Histopathology data for Eme1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #1 Stomach [MA:0000353] 0 0
HOM F #1 Spleen [MA:0000141] 0 0
HOM M #4 Lymph node [MA:0000139] 0 0
HOM F #3 Ovary [MA:0000384] 0 0
HOM M #4 Femur [MA:0001359] 0 0
HOM M #2 Stomach [MA:0000353] 0 0
HOM M #4 Salivary gland [MA:0000346] 0 0
HOM F #3 Epididymis [MA:0000397] Not applicable
HOM M #2 Skeletal muscle [MA:0003148] 0 0
HOM M #2 Spleen [MA:0000141] 0 0
HOM F #3 Stomach [MA:0000353] 0 0
HOM M #4 Spleen [MA:0000141] 0 0
HOM F #1 Lymph node [MA:0000139] 0 0
HOM F #3 Skeletal muscle [MA:0003148] 0 0
HOM F #1 Femur [MA:0001359] 0 0
HOM F #1 Salivary gland [MA:0000346] 0 0
HOM M #4 Small intestine [MA:0000337] 0 0
HOM M #2 Uterus [MA:0000389] Not applicable
HOM F #3 Trachea [MA:0000441] 0 0
HOM M #2 Femur [MA:0001359] 0 0
HOM F #3 Kidney [MA:0000368] 0 0
HOM F #3 Femur [MA:0001359] 0 0
HOM M #2 Seminal vesicle [MA:0000410] 0 0
HOM F #3 Uterus [MA:0000389] 0 0
HOM M #4 Heart [MA:0000072] 0 0
HOM F #1 Skeletal muscle [MA:0003148] 0 0
HOM M #4 Skeletal muscle [MA:0003148] 0 0
HOM F #1 Esophagus [MA:0000352] 0 0
HOM M #4 Eye [MA:0000261] 0 0
HOM M #2 Epididymis [MA:0000397] 0 0
HOM M #2 Gall bladder [MA:0000356] 0 0
HOM M #2 Brain [MA:0000168] 0 0
HOM F #1 Heart [MA:0000072] 0 0
HOM M #2 Ovary [MA:0000384] Not applicable
HOM F #3 Heart [MA:0000072] 0 0
HOM M #2 Spinal cord [MA:0000216] 0 0
HOM F #3 Esophagus [MA:0000352] 0 0
HOM M #2 Large intestine [MA:0000333] 0 0
HOM F #3 Small intestine [MA:0000337] 0 0
HOM F #1 Kidney [MA:0000368] 0 0
HOM M #4 Trachea [MA:0000441] 0 0
HOM M #2 Small intestine [MA:0000337] 0 0
HOM M #2 Liver [MA:0000358] 0 0
HOM F #3 Thyroid 0 0
HOM M #2 Thyroid 0 0
HOM M #2 Salivary gland [MA:0000346] 0 0
HOM M #4 Pancreas [MA:0000120] 0 0
HOM F #3 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Kidney [MA:0000368] 0 0
HOM F #1 Trachea [MA:0000441] 0 0
HOM F #3 Liver [MA:0000358] 0 0
HOM M #2 Trachea [MA:0000441] 0 0
HOM F #3 Brain [MA:0000168] 0 0
HOM F #1 Epididymis [MA:0000397] Not applicable
HOM F #1 Prostate gland [MA:0000404] Not applicable
HOM M #4 Large intestine [MA:0000333] 0 0
HOM M #2 Kidney [MA:0000368] 0 0
HOM F #3 Spleen [MA:0000141] 0 0
HOM M #4 Stomach [MA:0000353] 0 0
HOM M #2 Heart [MA:0000072] 2 0 localized chronic Right ventricular epicardial fibrosis, focal
HOM M #4 Spinal cord [MA:0000216] 0 0
HOM F #3 Gall bladder [MA:0000356] 0 0
HOM M #4 Epididymis [MA:0000397] 0 0
HOM F #1 Spinal cord [MA:0000216] 0 0
HOM F #3 Bone marrow [MA:0000134] 0 0
HOM F #3 Thymus [MA:0000142] 0 0
HOM F #3 Seminal vesicle [MA:0000410] Not applicable
HOM M #4 Prostate gland [MA:0000404] 0 0
HOM F #1 Large intestine [MA:0000333] 0 0
HOM F #1 Mammary gland [MA:0000145] 0 0
HOM M #2 Lung [MA:0000415] 0 0
HOM M #4 Sciatic nerve [MA:0001172] 0 0
HOM F #1 Adrenal gland [MA:0000116] 0 0
HOM F #3 Lung [MA:0000415] 0 0
HOM M #2 Skin [MA:0000151] 0 0
HOM M #2 Mammary gland [MA:0000145] Not applicable
HOM F #1 Bone marrow [MA:0000134] 0 0
HOM M #4 Urinary bladder [MA:0000380] 0 0
HOM M #2 Bone marrow [MA:0000134] 0 0
HOM M #2 Pancreas [MA:0000120] 0 0
HOM F #1 Testis [MA:0000411] Not applicable
HOM M #4 Adrenal gland [MA:0000116] 0 0
HOM F #1 Urinary bladder [MA:0000380] 0 0
HOM M #4 Bone marrow [MA:0000134] 0 0
HOM F #1 Skin [MA:0000151] 0 0
HOM F #3 Optic II nerve [MA:0001097] 0 0
HOM F #3 Prostate gland [MA:0000404] Not applicable
HOM M #4 Thymus [MA:0000142] 0 0
HOM F #1 Optic II nerve [MA:0001097] 0 0
HOM M #4 Testis [MA:0000411] 0 0
HOM M #2 Optic II nerve [MA:0001097] 0 0
HOM F #3 Mammary gland [MA:0000145] 0 0
HOM F #3 Skin [MA:0000151] 0 0
HOM M #2 Urinary bladder [MA:0000380] 0 0
HOM M #4 Skin [MA:0000151] 0 0
HOM F #3 Testis [MA:0000411] Not applicable
HOM M #2 Prostate gland [MA:0000404] 0 0
HOM F #3 Urinary bladder [MA:0000380] 0 0
HOM F #1 Pancreas [MA:0000120] 0 0
HOM F #3 Eye [MA:0000261] 0 0
HOM M #4 Thyroid 0 0
HOM M #4 Optic II nerve [MA:0001097] 0 0
HOM M #2 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Liver [MA:0000358] 0 0
HOM M #2 Thymus [MA:0000142] 0 0
HOM M #4 Mammary gland [MA:0000145] Not applicable
HOM M #2 Adrenal gland [MA:0000116] 0 0
HOM F #3 Pancreas [MA:0000120] 0 0
HOM F #1 Eye [MA:0000261] 0 0
HOM M #4 Uterus [MA:0000389] Not applicable
HOM F #3 Large intestine [MA:0000333] 0 0
HOM F #1 Liver [MA:0000358] 0 0
HOM M #4 Esophagus [MA:0000352] 0 0
HOM M #4 Seminal vesicle [MA:0000410] 0 0
HOM M #4 Brain [MA:0000168] 0 0
HOM M #4 Gall bladder [MA:0000356] 0 0
HOM F #1 Small intestine [MA:0000337] 0 0
HOM F #3 Salivary gland [MA:0000346] 0 0
HOM F #1 Thyroid 0 0
HOM F #1 Uterus [MA:0000389] 0 0
HOM F #3 Lymph node [MA:0000139] 0 0
HOM M #2 Esophagus [MA:0000352] 0 0
HOM F #1 Thymus [MA:0000142] 0 0
HOM M #2 Lymph node [MA:0000139] 0 0
HOM F #3 Spinal cord [MA:0000216] 0 0
HOM F #1 Seminal vesicle [MA:0000410] Not applicable
HOM M #2 Testis [MA:0000411] 0 0
HOM F #1 Sciatic nerve [MA:0001172] 0 0
HOM F #1 Lung [MA:0000415] 0 0
HOM F #1 Ovary [MA:0000384] 0 0
HOM F #3 Adrenal gland [MA:0000116] 0 0
HOM M #4 Ovary [MA:0000384] Not applicable
HOM F #1 Brain [MA:0000168] 0 0
HOM F #1 Gall bladder [MA:0000356] 0 0
HOM M #2 Eye [MA:0000261] 0 0
HOM M #4 Lung [MA:0000415] 0 0

Associated histopathology images

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