Histopathology data for Lonrf3

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #1 Uterus [MA:0000389] normal [MPATH:458] 0 0
HEM M #2 Kidney [MA:0000368] normal [MPATH:458] 0 0
HOM F #3 Ovary [MA:0000384] normal [MPATH:458] 0 0
HEM M #4 Spleen [MA:0000141] normal [MPATH:458] 0 0
HEM M #2 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HEM M #4 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HEM M #4 Skin [MA:0000151] normal [MPATH:458] 0 0
HOM F #1 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HOM F #3 Sternum [MA:0001331] normal [MPATH:458] 0 0
HEM M #2 Adrenal gland [MA:0000116] developmental and structural abnormality [MPATH:55] Not applicable 0 localized accessory adrenal cortical tissue
HOM F #3 Kidney [MA:0000368] normal [MPATH:458] 0 0
HEM M #4 Femur [MA:0001359] normal [MPATH:458] 0 0
HEM M #4 Trachea [MA:0000441] normal [MPATH:458] 0 0
HEM M #2 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0
HEM M #4 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HEM M #4 Thyroid normal [MPATH:458] 0 0
HOM F #3 Femur [MA:0001359] normal [MPATH:458] 0 0
HEM M #2 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HEM M #4 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HEM M #2 Stomach [MA:0000353] normal [MPATH:458] 0 0
HEM M #4 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HOM F #3 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HOM F #3 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HEM M #4 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HEM M #2 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HEM M #4 Sternum [MA:0001331] normal [MPATH:458] 0 0
HEM M #4 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HEM M #4 Testes normal [MPATH:458] 0 0
HOM F #3 Trachea [MA:0000441] normal [MPATH:458] 0 0
HEM M #4 Prostate normal [MPATH:458] 0 0
HOM F #3 Stomach [MA:0000353] normal [MPATH:458] 0 0
HOM F #1 Liver [MA:0000358] normal [MPATH:458] 0 0
HOM F #3 Thyroid normal [MPATH:458] 0 0
HOM F #3 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HOM F #3 Mammary gland [MA:0000145] normal [MPATH:458] 0 0
HEM M #2 Femur [MA:0001359] normal [MPATH:458] 0 0
HOM F #3 Thymus [MA:0000142] normal [MPATH:458] 0 0
HOM F #3 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HEM M #4 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HEM M #4 Brain [MA:0000168] process of degenerative change [MPATH:14] 3 0 distributed Dilation of the brain ventricles
HEM M #2 Spleen [MA:0000141] normal [MPATH:458] 0 0
HOM F #1 Eye with optic nerve normal [MPATH:458] 0 0
HOM F #1 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HEM M #4 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HEM M #2 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HOM F #1 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HEM M #4 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0
HEM M #4 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HEM M #2 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HEM M #2 Thyroid normal [MPATH:458] 0 0
HEM M #4 Tibia [MA:0001361] normal [MPATH:458] 0 0
HEM M #2 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HOM F #3 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HEM M #4 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HOM F #3 Brain [MA:0000168] normal [MPATH:458] 0 0
HOM F #3 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HEM M #4 Lung [MA:0000415] normal [MPATH:458] 0 0
HEM M #4 Stomach [MA:0000353] normal [MPATH:458] 0 0
HEM M #4 Thymus [MA:0000142] normal [MPATH:458] 0 0
HEM M #4 Heart [MA:0000072] normal [MPATH:458] 0 0
HOM F #3 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HEM M #4 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HOM F #3 Spleen [MA:0000141] normal [MPATH:458] 0 0
HOM F #1 Skin [MA:0000151] normal [MPATH:458] 0 0
HOM F #3 Tibia [MA:0001361] normal [MPATH:458] 0 0
HEM M #4 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HOM F #1 Kidney [MA:0000368] normal [MPATH:458] 0 0
HOM F #3 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HOM F #1 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HEM M #2 Testes normal [MPATH:458] 0 0
HOM F #1 Femur [MA:0001359] normal [MPATH:458] 0 0
HEM M #2 Liver [MA:0000358] normal [MPATH:458] 0 0
HOM F #3 Heart [MA:0000072] normal [MPATH:458] 0 0
HOM F #3 Lung [MA:0000415] normal [MPATH:458] 0 0
HEM M #2 Brain [MA:0000168] normal [MPATH:458] 0 0
HOM F #1 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HOM F #1 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HEM M #2 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HOM F #1 Spleen [MA:0000141] normal [MPATH:458] 0 0
HEM M #2 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HEM M #2 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HEM M #2 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HEM M #2 Eye with optic nerve normal [MPATH:458] 0 0
HEM M #4 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HOM F #1 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HOM F #1 Trachea [MA:0000441] normal [MPATH:458] 0 0
HEM M #2 Tibia [MA:0001361] normal [MPATH:458] 0 0
HOM F #3 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HOM F #1 Thyroid normal [MPATH:458] 0 0
HOM F #1 Ovary [MA:0000384] normal [MPATH:458] 0 0
HOM F #3 Uterus [MA:0000389] normal [MPATH:458] 0 0
HEM M #2 Lung [MA:0000415] normal [MPATH:458] 0 0
HEM M #2 Heart [MA:0000072] normal [MPATH:458] 0 0
HOM F #3 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HEM M #2 Thymus [MA:0000142] developmental and structural abnormality [MPATH:55] 1 0 cyst MPATH:62 localized Epithelial cyst
HOM F #3 Liver [MA:0000358] normal [MPATH:458] 0 0
HOM F #1 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HOM F #1 Sternum [MA:0001331] process of degenerative change [MPATH:14] Not applicable 0 focally extensive chronic Sternal dislocation and reactive and reparative chondroid hyperplasia ('calus')
HOM F #1 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HEM M #2 Epididymis [MA:0000397] normal [MPATH:458] 0 0
HOM F #3 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HEM M #2 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HOM F #1 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HEM M #4 Kidney [MA:0000368] normal [MPATH:458] 0 0
HOM F #1 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HOM F #1 Brain [MA:0000168] normal [MPATH:458] 0 0
HEM M #4 Liver [MA:0000358] normal [MPATH:458] 0 0
HOM F #3 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HOM F #1 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HEM M #4 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HEM M #2 Skin [MA:0000151] normal [MPATH:458] 0 0
HOM F #1 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HOM F #1 Tibia [MA:0001361] normal [MPATH:458] 0 0
HOM F #3 Skin [MA:0000151] normal [MPATH:458] 0 0
HOM F #3 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HEM M #4 Eye with optic nerve normal [MPATH:458] 0 0
HOM F #3 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HOM F #1 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HEM M #2 Trachea [MA:0000441] normal [MPATH:458] 0 0
HOM F #1 Lung [MA:0000415] normal [MPATH:458] 0 0
HOM F #1 Stomach [MA:0000353] normal [MPATH:458] 0 0
HOM F #1 Thymus [MA:0000142] normal [MPATH:458] 0 0
HOM F #1 Mammary gland [MA:0000145] normal [MPATH:458] 0 0
HOM F #1 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HOM F #1 Heart [MA:0000072] fibrosis [MPATH:181] 1 0 chronic focally extensive Right ventricular epicardial fibrosis
HOM F #3 Eye with optic nerve normal [MPATH:458] 0 0
HEM M #2 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HEM M #2 Prostate normal [MPATH:458] 0 0
HOM F #3 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HEM M #4 Epididymis [MA:0000397] normal [MPATH:458] 0 0
HEM M #2 Sternum [MA:0001331] process of degenerative change [MPATH:14] Not applicable 0 chronic focally extensive Sternal dislocation and reactive and reparative chondroid hyperplasia ('calus')
HEM M #2 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HEM M #2 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HEM M #4 Bone marrow [MA:0000134] normal [MPATH:458] 0 0

Associated histopathology images

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