Histopathology data for Pdik1l

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #5 Tongue [MA:0000347]
HOM F #6 Adrenal gland [MA:0000116]
HOM M #7 Sternum [MA:0001331]
HOM M #3 Thyroid
HOM M #3 Adrenal gland [MA:0000116]
HOM M #5 Lung [MA:0000415] 1 0 mild multifocal perivascular lymphocytic infiltrates
HOM F #6 Kidney [MA:0000368]
HOM M #3 Kidney [MA:0000368]
HOM F #4 Stomach [MA:0000353]
HOM F #8 Lung [MA:0000415] 1 0 mild multifocal perivascular lymphocytic infiltrates
HOM M #3 Bone marrow [MA:0000134]
HOM M #5 Large intestine [MA:0000333]
HOM M #1 Small intestine [MA:0000337]
HOM F #6 Bone marrow [MA:0000134]
HOM F #8 Tongue [MA:0000347]
HOM F #2 Spinal cord [MA:0000216]
HOM F #8 Sternum [MA:0001331]
HOM M #7 Knee joint [MA:0000471] 1 0 mild osteoarthrosis with synovial hyperplasia
HOM M #3 Eye [MA:0000261]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #6 Skeletal muscle [MA:0003148]
HOM F #8 Nasal cavity [MA:0000284]
HOM M #7 Lymph node [MA:0000139]
HOM M #7 Tongue [MA:0000347]
HOM M #5 Gall bladder [MA:0000356]
HOM M #5 Testis [MA:0000411]
HOM F #6 Spleen [MA:0000141]
HOM M #3 Spleen [MA:0000141]
HOM M #1 Femur [MA:0001359]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #1 Salivary gland [MA:0000346]
HOM F #4 Eye [MA:0000261] 3 0 unilateral Broad anterior synechiae with anterior chamber collapse, angle closure, pigment dispersion, iris atrophy, ganglion cell loss and cataract formation
HOM F #2 Femur [MA:0001359]
HOM M #5 Urinary bladder [MA:0000380]
HOM M #5 Epididymis [MA:0000397]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Lung [MA:0000415]
HOM M #7 Nasal cavity [MA:0000284]
HOM F #2 Tongue [MA:0000347]
HOM F #4 Liver [MA:0000358]
HOM M #3 Stomach [MA:0000353]
HOM F #6 Heart [MA:0000072]
HOM F #2 Large intestine [MA:0000333]
HOM F #4 Uterus [MA:0000389] 1 0 Cystic endometrial hyperplasia
HOM F #6 Trigeminal V ganglion [MA:0001080]
HOM M #5 Ear [MA:0000236]
HOM F #4 Sciatic nerve [MA:0001172]
HOM F #4 Spleen [MA:0000141] 2 0 Mantle to marginal zone hyperplasia with extramedullary hematopoiesis
HOM M #7 Gall bladder [MA:0000356]
HOM M #5 Salivary gland [MA:0000346]
HOM M #7 Testis [MA:0000411] 2 0 unilateral unilateral chronic atrophy with sperm stasis, tubular ectasia and mineralization
HOM F #8 Tibia [MA:0001361]
HOM M #5 Femur [MA:0001359]
HOM F #6 Trachea [MA:0000441]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #1 Tooth [MA:0000348]
HOM F #2 Small intestine [MA:0000337]
HOM F #6 Thyroid
HOM M #1 Epididymis [MA:0000397]
HOM M #7 Tibia [MA:0001361]
HOM M #1 Bone marrow [MA:0000134]
HOM F #8 Gall bladder [MA:0000356]
HOM F #2 Pancreas [MA:0000120]
HOM M #5 Small intestine [MA:0000337]
HOM M #1 Sciatic nerve [MA:0001172]
HOM M #7 Urinary bladder [MA:0000380]
HOM F #2 Ovary [MA:0000384]
HOM M #5 Seminal vesicle [MA:0000410]
HOM M #3 Tooth [MA:0000348]
HOM M #1 Lung [MA:0000415]
HOM M #7 Liver [MA:0000358]
HOM M #7 Epididymis [MA:0000397] 2 0 unilateral Unilateral chronic epididymitis with periductular fibrosis and sperm stasis
HOM M #7 Esophagus [MA:0000352]
HOM M #1 Large intestine [MA:0000333]
HOM F #8 Brown adipose tissue [MA:0000057]
HOM F #8 Salivary gland [MA:0000346]
HOM F #6 Femur [MA:0001359]
HOM F #4 Mammary gland [MA:0000145]
HOM F #6 Tooth [MA:0000348]
HOM M #7 Tooth [MA:0000348]
HOM M #5 Tibia [MA:0001361]
HOM M #3 Salivary gland [MA:0000346]
HOM M #1 Spleen [MA:0000141]
HOM F #2 Sternum [MA:0001331]
HOM M #3 Tibia [MA:0001361]
HOM F #6 Brain [MA:0000168]
HOM F #4 Bone marrow [MA:0000134] 2 0 Moderate multifocal to coalescing fibro-osseous hyperplasia and steatosis with replacement of hematopoietic tissue
HOM F #4 Small intestine [MA:0000337]
HOM F #6 Tibia [MA:0001361]
HOM F #6 Skin [MA:0000151]
HOM M #3 Pancreas [MA:0000120]
HOM M #7 Stomach [MA:0000353]
HOM M #5 Pancreas [MA:0000120]
HOM M #5 Thymus [MA:0000142]
HOM M #1 Nasal cavity [MA:0000284]
HOM M #5 Tooth [MA:0000348]
HOM F #6 Liver [MA:0000358]
HOM F #4 Ovary [MA:0000384]
HOM M #1 Sternum [MA:0001331]
HOM M #3 Small intestine [MA:0000337]
HOM F #6 Urinary bladder [MA:0000380]
HOM F #4 Thymus [MA:0000142] 2 0 Lymphofollicular hyperplasia
HOM F #8 Ovary [MA:0000384]
HOM F #8 Spinal cord [MA:0000216]
HOM M #3 Thymus [MA:0000142]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #2 Tooth [MA:0000348]
HOM F #8 Thymus [MA:0000142]
HOM M #1 Spinal cord [MA:0000216]
HOM M #3 Spinal cord [MA:0000216]
HOM F #4 Kidney [MA:0000368]
HOM M #7 Brain [MA:0000168]
HOM M #1 Ear [MA:0000236]
HOM M #5 Prostate gland [MA:0000404]
HOM M #5 Spinal cord [MA:0000216]
HOM M #5 Kidney [MA:0000368]
HOM F #2 Tibia [MA:0001361]
HOM M #1 Prostate gland [MA:0000404]
HOM F #4 Tibia [MA:0001361]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #5 Nasal cavity [MA:0000284]
HOM M #1 Kidney [MA:0000368]
HOM F #8 Mammary gland [MA:0000145]
HOM M #7 Skin [MA:0000151]
HOM F #8 Large intestine [MA:0000333]
HOM F #8 Spleen [MA:0000141]
HOM F #4 Sternum [MA:0001331]
HOM F #6 Stomach [MA:0000353]
HOM M #1 Pancreas [MA:0000120]
HOM F #8 Uterus [MA:0000389] 1 0 Cystic endometrial hyperplasia
HOM F #2 Bone marrow [MA:0000134]
HOM M #7 Femur [MA:0001359]
HOM F #8 Small intestine [MA:0000337]
HOM M #1 Thymus [MA:0000142]
HOM M #5 Sternum [MA:0001331]
HOM F #8 Pancreas [MA:0000120] 1 0 mild multifocal chronic lymphoplasmacytic pancreatitis
HOM M #3 Prostate gland [MA:0000404]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #7 Bone marrow [MA:0000134]
HOM M #1 Brain [MA:0000168]
HOM F #4 Spinal cord [MA:0000216]
HOM M #3 Gall bladder [MA:0000356]
HOM F #8 Sciatic nerve [MA:0001172]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #1 Skin [MA:0000151]
HOM F #8 Adrenal gland [MA:0000116]
HOM M #7 Skeletal muscle [MA:0003148]
HOM M #1 Tibia [MA:0001361]
HOM F #8 Kidney [MA:0000368]
HOM F #2 Heart [MA:0000072]
HOM F #2 Stomach [MA:0000353]
HOM M #3 Lung [MA:0000415]
HOM M #5 Sciatic nerve [MA:0001172]
HOM F #6 Sternum [MA:0001331]
HOM M #3 Sternum [MA:0001331]
HOM M #7 Prostate gland [MA:0000404]
HOM M #7 Thyroid
HOM F #4 Urinary bladder [MA:0000380]
HOM F #4 Lung [MA:0000415] 1 0 Minimal multifocal perivascular lymphocytic infiltrates
HOM F #4 Tongue [MA:0000347]
HOM F #6 Large intestine [MA:0000333]
HOM F #2 Esophagus [MA:0000352]
HOM M #3 Large intestine [MA:0000333]
HOM M #3 Testis [MA:0000411]
HOM M #5 Bone marrow [MA:0000134]
HOM F #6 Gall bladder [MA:0000356]
HOM M #7 Trachea [MA:0000441]
HOM F #4 Pancreas [MA:0000120]
HOM M #1 Esophagus [MA:0000352]
HOM M #7 Sciatic nerve [MA:0001172]
HOM M #7 Kidney [MA:0000368] 1 0 Chronic lymphocytic pyelitis
HOM M #5 Eye [MA:0000261] 1 0 bilateral bilateral superficial cortical cataract
HOM F #8 Thyroid
HOM F #4 Tooth [MA:0000348]
HOM M #7 Eye [MA:0000261] 1 0 bilateral bilateral superficial cortical cataracts
HOM M #1 Heart [MA:0000072]
HOM M #3 Ear [MA:0000236]
HOM M #1 Stomach [MA:0000353]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM M #5 Skeletal muscle [MA:0003148]
HOM F #2 Thyroid
HOM F #6 Nasal cavity [MA:0000284]
HOM F #8 Trigeminal V ganglion [MA:0001080]
HOM F #4 Salivary gland [MA:0000346]
HOM F #6 Thymus [MA:0000142]
HOM M #5 Stomach [MA:0000353]
HOM M #7 Bone [MA:0001459]
HOM F #4 Femur [MA:0001359]
HOM F #6 Ovary [MA:0000384]
HOM F #6 Spinal cord [MA:0000216]
HOM F #6 Knee joint [MA:0000471]
HOM F #2 Uterus [MA:0000389]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM F #2 Kidney [MA:0000368]
HOM F #8 Esophagus [MA:0000352]
HOM F #8 Heart [MA:0000072]
HOM M #5 Spleen [MA:0000141]
HOM F #8 Stomach [MA:0000353]
HOM F #8 Eye [MA:0000261] 1 0 superficial cortical cataract
HOM F #2 Mammary gland [MA:0000145]
HOM F #6 Lung [MA:0000415]
HOM F #8 Bone marrow [MA:0000134]
HOM M #3 Epididymis [MA:0000397]
HOM F #4 Large intestine [MA:0000333]
HOM F #6 Tongue [MA:0000347]
HOM F #2 Spleen [MA:0000141]
HOM M #7 Trigeminal V ganglion [MA:0001080]
HOM M #1 Eye [MA:0000261]
HOM F #2 Liver [MA:0000358]
HOM M #7 Heart [MA:0000072]
HOM F #6 Lymph node [MA:0000139]
HOM F #2 Brain [MA:0000168]
HOM M #7 Adrenal gland [MA:0000116]
HOM F #2 Thymus [MA:0000142]
HOM F #2 Skin [MA:0000151]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #9 Eye [MA:0000261]
HOM F #8 Femur [MA:0001359]
HOM F #8 Skin [MA:0000151]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #5 Brain [MA:0000168]
HOM M #1 Thyroid
HOM M #1 Tongue [MA:0000347]
HOM M #1 Testis [MA:0000411]
HOM F #6 Pancreas [MA:0000120]
HOM M #3 Skin [MA:0000151]
HOM M #1 Gall bladder [MA:0000356]
HOM F #6 Brown adipose tissue [MA:0000057]
HOM F #8 Tooth [MA:0000348]
HOM M #7 Salivary gland [MA:0000346] 1 0 Mild lymphocytic infiltrates
HOM F #4 Bone [MA:0001459]
HOM F #4 Lymph node [MA:0000139]
HOM F #4 Knee joint [MA:0000471]
HOM M #7 Pancreas [MA:0000120]
HOM M #3 Femur [MA:0001359]
HOM F #6 Esophagus [MA:0000352]
HOM F #2 Ear [MA:0000236]
HOM F #2 Trachea [MA:0000441]
HOM F #2 Lymph node [MA:0000139]
HOM F #6 Salivary gland [MA:0000346]
HOM F #2 Knee joint [MA:0000471]
HOM M #5 Brown adipose tissue [MA:0000057]
HOM F #4 Trachea [MA:0000441]
HOM M #3 Esophagus [MA:0000352]
HOM M #7 Spinal cord [MA:0000216]
HOM F #6 Uterus [MA:0000389] 1 0 Hydrometra
HOM M #1 Adrenal gland [MA:0000116]
HOM F #4 Brain [MA:0000168]
HOM M #5 Liver [MA:0000358]
HOM M #3 Liver [MA:0000358]
HOM M #7 Brown adipose tissue [MA:0000057]
HOM M #5 Skin [MA:0000151] 1 0 multifocal follicular atrophy with alopecia
HOM F #6 Mammary gland [MA:0000145]
HOM F #8 Bone [MA:0001459]
HOM M #3 Brain [MA:0000168]
HOM F #4 Skin [MA:0000151]
HOM F #4 Skeletal muscle [MA:0003148]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #6 Small intestine [MA:0000337]
HOM F #2 Gall bladder [MA:0000356]
HOM M #1 Lymph node [MA:0000139]
HOM F #8 Knee joint [MA:0000471]
HOM M #5 Trachea [MA:0000441]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #5 Esophagus [MA:0000352]
HOM M #5 Heart [MA:0000072]
HOM F #4 Adrenal gland [MA:0000116]
HOM M #7 Seminal vesicle [MA:0000410]
HOM F #4 Gall bladder [MA:0000356]
HOM M #1 Trachea [MA:0000441]
HOM F #6 Ear [MA:0000236]
HOM M #3 Knee joint [MA:0000471]
HOM F #4 Thyroid
HOM M #1 Skeletal muscle [MA:0003148]
HOM M #5 Trigeminal V ganglion [MA:0001080]
HOM M #7 Lung [MA:0000415]
HOM M #1 Knee joint [MA:0000471]
HOM F #2 Adrenal gland [MA:0000116]
HOM M #5 Knee joint [MA:0000471]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #6 Eye [MA:0000261]
HOM M #1 Urinary bladder [MA:0000380]
HOM M #3 Heart [MA:0000072]
HOM F #8 Lymph node [MA:0000139]
HOM F #8 Trachea [MA:0000441]
HOM M #5 Lymph node [MA:0000139]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #7 Thymus [MA:0000142]
HOM F #4 Esophagus [MA:0000352]
HOM M #3 Trachea [MA:0000441]
HOM F #2 Eye [MA:0000261]
HOM M #3 Tongue [MA:0000347]
HOM M #1 Liver [MA:0000358]
HOM F #8 Urinary bladder [MA:0000380]
HOM M #5 Adrenal gland [MA:0000116]
HOM M #3 Lymph node [MA:0000139]
HOM F #4 Heart [MA:0000072]
HOM M #5 Bone [MA:0001459]
HOM F #8 Skeletal muscle [MA:0003148]
HOM F #4 Trigeminal V ganglion [MA:0001080]
HOM M #7 Small intestine [MA:0000337]
HOM M #5 Thyroid
HOM F #6 Sciatic nerve [MA:0001172]
HOM M #7 Spleen [MA:0000141]
HOM F #8 Liver [MA:0000358]
HOM M #7 Ear [MA:0000236]
HOM M #7 Large intestine [MA:0000333]
HOM F #8 Brain [MA:0000168]

Associated histopathology images

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