Histopathology data for Btnl4

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #1 Urinary bladder [MA:0000380] 0 0
HOM F #1 Lymph node [MA:0000139] 0 0
HOM F #1 Ovary [MA:0000384] 0 0
HOM F #2 Heart [MA:0000072] 0 0
HOM M #4 Bone marrow [MA:0000134] 0 0
HOM F #2 Seminal vesicle [MA:0000410] Not applicable
HOM M #3 Pancreas [MA:0000120] 0 0
HOM M #4 Esophagus [MA:0000352] 0 0
HOM F #2 Testis [MA:0000411] Not applicable
HOM M #3 Testis [MA:0000411] 0 0
HOM F #2 Brain [MA:0000168] 0 0
HOM F #2 Optic II nerve [MA:0001097] 0 0
HOM F #2 Urinary bladder [MA:0000380] 0 0
HOM F #2 Ovary [MA:0000384] 0 0
HOM F #1 Liver [MA:0000358] 0 0
HOM F #1 Brain [MA:0000168] 0 0
HOM M #3 Small intestine [MA:0000337] 0 0
HOM M #4 Ear [MA:0000236] 0 0
HOM M #3 Knee joint [MA:0000471] 0 0
HOM M #3 Salivary gland [MA:0000346] 0 0
HOM M #4 Uterus [MA:0000389] Not applicable
HOM F #1 Spleen [MA:0000141] 0 0
HOM M #4 Gall bladder [MA:0000356] 0 0
HOM F #2 Liver [MA:0000358] 0 0
HOM M #3 Brown adipose tissue [MA:0000057] 0 0
HOM M #4 Pituitary gland [MA:0000176] 0 0
HOM M #4 Thyroid 0 0
HOM M #3 Tooth [MA:0000348] 0 0
HOM M #4 Skeletal muscle [MA:0003148] 0 0
HOM F #2 Spleen [MA:0000141] 0 0
HOM M #4 Eye [MA:0000261] 0 0
HOM M #3 Mammary gland [MA:0000145] Not applicable
HOM M #3 Thymus [MA:0000142] 0 0
HOM M #4 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Skin [MA:0000151] 0 0
HOM M #3 Trachea [MA:0000441] 0 0
HOM M #4 Sternum [MA:0001331] 0 0
HOM F #1 Pituitary gland [MA:0000176] 0 0
HOM M #4 Large intestine [MA:0000333] 0 0
HOM F #2 Mammary gland [MA:0000145] 0 0
HOM M #3 Nasal cavity [MA:0000284] 0 0
HOM F #1 Lung [MA:0000415] 0 0
HOM M #3 Sciatic nerve [MA:0001172] 0 0
HOM F #1 Stomach [MA:0000353] 0 0
HOM F #1 Pancreas [MA:0000120] 0 0
HOM F #1 Sciatic nerve [MA:0001172] 0 0
HOM F #2 Thyroid 0 0
HOM M #4 Knee joint [MA:0000471] 0 0
HOM F #1 Ear [MA:0000236] 0 0
HOM F #1 Small intestine [MA:0000337] 0 0
HOM M #3 Pituitary gland [MA:0000176] 0 0
HOM F #2 Tibia [MA:0001361] 0 0
HOM M #4 Tooth [MA:0000348] 0 0
HOM F #2 Thymus [MA:0000142] 0 0
HOM F #2 Salivary gland [MA:0000346] 0 0
HOM F #1 Tooth [MA:0000348] 0 0
HOM M #4 Heart [MA:0000072] 0 0
HOM F #2 Bone marrow [MA:0000134] 0 0
HOM F #1 Large intestine [MA:0000333] 0 0
HOM F #2 Adrenal gland [MA:0000116] 0 0
HOM M #4 Liver [MA:0000358] 0 0
HOM M #4 Trachea [MA:0000441] 0 0
HOM F #2 Uterus [MA:0000389] 0 0
HOM F #2 White adipose tissue [MA:0000058] 0 0
HOM M #4 Stomach [MA:0000353] 0 0
HOM F #1 Seminal vesicle [MA:0000410] Not applicable
HOM F #1 Testis [MA:0000411] Not applicable
HOM M #4 Lung [MA:0000415] 0 0
HOM M #4 Nasal cavity [MA:0000284] 0 0
HOM F #1 Brown adipose tissue [MA:0000057] 0 0
HOM F #1 Eye [MA:0000261] 0 0
HOM M #3 Heart [MA:0000072] 0 0
HOM F #2 Skin [MA:0000151] 0 0
HOM F #1 Tongue [MA:0000347] 0 0
HOM F #1 Optic II nerve [MA:0001097] 0 0
HOM F #2 Trachea [MA:0000441] 0 0
HOM M #3 Liver [MA:0000358] 0 0
HOM F #1 Knee joint [MA:0000471] 0 0
HOM F #2 Kidney [MA:0000368] 0 0
HOM F #2 Sternum [MA:0001331] 0 0
HOM F #1 Uterus [MA:0000389] 0 0
HOM M #3 Stomach [MA:0000353] 0 0
HOM F #1 Gall bladder [MA:0000356] 0 0
HOM M #3 Prostate gland [MA:0000404] 0 0
HOM M #3 Lung [MA:0000415] 0 0
HOM F #1 Esophagus [MA:0000352] 0 0
HOM F #2 Tongue [MA:0000347] 0 0
HOM F #1 Sternum [MA:0001331] 0 0
HOM F #1 Skeletal muscle [MA:0003148] 0 0
HOM F #1 Thymus [MA:0000142] 0 0
HOM M #4 Small intestine [MA:0000337] 0 0
HOM M #3 Ear [MA:0000236] 0 0
HOM F #2 Esophagus [MA:0000352] 0 0
HOM F #1 Epididymis [MA:0000397] Not applicable
HOM F #2 Spinal cord [MA:0000216] 0 0
HOM F #2 Gall bladder [MA:0000356] 0 0
HOM F #2 Prostate gland [MA:0000404] Not applicable
HOM F #2 Epididymis [MA:0000397] Not applicable
HOM M #3 Large intestine [MA:0000333] 0 0
HOM M #3 Brain [MA:0000168] 0 0
HOM M #3 Skeletal muscle [MA:0003148] 0 0
HOM M #3 Seminal vesicle [MA:0000410] 0 0
HOM M #3 Urinary bladder [MA:0000380] 0 0
HOM F #1 Spinal cord [MA:0000216] 0 0
HOM M #3 Ovary [MA:0000384] Not applicable
HOM M #3 Epididymis [MA:0000397] 0 0
HOM M #3 Uterus [MA:0000389] Not applicable
HOM F #1 Prostate gland [MA:0000404] Not applicable
HOM F #1 Nasal cavity [MA:0000284] 0 0
HOM M #4 Mammary gland [MA:0000145] Not applicable
HOM F #2 Femur [MA:0001359] 0 0
HOM M #4 Thymus [MA:0000142] 0 0
HOM M #3 Skin [MA:0000151] 0 0
HOM M #3 Sternum [MA:0001331] 0 0
HOM M #4 Spinal cord [MA:0000216] 0 0
HOM M #4 Pancreas [MA:0000120] 0 0
HOM M #4 Femur [MA:0001359] 0 0
HOM M #3 Bone marrow [MA:0000134] 0 0
HOM F #1 Kidney [MA:0000368] 0 0
HOM M #4 Epididymis [MA:0000397] 0 0
HOM M #4 Ovary [MA:0000384] Not applicable
HOM M #3 Esophagus [MA:0000352] 0 0
HOM M #4 Brown adipose tissue [MA:0000057] 0 0
HOM F #1 Femur [MA:0001359] 0 0
HOM F #2 Skeletal muscle [MA:0003148] 0 0
HOM M #3 Spinal cord [MA:0000216] 0 0
HOM F #2 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Spleen [MA:0000141] 0 0
HOM F #1 Tibia [MA:0001361] 0 0
HOM M #3 Femur [MA:0001359] 0 0
HOM F #1 Thyroid 0 0
HOM M #3 Eye [MA:0000261] 0 0
HOM M #4 Kidney [MA:0000368] 0 0
HOM F #2 Ear [MA:0000236] 0 0
HOM F #2 Small intestine [MA:0000337] 0 0
HOM M #3 Lymph node [MA:0000139] 0 0
HOM M #3 White adipose tissue [MA:0000058] 0 0
HOM M #4 Urinary bladder [MA:0000380] 0 0
HOM M #4 Seminal vesicle [MA:0000410] 0 0
HOM M #4 Salivary gland [MA:0000346] 0 0
HOM M #4 Prostate gland [MA:0000404] 0 0
HOM M #3 Gall bladder [MA:0000356] 0 0
HOM F #2 Lung [MA:0000415] 0 0
HOM M #4 Testis [MA:0000411] 0 0
HOM F #2 Nasal cavity [MA:0000284] 0 0
HOM F #2 Stomach [MA:0000353] 2 0 multi-localised subacute Gastritis, suppurative.
HOM M #3 Thyroid 0 0
HOM M #4 Tongue [MA:0000347] 0 0
HOM M #3 Adrenal gland [MA:0000116] 0 0
HOM F #2 Brown adipose tissue [MA:0000057] 0 0
HOM M #3 Optic II nerve [MA:0001097] 0 0
HOM F #2 Eye [MA:0000261] 0 0
HOM M #4 Brain [MA:0000168] 0 0
HOM F #1 Skin [MA:0000151] 0 0
HOM F #1 Trachea [MA:0000441] 0 0
HOM M #4 Tibia [MA:0001361] 0 0
HOM M #3 Tongue [MA:0000347] 0 0
HOM F #1 Mammary gland [MA:0000145] 0 0
HOM F #1 Salivary gland [MA:0000346] 0 0
HOM F #2 Knee joint [MA:0000471] 0 0
HOM F #2 Lymph node [MA:0000139] 0 0
HOM M #3 Spleen [MA:0000141] 0 0
HOM F #1 Heart [MA:0000072] 0 0
HOM M #4 Adrenal gland [MA:0000116] 0 0
HOM M #3 Kidney [MA:0000368] 0 0
HOM F #1 White adipose tissue [MA:0000058] 0 0
HOM M #4 Optic II nerve [MA:0001097] 0 0
HOM M #4 Lymph node [MA:0000139] 0 0
HOM F #2 Tooth [MA:0000348] 0 0
HOM F #2 Large intestine [MA:0000333] 0 0
HOM F #1 Adrenal gland [MA:0000116] 0 0
HOM F #2 Pituitary gland [MA:0000176] 0 0
HOM F #2 Pancreas [MA:0000120] 0 0
HOM F #1 Bone marrow [MA:0000134] 0 0
HOM M #4 White adipose tissue [MA:0000058] 0 0
HOM M #3 Tibia [MA:0001361] 0 0

Associated histopathology images

Btnl4
homozygote
Stomach - MA term MA:0000353
Btnl4em1(IMPC)Tcp
experimental

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