Histopathology data for Nell1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #3 Bone marrow [MA:0000134]
HOM M #4 Testis [MA:0000411]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #3 Esophagus [MA:0000352]
HOM F #2 Esophagus [MA:0000352]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM M #3 Skeletal muscle [MA:0003148]
HOM M #3 Sciatic nerve [MA:0001172]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM F #1 Knee joint [MA:0000471]
HOM M #3 Skin [MA:0000151]
HOM F #2 Uterus [MA:0000389]
HOM F #1 Bone [MA:0001459]
HOM M #3 Eye [MA:0000261] 1 0 Eye: Focal, mild retinal dysplasia
HOM F #2 Heart [MA:0000072]
HOM F #2 Tongue [MA:0000347]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #1 Tooth [MA:0000348]
HOM M #4 Knee joint [MA:0000471]
HOM M #4 Salivary gland [MA:0000346]
HOM F #2 Bone marrow [MA:0000134]
HOM F #2 Skin [MA:0000151]
HOM M #3 Heart [MA:0000072]
HOM F #2 Eye [MA:0000261]
HOM M #4 Tooth [MA:0000348]
HOM F #1 Thyroid
HOM F #2 Trachea [MA:0000441]
HOM F #1 Gall bladder [MA:0000356]
HOM M #3 Lung [MA:0000415]
HOM M #4 Bone [MA:0001459]
HOM M #4 Thymus [MA:0000142]
HOM F #2 Lymph node [MA:0000139]
HOM M #4 Gall bladder [MA:0000356]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #3 Tongue [MA:0000347]
HOM M #4 Thyroid
HOM F #2 Stomach [MA:0000353]
HOM M #3 Prostate gland [MA:0000404]
HOM F #2 Lung [MA:0000415]
HOM F #1 Pancreas [MA:0000120]
HOM M #4 Pancreas [MA:0000120]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #3 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, paracortical lymphoid hyperplasia
HOM F #2 Brain [MA:0000168]
HOM M #3 Salivary gland [MA:0000346]
HOM M #3 Stomach [MA:0000353]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Brain [MA:0000168]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Knee joint [MA:0000471]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #3 Sternum [MA:0001331]
HOM M #3 Kidney [MA:0000368]
HOM F #2 Bone [MA:0001459]
HOM M #4 Eye [MA:0000261]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Esophagus [MA:0000352]
HOM M #3 Knee joint [MA:0000471]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM M #3 Spleen [MA:0000141]
HOM M #3 Tooth [MA:0000348]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Spinal cord [MA:0000216]
HOM F #1 Bone marrow [MA:0000134]
HOM F #1 Tibia [MA:0001361]
HOM M #3 Epididymis [MA:0000397]
HOM F #1 Uterus [MA:0000389]
HOM F #2 Ovary [MA:0000384]
HOM M #4 Heart [MA:0000072]
HOM M #3 Femur [MA:0001359]
HOM F #1 Brain [MA:0000168]
HOM M #3 Pancreas [MA:0000120]
HOM F #1 Tongue [MA:0000347]
HOM M #4 Liver [MA:0000358]
HOM F #1 Salivary gland [MA:0000346]
HOM F #1 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, follicular and paracortical lymphoid hyperplasia
HOM F #2 Ear [MA:0000236]
HOM F #1 Small intestine [MA:0000337]
HOM M #4 Lung [MA:0000415]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #2 Large intestine [MA:0000333]
HOM M #3 Thyroid
HOM M #3 Gall bladder [MA:0000356]
HOM M #4 Large intestine [MA:0000333]
HOM F #1 Sternum [MA:0001331]
HOM F #1 Spleen [MA:0000141]
HOM M #4 Spleen [MA:0000141]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #1 Large intestine [MA:0000333]
HOM F #2 Thymus [MA:0000142]
HOM M #4 Stomach [MA:0000353]
HOM F #2 Mammary gland [MA:0000145]
HOM M #4 Sternum [MA:0001331]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #1 Kidney [MA:0000368]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #3 Thymus [MA:0000142]
HOM M #3 Tibia [MA:0001361]
HOM M #3 Spinal cord [MA:0000216]
HOM F #2 Liver [MA:0000358]
HOM F #2 Tibia [MA:0001361]
HOM F #2 Spinal cord [MA:0000216]
HOM M #3 Liver [MA:0000358]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #2 Pancreas [MA:0000120]
HOM M #4 Prostate gland [MA:0000404]
HOM M #4 Ear [MA:0000236]
HOM F #1 Femur [MA:0001359]
HOM F #1 Ear [MA:0000236]
HOM F #1 Ovary [MA:0000384]
HOM M #4 Seminal vesicle [MA:0000410]
HOM F #1 Skin [MA:0000151]
HOM M #3 Small intestine [MA:0000337]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #4 Bone marrow [MA:0000134]
HOM M #4 Femur [MA:0001359]
HOM M #4 Epididymis [MA:0000397]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #4 Skin [MA:0000151]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Small intestine [MA:0000337]
HOM F #2 Tooth [MA:0000348]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #4 Esophagus [MA:0000352]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #1 Eye [MA:0000261]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Mammary gland [MA:0000145]
HOM M #3 Testis [MA:0000411]
HOM F #1 Liver [MA:0000358]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #2 Sternum [MA:0001331]
HOM F #2 Kidney [MA:0000368]
HOM M #3 Bone [MA:0001459]
HOM F #2 Femur [MA:0001359]
HOM M #4 Brain [MA:0000168]
HOM F #2 Gall bladder [MA:0000356]
HOM F #2 Thyroid
HOM M #4 Small intestine [MA:0000337]
HOM F #1 Heart [MA:0000072]
HOM M #4 Tibia [MA:0001361]
HOM F #1 Stomach [MA:0000353]
HOM F #2 Spleen [MA:0000141]
HOM M #4 Kidney [MA:0000368]
HOM M #3 Large intestine [MA:0000333]
HOM M #4 Adrenal gland [MA:0000116] 3 0 Adrenal gland, bilateral: Severe, diffuse, cortical atrophy
HOM M #3 Ear [MA:0000236]
HOM M #4 Lymph node [MA:0000139]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #4 Tongue [MA:0000347]
HOM F #1 Lung [MA:0000415]
HOM F #1 Trachea [MA:0000441]
HOM F #2 Trigeminal V ganglion [MA:0001080]

Associated histopathology images

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