Histopathology data for Bcar3

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #1 Stomach [MA:0000353]
HOM M #3 Stomach [MA:0000353]
HOM F #2 Tooth [MA:0000348]
HOM M #1 Large intestine [MA:0000333]
HOM M #3 Large intestine [MA:0000333]
HOM F #4 Tooth [MA:0000348]
HOM F #2 Knee joint [MA:0000471]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM F #2 Salivary gland [MA:0000346]
HOM M #1 Sternum [MA:0001331]
HOM M #1 Tongue [MA:0000347]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Sternum [MA:0001331]
HOM F #2 Bone [MA:0001459]
HOM M #1 Lung [MA:0000415]
HOM M #3 Lung [MA:0000415]
HOM F #4 Bone [MA:0001459]
HOM F #2 Pancreas [MA:0000120]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #3 Skin [MA:0000151]
HOM F #2 Gall bladder [MA:0000356]
HOM M #3 Epididymis [MA:0000397]
HOM M #1 Kidney [MA:0000368]
HOM M #1 Ear [MA:0000236]
HOM M #3 Brain [MA:0000168]
HOM F #2 Eye [MA:0000261] 3 1 Eyes, bilateral: Severe cataract with lens capsule rupture Eyes: Severe, multifocal retinal dysplasia and rosettes
HOM M #1 Heart [MA:0000072]
HOM M #3 Esophagus [MA:0000352]
HOM F #4 Lymph node [MA:0000139]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #4 Knee joint [MA:0000471]
HOM F #4 Trachea [MA:0000441]
HOM M #3 Prostate gland [MA:0000404]
HOM F #4 Salivary gland [MA:0000346]
HOM F #2 Thyroid
HOM M #1 Spleen [MA:0000141]
HOM F #4 Liver [MA:0000358]
HOM M #3 Trachea [MA:0000441]
HOM F #4 Uterus [MA:0000389]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #2 Skin [MA:0000151]
HOM F #2 Heart [MA:0000072]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM M #1 Bone marrow [MA:0000134]
HOM F #4 Bone marrow [MA:0000134]
HOM M #3 Bone marrow [MA:0000134]
HOM F #2 Liver [MA:0000358]
HOM M #1 Sciatic nerve [MA:0001172]
HOM F #2 Mammary gland [MA:0000145]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM F #2 Thymus [MA:0000142]
HOM F #4 Esophagus [MA:0000352]
HOM M #1 Lymph node [MA:0000139] 1 0 Mesenteric lymph node: Mild, paracortical lymphoid hyperplasia
HOM F #4 Heart [MA:0000072]
HOM M #1 Small intestine [MA:0000337]
HOM F #4 Large intestine [MA:0000333]
HOM F #4 Sciatic nerve [MA:0001172]
HOM M #1 Salivary gland [MA:0000346]
HOM M #1 Bone [MA:0001459]
HOM M #1 Urinary bladder [MA:0000380]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #1 Adrenal gland [MA:0000116]
HOM M #3 Liver [MA:0000358]
HOM M #3 Heart [MA:0000072]
HOM M #1 Brain [MA:0000168]
HOM M #1 Esophagus [MA:0000352]
HOM M #3 Ear [MA:0000236]
HOM M #1 Testis [MA:0000411]
HOM M #1 Prostate gland [MA:0000404]
HOM F #4 Ear [MA:0000236]
HOM F #2 Trachea [MA:0000441]
HOM F #2 Lung [MA:0000415]
HOM F #2 Nasal cavity [MA:0000284]
HOM F #2 Stomach [MA:0000353]
HOM F #2 Kidney [MA:0000368]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #3 Pancreas [MA:0000120]
HOM F #4 Ovary [MA:0000384]
HOM M #1 Pancreas [MA:0000120]
HOM F #2 Sternum [MA:0001331]
HOM F #2 Ovary [MA:0000384]
HOM F #4 Femur [MA:0001359]
HOM F #4 Kidney [MA:0000368]
HOM F #2 Spleen [MA:0000141] 1 0 Spleen: Mild red pulp hypercellularity (extramedullary hematopoiesis)
HOM F #4 Spinal cord [MA:0000216]
HOM F #4 Sternum [MA:0001331]
HOM M #3 Knee joint [MA:0000471]
HOM M #3 Bone [MA:0001459]
HOM M #3 Small intestine [MA:0000337]
HOM M #3 Salivary gland [MA:0000346]
HOM M #3 Thymus [MA:0000142]
HOM M #1 Liver [MA:0000358]
HOM F #4 Stomach [MA:0000353]
HOM F #2 Spinal cord [MA:0000216]
HOM M #1 Tibia [MA:0001361]
HOM F #2 Femur [MA:0001359]
HOM F #2 Ear [MA:0000236]
HOM F #2 Large intestine [MA:0000333]
HOM F #4 Lung [MA:0000415]
HOM F #4 Adrenal gland [MA:0000116]
HOM F #4 Urinary bladder [MA:0000380]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM F #4 Small intestine [MA:0000337]
HOM M #3 Testis [MA:0000411]
HOM M #3 Tooth [MA:0000348]
HOM F #4 Brain [MA:0000168]
HOM M #1 Spinal cord [MA:0000216]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #4 Mammary gland [MA:0000145]
HOM F #2 Esophagus [MA:0000352]
HOM F #4 Thymus [MA:0000142]
HOM F #4 Tongue [MA:0000347]
HOM M #1 Trachea [MA:0000441]
HOM M #1 Eye [MA:0000261]
HOM M #1 Femur [MA:0001359]
HOM M #3 Femur [MA:0001359]
HOM F #4 Skin [MA:0000151]
HOM F #2 Small intestine [MA:0000337]
HOM M #3 Gall bladder [MA:0000356]
HOM M #1 Gall bladder [MA:0000356]
HOM M #3 Thyroid
HOM M #3 Spinal cord [MA:0000216]
HOM F #2 Bone marrow [MA:0000134]
HOM F #4 Skeletal muscle [MA:0003148]
HOM F #4 Pancreas [MA:0000120]
HOM M #1 Thyroid
HOM F #2 Tibia [MA:0001361]
HOM M #3 Eye [MA:0000261] 1 0 Eye: Mild, retinal dysplasia (only partial section of one eye in section for evaluation; no lens in section)
HOM M #1 Nasal cavity [MA:0000284]
HOM M #3 Lymph node [MA:0000139]
HOM F #4 Tibia [MA:0001361]
HOM M #1 Skeletal muscle [MA:0003148]
HOM F #2 Uterus [MA:0000389]
HOM M #3 Skeletal muscle [MA:0003148]
HOM M #1 Epididymis [MA:0000397]
HOM M #1 Skin [MA:0000151]
HOM F #4 Trigeminal V ganglion [MA:0001080]
HOM M #1 Knee joint [MA:0000471]
HOM M #1 Thymus [MA:0000142]
HOM F #4 Eye [MA:0000261] 3 1 Eyes, bilateral: Severe cataract with lens capsule wrinkling and fiber leakage Eye, unilateral: Multifocal retinal dysplasia
HOM M #3 Tibia [MA:0001361]
HOM M #3 Kidney [MA:0000368]
HOM F #2 Tongue [MA:0000347]
HOM F #4 Spleen [MA:0000141]
HOM M #3 Spleen [MA:0000141]
HOM F #2 Brain [MA:0000168]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #4 Gall bladder [MA:0000356]
HOM F #2 Lymph node [MA:0000139]
HOM F #4 Thyroid
HOM M #1 Tooth [MA:0000348]
HOM F #2 Adrenal gland [MA:0000116]

Associated histopathology images

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