Early adult abnormal contextual conditioning behavior % Freezing duration context-2
Fear Conditioning
ICS
IMPC
6.00×10-06
Cartpt
Cartptem1(IMPC)Mbp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
6.06×10-06
Hmbox1
Hmbox1em1(IMPC)Tcp
HOM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
9.33×10-06
Thra
Thratm1b(EUCOMM)Wtsi
HET   Early adult abnormal contextual conditioning behavior % Freezing duration context-2
Fear Conditioning
ICS
IMPC
2.01×10-05
Babam1
Babam1em1(IMPC)Ccpcz
HOM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
CCP-IMG
IMPC
2.46×10-05
Ubqln4
Ubqln4em1(IMPC)Mbp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
2.64×10-05
Nab2
Nab2tm1b(EUCOMM)Hmgu
HOM Early adult abnormal contextual conditioning behavior Context freezing total
Fear Conditioning
ICS
IMPC
2.65×10-05
Ap4e1
Ap4e1tm1b(KOMP)Wtsi
HOM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
3.12×10-05
Nexmif
Nexmifem1(IMPC)Tcp
HEM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
3.20×10-05
Aak1
Aak1tm1b(EUCOMM)Hmgu
HOM   Early adult abnormal contextual conditioning behavior Context freezing total
Fear Conditioning
ICS
IMPC
3.39×10-05
Kcnt2
Kcnt2em1(IMPC)Mbp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
3.51×10-05
Il2ra
Il2ratm1b(EUCOMM)Wtsi
HOM Early adult abnormal contextual conditioning behavior % Freezing duration context-1
Fear Conditioning
ICS
IMPC
3.52×10-05
Tmtc2
Tmtc2em2(IMPC)Kmpc
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
KMPC
IMPC
3.85×10-05
Ptchd1
Ptchd1tm1b(KOMP)IcsOrl
HOM Early adult abnormal contextual conditioning behavior Context freezing total
Fear Conditioning
ICS
IMPC
4.08×10-05
Pgbd5
Pgbd5em1(IMPC)Tcp
HOM   Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
4.84×10-05
Irag1
Irag1em1(IMPC)Ccpcz
HOM   Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
CCP-IMG
IMPC
5.00×10-05
Rab19
Rab19tm1b(EUCOMM)Hmgu
HOM Early adult abnormal contextual conditioning behavior Context freezing total
Fear Conditioning
ICS
IMPC
5.41×10-05
Ubl7
Ubl7em1(IMPC)Tcp
HOM   Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
5.73×10-05
Serac1
Serac1em1(IMPC)Tcp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
6.56×10-05
Slc25a18
Slc25a18tm1b(KOMP)Wtsi
HOM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
KMPC
IMPC
6.57×10-05
Wdr27
Wdr27em1(IMPC)Ccpcz
HOM   Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
CCP-IMG
IMPC
8.45×10-05
Ppp4c
Ppp4cem1(IMPC)Ics
HET Early adult abnormal contextual conditioning behavior % Freezing duration context-3
Fear Conditioning
ICS
IMPC
9.12×10-05
Cacna2d1
Cacna2d1em1(IMPC)Mbp
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
9.33×10-05
Marchf3
Marchf3tm1b(EUCOMM)Hmgu
HOM Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
CCP-IMG
IMPC
9.50×10-05
Ubd
Ubdtm1b(EUCOMM)Wtsi
HOM   Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
CCP-IMG
IMPC
9.90×10-05
Prkab1
Prkab1tm1b(KOMP)Wtsi
HOM Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
9.91×10-05
Tmem225
Tmem225em1(IMPC)Mbp
HOM   Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
9.93×10-05
Asic1
Asic1em1(IMPC)Mbp
HOM   Early adult impaired contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
UC Davis
IMPC
9.95×10-05
Cyp21a1
Cyp21a1em1(IMPC)Tcp
HET Early adult enhanced contextual conditioning behavior Difference in Context and Conditioning Baseline % Freezing
Fear Conditioning
TCP
IMPC
9.96×10-05

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 The way we measure

Procedure
Fear Conditioning

 Phenotype associations stats

2.08% of tested genes with null mutations on a B6N genetic background have a phenotype association to abnormal contextual conditioning behavior (37/1778)

0.86% females (14/1637) 0.74% males (13/1766)

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