Histopathology data for Scg5

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #1 Seminal vesicle [MA:0000410]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #2 Urinary bladder [MA:0000380]
HOM M #1 Small intestine [MA:0000337]
HOM M #2 Pancreas [MA:0000120] 1 0 Pancreas: Subjective decrease in islets
HOM F #3 Small intestine [MA:0000337]
HOM M #1 Tibia [MA:0001361]
HOM F #3 Mammary gland [MA:0000145]
HOM F #3 Thymus [MA:0000142]
HOM F #3 Tibia [MA:0001361]
HOM F #3 Liver [MA:0000358]
HOM M #2 Liver [MA:0000358]
HOM M #1 Femur [MA:0001359]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM M #1 Salivary gland [MA:0000346]
HOM M #1 Prostate gland [MA:0000404]
HOM M #2 Nasal cavity [MA:0000284]
HOM M #2 Salivary gland [MA:0000346]
HOM M #1 Bone [MA:0001459]
HOM M #2 Esophagus [MA:0000352]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM M #2 Femur [MA:0001359]
HOM F #3 Adrenal gland [MA:0000116]
HOM M #2 Heart [MA:0000072]
HOM F #3 Kidney [MA:0000368]
HOM M #2 Eye [MA:0000261] 1 0 Eye: Rare retinal dysplasia
HOM M #1 Skeletal muscle [MA:0003148]
HOM M #1 Trachea [MA:0000441]
HOM F #3 Tooth [MA:0000348]
HOM M #2 Tibia [MA:0001361]
HOM M #1 Lymph node [MA:0000139] 1 0 Mesenteric lymph node: Mild lymphoid hyperplasia
HOM F #3 Sternum [MA:0001331]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM F #3 Knee joint [MA:0000471]
HOM M #1 Knee joint [MA:0000471]
HOM F #3 Spleen [MA:0000141]
HOM F #3 Gall bladder [MA:0000356]
HOM M #1 Ear [MA:0000236]
HOM M #2 Gall bladder [MA:0000356]
HOM M #2 Testis [MA:0000411]
HOM F #3 Thyroid
HOM F #3 Spinal cord [MA:0000216]
HOM M #2 Tooth [MA:0000348]
HOM M #1 Spleen [MA:0000141]
HOM M #2 Sciatic nerve [MA:0001172]
HOM M #1 Thymus [MA:0000142]
HOM F #3 Femur [MA:0001359]
HOM F #3 Pancreas [MA:0000120] 1 0 Pancreas: Subjective decrease to absent islets
HOM M #1 Skin [MA:0000151]
HOM F #3 Eye [MA:0000261]
HOM F #3 Skin [MA:0000151]
HOM M #1 Pancreas [MA:0000120]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM M #1 Brain [MA:0000168]
HOM F #3 Skeletal muscle [MA:0003148]
HOM M #2 Stomach [MA:0000353]
HOM M #1 Urinary bladder [MA:0000380]
HOM M #2 Epididymis [MA:0000397]
HOM M #1 Liver [MA:0000358]
HOM F #3 Esophagus [MA:0000352]
HOM M #2 Sternum [MA:0001331]
HOM M #1 Tongue [MA:0000347]
HOM M #2 Bone marrow [MA:0000134]
HOM M #2 Kidney [MA:0000368]
HOM M #2 Spleen [MA:0000141]
HOM M #1 Large intestine [MA:0000333]
HOM M #1 Eye [MA:0000261] 1 0 Eye: Rare retinal dysplasia and lens capsular wrinkling
HOM M #1 Sciatic nerve [MA:0001172]
HOM F #3 Bone marrow [MA:0000134]
HOM F #3 Uterus [MA:0000389]
HOM F #3 Heart [MA:0000072]
HOM M #2 Skeletal muscle [MA:0003148]
HOM M #2 Thyroid
HOM M #1 Lung [MA:0000415]
HOM F #3 Lung [MA:0000415]
HOM F #3 Tongue [MA:0000347]
HOM M #1 Spinal cord [MA:0000216]
HOM M #1 Kidney [MA:0000368]
HOM M #2 Ear [MA:0000236]
HOM M #1 Nasal cavity [MA:0000284]
HOM M #2 Adrenal gland [MA:0000116]
HOM F #3 Nasal cavity [MA:0000284]
HOM F #3 Brain [MA:0000168]
HOM F #3 Lymph node [MA:0000139]
HOM F #3 Trachea [MA:0000441]
HOM M #1 Thyroid
HOM F #3 Stomach [MA:0000353]
HOM M #1 Epididymis [MA:0000397]
HOM F #3 Urinary bladder [MA:0000380]
HOM M #2 Large intestine [MA:0000333]
HOM F #3 Ovary [MA:0000384]
HOM F #3 Salivary gland [MA:0000346]
HOM M #2 Small intestine [MA:0000337]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM M #1 Sternum [MA:0001331]
HOM F #3 Bone [MA:0001459]
HOM M #1 Bone marrow [MA:0000134]
HOM M #2 Bone [MA:0001459]
HOM M #1 Stomach [MA:0000353]
HOM M #2 Brain [MA:0000168]
HOM M #1 Esophagus [MA:0000352]
HOM M #1 Heart [MA:0000072]
HOM M #2 Prostate gland [MA:0000404]
HOM M #2 Spinal cord [MA:0000216]
HOM M #1 Adrenal gland [MA:0000116]
HOM M #2 Knee joint [MA:0000471]
HOM M #2 Skin [MA:0000151]
HOM F #3 Ear [MA:0000236]
HOM M #1 Tooth [MA:0000348]
HOM M #2 Thymus [MA:0000142]
HOM M #2 Tongue [MA:0000347]
HOM M #2 Lung [MA:0000415]
HOM F #3 Large intestine [MA:0000333]
HOM F #3 Sciatic nerve [MA:0001172]
HOM M #2 Trachea [MA:0000441]
HOM M #2 Lymph node [MA:0000139] 1 0 Mesenteric lymph node: Mild lymphoid hyperplasia
HOM M #1 Testis [MA:0000411]
HOM M #1 Gall bladder [MA:0000356]
HOM M #2 Seminal vesicle [MA:0000410]

Associated histopathology images

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