Histopathology data for Btc

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #4 Large intestine [MA:0000333]
HOM M #2 Urinary bladder [MA:0000380]
HOM M #2 Seminal vesicle [MA:0000410]
HOM M #2 Adrenal gland [MA:0000116]
HOM F #1 Large intestine [MA:0000333]
HOM M #2 Kidney [MA:0000368]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Eye [MA:0000261]
HOM F #1 Stomach [MA:0000353]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #2 Epididymis [MA:0000397]
HOM F #1 Sternum [MA:0001331]
HOM F #4 Sternum [MA:0001331]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #3 Lymph node [MA:0000139]
HOM M #3 Thyroid
HOM M #2 Sternum [MA:0001331]
HOM M #2 Spleen [MA:0000141]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #1 Spleen [MA:0000141]
HOM M #3 Gall bladder [MA:0000356]
HOM F #4 Urinary bladder [MA:0000380]
HOM F #4 Spleen [MA:0000141]
HOM F #4 Heart [MA:0000072]
HOM F #4 Brain [MA:0000168]
HOM M #2 Femur [MA:0001359]
HOM M #2 Spinal cord [MA:0000216]
HOM F #1 Brain [MA:0000168]
HOM F #1 Heart [MA:0000072]
HOM F #1 Lung [MA:0000415]
HOM M #2 Ear [MA:0000236]
HOM F #4 Kidney [MA:0000368]
HOM F #1 Kidney [MA:0000368]
HOM F #4 Lung [MA:0000415]
HOM F #4 Adrenal gland [MA:0000116]
HOM M #2 Large intestine [MA:0000333]
HOM M #3 Tongue [MA:0000347]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #4 Stomach [MA:0000353]
HOM F #4 Tongue [MA:0000347]
HOM F #1 Tongue [MA:0000347]
HOM M #3 Heart [MA:0000072]
HOM M #3 Stomach [MA:0000353]
HOM F #4 Sciatic nerve [MA:0001172]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #1 Eye [MA:0000261]
HOM M #2 Skeletal muscle [MA:0003148]
HOM M #2 Skin [MA:0000151]
HOM F #1 Trachea [MA:0000441]
HOM F #1 Spinal cord [MA:0000216]
HOM M #3 Lung [MA:0000415]
HOM M #3 Spleen [MA:0000141]
HOM F #4 Esophagus [MA:0000352]
HOM M #2 Liver [MA:0000358]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM M #2 Heart [MA:0000072]
HOM M #2 Thymus [MA:0000142]
HOM F #1 Mammary gland [MA:0000145]
HOM M #3 Epididymis [MA:0000397]
HOM M #3 Skin [MA:0000151]
HOM F #1 Skin [MA:0000151]
HOM F #1 Thymus [MA:0000142]
HOM M #3 Knee joint [MA:0000471]
HOM F #4 Ovary [MA:0000384]
HOM M #3 Thymus [MA:0000142]
HOM F #4 Uterus [MA:0000389]
HOM F #4 Bone [MA:0001459]
HOM M #3 Tooth [MA:0000348]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM M #3 Sternum [MA:0001331]
HOM F #1 Thyroid
HOM F #1 Gall bladder [MA:0000356]
HOM F #4 Bone marrow [MA:0000134]
HOM M #2 Nasal cavity [MA:0000284]
HOM F #1 Femur [MA:0001359]
HOM F #1 Pancreas [MA:0000120]
HOM M #3 Femur [MA:0001359]
HOM M #3 Pancreas [MA:0000120]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #2 Stomach [MA:0000353]
HOM M #2 Lung [MA:0000415]
HOM M #2 Trachea [MA:0000441]
HOM M #3 Spinal cord [MA:0000216]
HOM M #2 Tooth [MA:0000348]
HOM M #2 Knee joint [MA:0000471]
HOM F #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #2 Salivary gland [MA:0000346]
HOM F #4 Knee joint [MA:0000471]
HOM M #2 Testis [MA:0000411]
HOM M #2 Bone [MA:0001459]
HOM F #4 Tooth [MA:0000348]
HOM F #1 Tooth [MA:0000348]
HOM F #1 Tibia [MA:0001361]
HOM M #2 Pancreas [MA:0000120]
HOM M #3 Adrenal gland [MA:0000116]
HOM F #1 Small intestine [MA:0000337]
HOM F #1 Salivary gland [MA:0000346]
HOM F #4 Salivary gland [MA:0000346]
HOM F #1 Knee joint [MA:0000471]
HOM F #4 Small intestine [MA:0000337]
HOM M #2 Sciatic nerve [MA:0001172]
HOM F #4 Tibia [MA:0001361]
HOM M #2 Eye [MA:0000261]
HOM F #4 Liver [MA:0000358]
HOM F #1 Liver [MA:0000358]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM M #2 Thyroid
HOM M #3 Liver [MA:0000358]
HOM F #4 Lymph node [MA:0000139]
HOM M #3 Kidney [MA:0000368]
HOM M #2 Gall bladder [MA:0000356]
HOM M #3 Tibia [MA:0001361]
HOM F #1 Lymph node [MA:0000139]
HOM F #4 Nasal cavity [MA:0000284]
HOM F #1 Sciatic nerve [MA:0001172]
HOM M #2 Esophagus [MA:0000352]
HOM M #2 Small intestine [MA:0000337]
HOM F #4 Eye [MA:0000261]
HOM F #4 Spinal cord [MA:0000216]
HOM M #3 Testis [MA:0000411]
HOM M #2 Bone marrow [MA:0000134]
HOM F #4 Trachea [MA:0000441]
HOM M #3 Prostate gland [MA:0000404]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM M #3 Large intestine [MA:0000333]
HOM M #2 Tibia [MA:0001361]
HOM M #3 Ear [MA:0000236]
HOM M #3 Brain [MA:0000168]
HOM F #1 Ovary [MA:0000384]
HOM M #3 Bone [MA:0001459]
HOM M #3 Small intestine [MA:0000337]
HOM M #3 Salivary gland [MA:0000346]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #1 Uterus [MA:0000389]
HOM M #2 Lymph node [MA:0000139]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM F #1 Ear [MA:0000236]
HOM F #4 Thyroid
HOM F #4 Thymus [MA:0000142]
HOM M #2 Prostate gland [MA:0000404]
HOM F #4 Mammary gland [MA:0000145]
HOM F #4 Gall bladder [MA:0000356]
HOM F #1 Bone [MA:0001459]
HOM F #1 Esophagus [MA:0000352]
HOM M #2 Tongue [MA:0000347]
HOM F #1 Bone marrow [MA:0000134]
HOM F #4 Femur [MA:0001359]
HOM M #3 Bone marrow [MA:0000134]
HOM F #4 Pancreas [MA:0000120]
HOM M #2 Brain [MA:0000168]
HOM F #4 Skin [MA:0000151]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM F #4 Skeletal muscle [MA:0003148]
HOM M #3 Esophagus [MA:0000352]

Associated histopathology images

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