IMPC
- Release: 11.0
- Published: 23-February-2020
Statistical Package
- PhenStat
- Version: 2.20.3
Genome Assembly
- Mus musculus
- Version: GRCm38
Highlights
Data release 11.0
- First release to include data from the late adult pipeline.
- Nearly 60 million datapoints and 590 thousand images.
- Inclusion of data from the Czech Centre for Phenogenomics group.
- Change the method of associating background strain to a colony, required for alignment for some colonies to corresponding control group.
Data Reports
Total Number of Lines and Specimens in DR 11.0
Phenotyping Center | Mutant Lines | Baseline Mice | Mutant Mice |
---|---|---|---|
JAX | 1,231 | 9,257 | 34,736 |
TCP | 604 | 7,506 | 25,501 |
HMGU | 346 | 3,605 | 6,404 |
CCP-IMG | 91 | 1,293 | 1,524 |
KMPC | 49 | 1,295 | 1,758 |
MARC | 232 | 1,877 | 3,776 |
MRC Harwell | 679 | 6,780 | 16,321 |
RBRC | 99 | 2,097 | 1,939 |
ICS | 237 | 2,518 | 3,828 |
WTSI | 1,432 | 4,981 | 17,542 |
BCM | 654 | 5,549 | 19,282 |
UC Davis | 1,246 | 5,003 | 25,202 |
Experimental Data and Quality Checks
Data Type | QC passed | QC failed | issues |
---|---|---|---|
categorical | 17,290,216 | 3,167 * | 69,876 * |
unidimensional | 12,660,671 | 56,530 * | 342,796 * |
time series | 15,043,961 | 2,660 * | 17 * |
text | 239,514 | 10,921 * | 122,064 * |
image record | 519,670 | 0 | 0 |
* Excluded from statistical analysis.
Distribution of Phenotype Annotations
Production Status
Overall
By Center
More charts and status information are available from iMits.
Previous Releases
- Release 10.1 notes
- Release 10.0 notes
- Release 9.2 notes
- Release 9.1 notes
- Release 8.0 notes
- Release 7.0 notes
- Release 6.1 notes
- Release 6.0 notes
- Release 5.0 notes
- Release 4.3 notes
- Release 4.2 notes
- Release 4.0 notes
- Release 3.4 notes
- Release 3.3 notes
- Release 3.2 notes
- Release 3.1 notes
- Release 3.0 notes
- Release 2.0 notes
- Release 1.1 notes
- Release 1.0 notes