Histopathology data for Col17a1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #2 Ear [MA:0000236]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #2 Tongue [MA:0000347]
HOM M #3 Small intestine [MA:0000337]
HOM M #2 Brain [MA:0000168]
HOM M #2 Heart [MA:0000072]
HOM F #1 Pancreas [MA:0000120]
HOM F #1 Tooth [MA:0000348]
HOM M #3 Thymus [MA:0000142]
HOM F #4 Adrenal gland [MA:0000116]
HOM F #4 Urinary bladder [MA:0000380]
HOM M #3 Liver [MA:0000358]
HOM M #2 Skin [MA:0000151]
HOM M #3 Tibia [MA:0001361]
HOM F #1 Bone [MA:0001459]
HOM M #2 Lung [MA:0000415]
HOM M #2 Stomach [MA:0000353]
HOM M #2 Skeletal muscle [MA:0003148]
HOM F #4 Sternum [MA:0001331]
HOM M #2 Sciatic nerve [MA:0001172]
HOM M #2 Bone marrow [MA:0000134]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM M #2 Eye [MA:0000261]
HOM M #2 Esophagus [MA:0000352]
HOM M #3 Spinal cord [MA:0000216]
HOM M #3 Pancreas [MA:0000120]
HOM M #2 Sternum [MA:0001331]
HOM M #3 Femur [MA:0001359]
HOM M #2 Seminal vesicle [MA:0000410]
HOM F #4 Spinal cord [MA:0000216]
HOM M #2 Urinary bladder [MA:0000380]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM F #4 Mammary gland [MA:0000145]
HOM F #4 Ovary [MA:0000384]
HOM F #4 Thymus [MA:0000142]
HOM F #4 Femur [MA:0001359]
HOM F #1 Thyroid
HOM M #2 Prostate gland [MA:0000404]
HOM F #1 Gall bladder [MA:0000356]
HOM M #3 Tooth [MA:0000348]
HOM F #4 Tongue [MA:0000347]
HOM F #1 Lymph node [MA:0000139]
HOM M #2 Thyroid
HOM F #4 Uterus [MA:0000389]
HOM M #3 Sternum [MA:0001331]
HOM M #2 Salivary gland [MA:0000346]
HOM M #3 Epididymis [MA:0000397]
HOM M #2 Femur [MA:0001359]
HOM M #2 Epididymis [MA:0000397]
HOM M #3 Large intestine [MA:0000333]
HOM F #1 Bone marrow [MA:0000134]
HOM F #1 Sciatic nerve [MA:0001172]
HOM M #3 Knee joint [MA:0000471]
HOM M #2 Adrenal gland [MA:0000116]
HOM F #4 Small intestine [MA:0000337]
HOM F #1 Esophagus [MA:0000352]
HOM M #2 Lymph node [MA:0000139]
HOM F #4 Brain [MA:0000168]
HOM M #3 Lung [MA:0000415]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM F #1 Uterus [MA:0000389] 3 0 pyometra
HOM F #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Tibia [MA:0001361]
HOM F #1 Brain [MA:0000168]
HOM F #1 Salivary gland [MA:0000346]
HOM F #1 Small intestine [MA:0000337]
HOM M #3 Heart [MA:0000072]
HOM F #4 Spleen [MA:0000141]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #4 Lymph node [MA:0000139]
HOM M #2 Kidney [MA:0000368]
HOM F #1 Tongue [MA:0000347]
HOM F #4 Kidney [MA:0000368]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Stomach [MA:0000353]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #4 Tibia [MA:0001361]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #2 Spleen [MA:0000141]
HOM F #1 Large intestine [MA:0000333]
HOM M #3 Esophagus [MA:0000352]
HOM M #3 Bone marrow [MA:0000134]
HOM F #4 Thyroid
HOM F #1 Spleen [MA:0000141]
HOM M #2 Tibia [MA:0001361]
HOM F #1 Sternum [MA:0001331]
HOM M #2 Liver [MA:0000358]
HOM M #2 Small intestine [MA:0000337]
HOM F #4 Salivary gland [MA:0000346]
HOM F #1 Kidney [MA:0000368]
HOM M #2 Pancreas [MA:0000120]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM F #4 Knee joint [MA:0000471]
HOM F #4 Trachea [MA:0000441]
HOM F #4 Gall bladder [MA:0000356]
HOM M #3 Gall bladder [MA:0000356]
HOM F #4 Bone marrow [MA:0000134]
HOM F #1 Ear [MA:0000236]
HOM M #3 Thyroid
HOM F #1 Skin [MA:0000151]
HOM F #4 Sciatic nerve [MA:0001172]
HOM M #3 Ear [MA:0000236]
HOM F #1 Ovary [MA:0000384]
HOM M #2 Spinal cord [MA:0000216]
HOM F #4 Tooth [MA:0000348]
HOM F #4 Skeletal muscle [MA:0003148]
HOM M #2 Knee joint [MA:0000471]
HOM M #3 Eye [MA:0000261]
HOM F #4 Skin [MA:0000151]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #2 Tooth [MA:0000348]
HOM F #4 Bone [MA:0001459]
HOM M #2 Bone [MA:0001459]
HOM M #3 Skin [MA:0000151]
HOM F #4 Eye [MA:0000261]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #2 Thymus [MA:0000142]
HOM F #4 Pancreas [MA:0000120]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #4 Esophagus [MA:0000352]
HOM M #2 Testis [MA:0000411]
HOM M #3 Kidney [MA:0000368]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #4 Lung [MA:0000415]
HOM M #3 Salivary gland [MA:0000346]
HOM F #1 Eye [MA:0000261]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #4 Stomach [MA:0000353]
HOM M #3 Testis [MA:0000411]
HOM F #1 Femur [MA:0001359]
HOM M #3 Bone [MA:0001459]
HOM M #2 Trachea [MA:0000441]
HOM F #1 Spinal cord [MA:0000216]
HOM M #3 Spleen [MA:0000141]
HOM F #4 Large intestine [MA:0000333]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #1 Mammary gland [MA:0000145]
HOM M #2 Nasal cavity [MA:0000284]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Liver [MA:0000358]
HOM F #1 Heart [MA:0000072]
HOM M #3 Prostate gland [MA:0000404]
HOM M #3 Tongue [MA:0000347]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #3 Brain [MA:0000168]
HOM M #2 Large intestine [MA:0000333]
HOM F #1 Knee joint [MA:0000471]
HOM F #1 Lung [MA:0000415]
HOM M #3 Lymph node [MA:0000139]
HOM F #1 Stomach [MA:0000353]
HOM F #4 Liver [MA:0000358]
HOM F #4 Heart [MA:0000072]
HOM M #3 Adrenal gland [MA:0000116]
HOM F #1 Trachea [MA:0000441]

Associated histopathology images

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