Histopathology data for Stat4

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #2 Spinal cord [MA:0000216]
HOM M #1 Prostate gland [MA:0000404]
HOM F #3 Spinal cord [MA:0000216] 1 0 Spinal cord: Focal, epidermoid cyst
HOM M #1 Lung [MA:0000415]
HOM F #3 Femur [MA:0001359]
HOM M #1 Tongue [MA:0000347]
HOM M #1 Stomach [MA:0000353]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #4 Small intestine [MA:0000337]
HOM F #2 Femur [MA:0001359]
HOM M #1 Sternum [MA:0001331]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #1 Heart [MA:0000072]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #1 Kidney [MA:0000368]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #1 Adrenal gland [MA:0000116]
HOM F #2 Kidney [MA:0000368]
HOM F #3 Kidney [MA:0000368]
HOM M #1 Urinary bladder [MA:0000380]
HOM F #2 Tibia [MA:0001361]
HOM F #2 Liver [MA:0000358]
HOM F #3 Liver [MA:0000358]
HOM F #3 Tibia [MA:0001361]
HOM M #4 Tibia [MA:0001361]
HOM M #1 Nasal cavity [MA:0000284]
HOM F #3 Spleen [MA:0000141]
HOM F #3 Large intestine [MA:0000333]
HOM M #4 Liver [MA:0000358]
HOM M #1 Trachea [MA:0000441]
HOM F #2 Spleen [MA:0000141]
HOM M #1 Brain [MA:0000168]
HOM M #4 Kidney [MA:0000368]
HOM F #2 Stomach [MA:0000353]
HOM M #4 Large intestine [MA:0000333]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #1 Sciatic nerve [MA:0001172]
HOM M #4 Salivary gland [MA:0000346]
HOM F #3 Tongue [MA:0000347]
HOM F #2 Sternum [MA:0001331]
HOM F #2 Lung [MA:0000415]
HOM F #2 Pancreas [MA:0000120]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #1 Bone [MA:0001459]
HOM M #1 Esophagus [MA:0000352]
HOM F #2 Skin [MA:0000151]
HOM F #3 Urinary bladder [MA:0000380]
HOM F #2 Mammary gland [MA:0000145]
HOM F #3 Small intestine [MA:0000337]
HOM M #4 Prostate gland [MA:0000404]
HOM F #2 Thymus [MA:0000142]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM F #2 Knee joint [MA:0000471]
HOM F #3 Ovary [MA:0000384]
HOM F #3 Adrenal gland [MA:0000116]
HOM F #3 Salivary gland [MA:0000346]
HOM M #1 Bone marrow [MA:0000134]
HOM M #4 Brain [MA:0000168]
HOM F #3 Esophagus [MA:0000352]
HOM F #3 Brain [MA:0000168]
HOM F #3 Bone [MA:0001459]
HOM M #4 Bone [MA:0001459]
HOM M #1 Large intestine [MA:0000333]
HOM M #4 Testis [MA:0000411]
HOM F #3 Uterus [MA:0000389]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #1 Ear [MA:0000236]
HOM F #2 Tooth [MA:0000348]
HOM F #3 Trachea [MA:0000441]
HOM F #2 Lymph node [MA:0000139]
HOM M #4 Esophagus [MA:0000352]
HOM F #2 Eye [MA:0000261]
HOM F #2 Trachea [MA:0000441]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #1 Pancreas [MA:0000120]
HOM F #3 Gall bladder [MA:0000356]
HOM M #4 Eye [MA:0000261]
HOM F #3 Thyroid
HOM M #4 Sciatic nerve [MA:0001172]
HOM F #2 Gall bladder [MA:0000356]
HOM M #4 Bone marrow [MA:0000134]
HOM M #1 Testis [MA:0000411]
HOM M #4 Skin [MA:0000151]
HOM M #1 Liver [MA:0000358]
HOM F #2 Thyroid
HOM M #4 Skeletal muscle [MA:0003148]
HOM M #1 Thymus [MA:0000142] 1 0 Thymus: Mild, multifocal cysts
HOM F #3 Bone marrow [MA:0000134]
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, paracortical lymphoid hyperplasia
HOM F #3 Nasal cavity [MA:0000284]
HOM F #3 Eye [MA:0000261]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #3 Sciatic nerve [MA:0001172]
HOM F #3 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, paracortical lymphoid hyperplasia
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #4 Trachea [MA:0000441]
HOM M #1 Tibia [MA:0001361]
HOM F #3 Skeletal muscle [MA:0003148]
HOM M #4 Lung [MA:0000415]
HOM M #4 Thyroid
HOM M #4 Gall bladder [MA:0000356]
HOM M #1 Knee joint [MA:0000471]
HOM F #2 Heart [MA:0000072]
HOM M #4 Heart [MA:0000072]
HOM M #4 Ear [MA:0000236]
HOM F #2 Ear [MA:0000236]
HOM M #4 Tongue [MA:0000347]
HOM F #3 Heart [MA:0000072]
HOM M #1 Tooth [MA:0000348]
HOM F #3 Ear [MA:0000236]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM M #1 Small intestine [MA:0000337]
HOM M #1 Salivary gland [MA:0000346]
HOM M #1 Femur [MA:0001359]
HOM M #1 Gall bladder [MA:0000356]
HOM F #3 Pancreas [MA:0000120]
HOM M #4 Spleen [MA:0000141]
HOM M #4 Sternum [MA:0001331]
HOM F #3 Stomach [MA:0000353]
HOM M #4 Tooth [MA:0000348]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM M #4 Knee joint [MA:0000471]
HOM F #2 Large intestine [MA:0000333]
HOM M #1 Lymph node [MA:0000139]
HOM M #4 Stomach [MA:0000353]
HOM F #3 Sternum [MA:0001331]
HOM F #2 Tongue [MA:0000347]
HOM M #1 Eye [MA:0000261]
HOM F #3 Lung [MA:0000415]
HOM M #1 Spinal cord [MA:0000216]
HOM M #1 Epididymis [MA:0000397]
HOM F #3 Skin [MA:0000151]
HOM F #2 Bone [MA:0001459]
HOM F #2 Small intestine [MA:0000337]
HOM F #2 Ovary [MA:0000384]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #2 Uterus [MA:0000389] 1 0 Uterus: Mild, stromal edema
HOM F #3 Knee joint [MA:0000471]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Brain [MA:0000168]
HOM M #4 Pancreas [MA:0000120]
HOM M #4 Femur [MA:0001359]
HOM M #1 Skin [MA:0000151]
HOM F #3 Mammary gland [MA:0000145]
HOM F #3 Thymus [MA:0000142]
HOM F #2 Esophagus [MA:0000352]
HOM M #1 Spleen [MA:0000141]
HOM M #1 Skeletal muscle [MA:0003148]
HOM M #4 Thymus [MA:0000142]
HOM M #4 Epididymis [MA:0000397]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Spinal cord [MA:0000216]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #1 Thyroid
HOM F #3 Tooth [MA:0000348]

Associated histopathology images

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