Gene knock-out effect comparator
The parallel coordinates viewer allows to visualize multiple mouse lines for multiple parameters for selected procedures. Only continuous parameters can be visualized using this methodology.
The values displayed are genotype effects. The measurement values are corrected to account for batch effects to represent the true genotype effect, thus allowing a side-by-side comparison.
How to use this tool?
Select one or several procedure(s) using the procedure filter tab. Additional optional filtering include phenotyping center or mouse gene list of interest selection. If no genes are selected, the tool will show all genes in IMPC for the selected procedure(s) and/or center selected.
The graph is interactive and allows filtering on each axis (parameter) by selecting the region of interest. Several regions of interests can be selected one by one.
Clicking on a chosen line on the graph or on a gene name from the table will highlight the corresponding gene. For a selected gene, if any significant phenotype is associated with a parameter, the parameter name will change to bold. To remove all filters, simply reload the page.
More information can be found in the Help pages.
A moment please while we gather the data . . . .