Histopathology data for Upf3a

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #4 Sciatic nerve [MA:0001172]
HOM F #1 Spinal cord [MA:0000216]
HOM M #4 Lung [MA:0000415]
HOM M #3 Sternum [MA:0001331]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #2 Gall bladder [MA:0000356]
HOM F #2 Thyroid
HOM M #3 Bone marrow [MA:0000134]
HOM M #4 Large intestine [MA:0000333]
HOM F #2 Sternum [MA:0001331]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Tongue [MA:0000347]
HOM F #1 Esophagus [MA:0000352]
HOM F #1 Heart [MA:0000072]
HOM F #1 Stomach [MA:0000353]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #1 Eye [MA:0000261] 1 0 chronic probable unilateral cataract
HOM M #4 Kidney [MA:0000368]
HOM F #2 Lung [MA:0000415]
HOM M #3 Ear [MA:0000236]
HOM F #2 Trachea [MA:0000441]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Large intestine [MA:0000333]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #2 Lymph node [MA:0000139]
HOM M #4 Sternum [MA:0001331]
HOM F #2 Tongue [MA:0000347]
HOM F #2 Knee joint [MA:0000471]
HOM M #4 Thyroid
HOM M #3 Spleen [MA:0000141]
HOM F #2 Kidney [MA:0000368]
HOM M #3 Adrenal gland [MA:0000116]
HOM F #1 Pancreas [MA:0000120]
HOM F #1 Liver [MA:0000358] 1 0 Mild multifocal chronic non-suppurative hepatitis with single hepatocyte necrosis
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #1 Thyroid
HOM M #3 Tibia [MA:0001361]
HOM M #4 Lymph node [MA:0000139]
HOM F #1 Skin [MA:0000151]
HOM F #2 Ear [MA:0000236]
HOM F #2 Spinal cord [MA:0000216]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Prostate gland [MA:0000404]
HOM F #1 Lung [MA:0000415]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #2 Ovary [MA:0000384]
HOM F #1 Kidney [MA:0000368]
HOM M #4 Knee joint [MA:0000471]
HOM M #4 Ear [MA:0000236]
HOM M #3 Gall bladder [MA:0000356]
HOM F #2 Thymus [MA:0000142]
HOM M #3 Eye [MA:0000261]
HOM M #3 Testis [MA:0000411] 2 1 Moderate to marked testicular atrophy and degeneration with germ cell exfoliation,multinucleation and absence of mature spermatids
HOM F #1 Tongue [MA:0000347]
HOM M #4 Trachea [MA:0000441]
HOM F #2 Uterus [MA:0000389]
HOM M #3 Tooth [MA:0000348]
HOM F #2 Small intestine [MA:0000337]
HOM M #4 Spleen [MA:0000141]
HOM M #4 Liver [MA:0000358] 2 1 Moderate multifocal portal venous hypoperfusion or hypoplasia with arteriolar reduplication, biliary hyperplasia and lymphatic ectasia
HOM F #2 Large intestine [MA:0000333]
HOM F #1 Sternum [MA:0001331]
HOM F #2 Brain [MA:0000168]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #3 Stomach [MA:0000353]
HOM F #2 Mammary gland [MA:0000145]
HOM F #1 Bone [MA:0001459]
HOM F #2 Liver [MA:0000358]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #4 Thymus [MA:0000142]
HOM M #4 Skin [MA:0000151]
HOM F #2 Urinary bladder [MA:0000380]
HOM F #2 Spleen [MA:0000141]
HOM M #4 Pancreas [MA:0000120]
HOM M #4 Skeletal muscle [MA:0003148]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #4 Brain [MA:0000168]
HOM F #1 Ovary [MA:0000384]
HOM M #3 Esophagus [MA:0000352]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #1 Knee joint [MA:0000471]
HOM F #1 Ear [MA:0000236]
HOM F #2 Femur [MA:0001359]
HOM M #3 Epididymis [MA:0000397]
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #1 Thymus [MA:0000142]
HOM F #2 Skin [MA:0000151]
HOM F #1 Lymph node [MA:0000139]
HOM M #3 Liver [MA:0000358] 2 0 Moderate multifocal portal venous hypoperfusion or hypoplasia with arteriolar reduplication, biliary hyperplasia and portal bridging (consistent with a portosystemic shunt)
HOM F #2 Pancreas [MA:0000120]
HOM M #4 Tibia [MA:0001361]
HOM M #4 Femur [MA:0001359]
HOM F #1 Trachea [MA:0000441]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #3 Pancreas [MA:0000120]
HOM F #2 Tooth [MA:0000348]
HOM F #1 Bone marrow [MA:0000134]
HOM M #4 Bone [MA:0001459]
HOM F #1 Mammary gland [MA:0000145]
HOM M #3 Femur [MA:0001359]
HOM M #3 Salivary gland [MA:0000346]
HOM F #1 Tibia [MA:0001361]
HOM M #4 Salivary gland [MA:0000346]
HOM F #1 Uterus [MA:0000389]
HOM F #1 Spleen [MA:0000141]
HOM F #2 Stomach [MA:0000353]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #1 Small intestine [MA:0000337]
HOM M #3 Heart [MA:0000072]
HOM F #1 Brain [MA:0000168]
HOM F #1 Gall bladder [MA:0000356]
HOM F #1 Femur [MA:0001359]
HOM M #3 Large intestine [MA:0000333]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #4 Stomach [MA:0000353]
HOM M #4 Heart [MA:0000072]
HOM M #4 Epididymis [MA:0000397]
HOM M #3 Lung [MA:0000415]
HOM F #2 Bone [MA:0001459]
HOM M #3 Small intestine [MA:0000337]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Tooth [MA:0000348]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #1 Brown adipose tissue [MA:0000057] 1 0 Mild multifocal chronic steatitis
HOM M #3 Bone [MA:0001459]
HOM F #2 Eye [MA:0000261]
HOM M #3 Brain [MA:0000168]
HOM M #4 Esophagus [MA:0000352]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #1 Salivary gland [MA:0000346]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #3 Skin [MA:0000151]
HOM F #2 Tibia [MA:0001361]
HOM M #3 Thyroid
HOM M #3 Thymus [MA:0000142]
HOM F #2 Heart [MA:0000072]
HOM F #2 Esophagus [MA:0000352]
HOM M #3 Prostate gland [MA:0000404]
HOM M #4 Bone marrow [MA:0000134]
HOM M #3 Kidney [MA:0000368]
HOM M #4 Gall bladder [MA:0000356]
HOM M #4 Tooth [MA:0000348]
HOM M #4 Eye [MA:0000261]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Spinal cord [MA:0000216]
HOM M #3 Lymph node [MA:0000139]
HOM M #3 Trachea [MA:0000441]
HOM M #4 Testis [MA:0000411] 2 1 Marked testicular degeneration and atrophy with germ cell exfoliation and atrophy
HOM M #3 Knee joint [MA:0000471]

Associated histopathology images

Upf3a
homozygote
Testis - MA term MA:0000411
Upf3aem1(IMPC)Mbp
experimental
Upf3a
homozygote
Liver - MA term MA:0000358
Upf3aem1(IMPC)Mbp
experimental
Upf3a
homozygote
Testis - MA term MA:0000411
Upf3aem1(IMPC)Mbp
experimental
Upf3a
homozygote
Liver - MA term MA:0000358
Upf3aem1(IMPC)Mbp
experimental

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