Histopathology data for Sra1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #2 Salivary gland [MA:0000346] 0 0
HOM M #1 Stomach [MA:0000353] 0 0
HOM F #4 Skeletal muscle [MA:0003148] 0 0
HOM F #4 Esophagus [MA:0000352] 0 0
HOM F #4 Bone marrow [MA:0000134] 0 0
HOM F #2 Tooth [MA:0000348] 0 0
HOM F #2 Optic II nerve [MA:0001097] 0 0
HOM F #4 Skin [MA:0000151] 0 0
HOM M #1 Prostate gland [MA:0000404] 0 0
HOM F #4 Heart [MA:0000072] 0 0
HOM M #1 Lung [MA:0000415] 0 0
HOM M #1 Ear [MA:0000236] 0 0
HOM M #1 Large intestine [MA:0000333] 0 0
HOM M #1 Brain [MA:0000168] 1 0 bilateral Bilateral and mild dilation of the lateral ventricles
HOM M #3 Small intestine [MA:0000337] 0 0
HOM F #4 Uterus [MA:0000389] 0 0
HOM M #3 Liver [MA:0000358] 0 0
HOM M #1 Adrenal gland [MA:0000116] 0 0
HOM F #2 Pancreas [MA:0000120] 0 0
HOM F #2 Eye [MA:0000261] 0 0
HOM F #4 Sciatic nerve [MA:0001172] 0 0
HOM F #4 Large intestine [MA:0000333] 0 0
HOM F #4 Eye [MA:0000261] 0 0
HOM F #2 Sciatic nerve [MA:0001172] 0 0
HOM M #3 Adrenal gland [MA:0000116] 0 0
HOM F #4 Ear [MA:0000236] 0 0
HOM M #3 Kidney [MA:0000368] 0 0
HOM M #1 Tongue [MA:0000347] 0 0
HOM M #1 Spleen [MA:0000141] 0 0
HOM F #4 Thyroid 0 0
HOM F #4 Gall bladder [MA:0000356] 0 0
HOM M #1 Kidney [MA:0000368] 0 0
HOM M #1 Heart [MA:0000072] 0 0
HOM F #2 Gall bladder [MA:0000356] 0 0
HOM F #2 Thyroid 0 0
HOM F #4 Urinary bladder [MA:0000380] 0 0
HOM F #4 Adrenal gland [MA:0000116] 0 0
HOM F #4 Seminal vesicle [MA:0000410] Not applicable
HOM M #3 Large intestine [MA:0000333] 0 0
HOM M #1 Spinal cord [MA:0000216] 0 0
HOM M #3 Testis [MA:0000411] 0 0
HOM M #1 Trachea [MA:0000441] 0 0
HOM M #1 Eye [MA:0000261] 0 0
HOM F #2 Uterus [MA:0000389] 0 0
HOM M #1 Nasal cavity [MA:0000284] 0 0
HOM F #2 Small intestine [MA:0000337] 0 0
HOM F #4 Ovary [MA:0000384] 0 0
HOM F #4 Kidney [MA:0000368] 0 0
HOM F #2 Tongue [MA:0000347] 0 0
HOM F #4 Salivary gland [MA:0000346] 0 0
HOM M #3 Urinary bladder [MA:0000380] 0 0
HOM F #2 Bone marrow [MA:0000134] 0 0
HOM F #4 Spleen [MA:0000141] 0 0
HOM M #3 Prostate gland [MA:0000404] 0 0
HOM F #2 Esophagus [MA:0000352] 0 0
HOM F #4 Testis [MA:0000411] Not applicable
HOM M #1 Gall bladder [MA:0000356] 0 0
HOM M #3 Salivary gland [MA:0000346] 0 0
HOM M #1 Thyroid 0 0
HOM F #2 Lymph node [MA:0000139] 0 0
HOM M #1 Skin [MA:0000151] 0 0
HOM M #1 Thymus [MA:0000142] 1 0 localized Thymic cyst
HOM M #3 Ear [MA:0000236] 0 0
HOM M #1 Skeletal muscle [MA:0003148] 0 0
HOM F #4 Lymph node [MA:0000139] 0 0
HOM F #2 Testis [MA:0000411] Not applicable
HOM F #4 Prostate gland [MA:0000404] Not applicable
HOM M #1 Epididymis [MA:0000397] 0 0
HOM F #2 Prostate gland [MA:0000404] Not applicable
HOM M #3 Uterus [MA:0000389] Not applicable
HOM M #1 Tooth [MA:0000348] 0 0
HOM F #4 Tongue [MA:0000347] 0 0
HOM M #1 Sternum [MA:0001331] 0 0
HOM F #4 Brain [MA:0000168] 0 0
HOM M #3 Seminal vesicle [MA:0000410] 0 0
HOM F #4 Optic II nerve [MA:0001097] 0 0
HOM M #3 Esophagus [MA:0000352] 0 0
HOM M #1 Femur [MA:0001359] 0 0
HOM F #2 Brain [MA:0000168] 0 0
HOM M #3 Sciatic nerve [MA:0001172] 0 0
HOM M #1 Mammary gland [MA:0000145] Not applicable
HOM M #3 Ovary [MA:0000384] Not applicable
HOM M #3 Bone marrow [MA:0000134] 0 0
HOM F #2 Epididymis [MA:0000397] Not applicable
HOM F #2 Ovary [MA:0000384] 0 0
HOM F #2 Adrenal gland [MA:0000116] 0 0
HOM M #1 Pancreas [MA:0000120] 0 0
HOM M #3 Lymph node [MA:0000139] 0 0
HOM M #1 Testis [MA:0000411] 0 0
HOM F #4 Small intestine [MA:0000337] 0 0
HOM M #3 Nasal cavity [MA:0000284] 0 0
HOM M #3 Trachea [MA:0000441] 0 0
HOM F #2 Urinary bladder [MA:0000380] 0 0
HOM F #2 Spleen [MA:0000141] 0 0
HOM F #2 Sternum [MA:0001331] 0 0
HOM F #2 Kidney [MA:0000368] 0 0
HOM F #4 Liver [MA:0000358] 0 0
HOM F #4 Mammary gland [MA:0000145] 0 0
HOM F #4 Thymus [MA:0000142] 0 0
HOM F #2 Seminal vesicle [MA:0000410] Not applicable
HOM M #3 Brain [MA:0000168] 0 0
HOM M #3 Heart [MA:0000072] 0 0
HOM F #2 Spinal cord [MA:0000216] 0 0
HOM M #3 Optic II nerve [MA:0001097] 0 0
HOM F #4 Spinal cord [MA:0000216] 0 0
HOM F #2 Large intestine [MA:0000333] 0 0
HOM F #2 Femur [MA:0001359] 0 0
HOM M #3 Lung [MA:0000415] 0 0
HOM M #1 Optic II nerve [MA:0001097] 0 0
HOM F #4 Femur [MA:0001359] 0 0
HOM F #4 Pancreas [MA:0000120] 0 0
HOM F #2 Ear [MA:0000236] 0 0
HOM M #3 White adipose tissue [MA:0000058] 1 0 chronic-active focally extensive Peripancreatic focally extensive steatitis
HOM M #3 Tongue [MA:0000347] 0 0
HOM M #1 Liver [MA:0000358] 0 0
HOM F #2 Skin [MA:0000151] 0 0
HOM M #1 Lymph node [MA:0000139] 0 0
HOM M #3 Spleen [MA:0000141] 2 0 multifocal to coalescing Lymphoid hyperplasia
HOM F #2 Skeletal muscle [MA:0003148] 0 0
HOM F #4 Tooth [MA:0000348] 0 0
HOM M #1 Sciatic nerve [MA:0001172] 0 0
HOM F #4 Epididymis [MA:0000397] Not applicable
HOM M #3 Stomach [MA:0000353] 0 0
HOM M #3 Tooth [MA:0000348] 0 0
HOM F #4 Sternum [MA:0001331] 0 0
HOM F #2 Heart [MA:0000072] 0 0
HOM F #2 Liver [MA:0000358] 0 0
HOM F #2 Thymus [MA:0000142] 0 0
HOM F #2 Mammary gland [MA:0000145] 0 0
HOM F #2 Stomach [MA:0000353] 0 0
HOM M #1 Bone [MA:0001459] 1 0 chronic multi-localised Multifocal chronic inflammatory infiltrates
HOM M #1 Salivary gland [MA:0000346] 0 0
HOM M #1 Small intestine [MA:0000337] 0 0
HOM F #4 Trachea [MA:0000441] 0 0
HOM F #2 Nasal cavity [MA:0000284] 0 0
HOM M #1 Ovary [MA:0000384] Not applicable
HOM M #1 Uterus [MA:0000389] Not applicable
HOM M #3 Thyroid 0 0
HOM M #3 Thymus [MA:0000142] 0 0
HOM M #3 Gall bladder [MA:0000356] 0 0
HOM M #3 Mammary gland [MA:0000145] Not applicable
HOM M #1 Urinary bladder [MA:0000380] 0 0
HOM M #3 Spinal cord [MA:0000216] 0 0
HOM M #3 Skeletal muscle [MA:0003148] 0 0
HOM M #1 Bone marrow [MA:0000134] 0 0
HOM F #2 Lung [MA:0000415] 0 0
HOM F #4 Lung [MA:0000415] 0 0
HOM M #3 Sternum [MA:0001331] 2 0 chronic localized Sternal segment dislocation
HOM M #3 Skin [MA:0000151] 0 0
HOM F #2 Trachea [MA:0000441] 0 0
HOM M #1 Seminal vesicle [MA:0000410] 0 0
HOM M #3 Femur [MA:0001359] 0 0
HOM F #4 Nasal cavity [MA:0000284] 0 0
HOM M #1 Esophagus [MA:0000352] 0 0
HOM M #3 Epididymis [MA:0000397] 0 0
HOM F #4 Stomach [MA:0000353] 0 0
HOM M #3 Eye [MA:0000261] 0 0
HOM M #3 Pancreas [MA:0000120] 0 0

Associated histopathology images

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