Histopathology data for Foxe3

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #2 Thymus [MA:0000142]
HOM F #2 Small intestine [MA:0000337]
HOM M #3 Eye [MA:0000261] 3 1 bilateral microphthalamia; aphakia; lens rupture with dysplasia; anterior synechia with iris dysplasia
HOM M #3 Bone marrow [MA:0000134]
HOM F #1 Gall bladder [MA:0000356]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #3 Lymph node [MA:0000139]
HOM F #1 Bone [MA:0001459]
HOM F #1 Thyroid
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #4 Tibia [MA:0001361]
HOM M #3 Skeletal muscle [MA:0003148]
HOM M #3 Trachea [MA:0000441]
HOM M #4 Thymus [MA:0000142]
HOM F #1 Lymph node [MA:0000139]
HOM M #4 Liver [MA:0000358]
HOM M #3 Gall bladder [MA:0000356]
HOM F #1 Eye [MA:0000261] 3 1 microphthalamia; aphakia; anterior synechia with iris dysplasia
HOM M #3 Thyroid
HOM M #3 Brain [MA:0000168]
HOM F #2 Liver [MA:0000358]
HOM F #2 Mammary gland [MA:0000145]
HOM F #2 Tibia [MA:0001361]
HOM F #1 Sciatic nerve [MA:0001172]
HOM M #4 Pancreas [MA:0000120]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Ear [MA:0000236]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #3 Lung [MA:0000415]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM M #3 Heart [MA:0000072]
HOM F #1 Brain [MA:0000168]
HOM F #2 Knee joint [MA:0000471]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #1 Tibia [MA:0001361]
HOM F #2 Tooth [MA:0000348]
HOM M #3 Testis [MA:0000411]
HOM F #1 Uterus [MA:0000389]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #3 Urinary bladder [MA:0000380]
HOM M #3 Salivary gland [MA:0000346]
HOM M #4 Bone [MA:0001459]
HOM M #4 Lymph node [MA:0000139]
HOM F #2 Spleen [MA:0000141]
HOM F #2 Sternum [MA:0001331]
HOM F #2 Femur [MA:0001359]
HOM F #2 Kidney [MA:0000368]
HOM F #1 Bone marrow [MA:0000134]
HOM M #3 Large intestine [MA:0000333]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM F #1 Tongue [MA:0000347]
HOM F #2 Spinal cord [MA:0000216]
HOM F #2 Eye [MA:0000261] 3 1 bilateral microphthalmia; aphakia; retinal dysplasia;
HOM M #4 Esophagus [MA:0000352]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #3 Prostate gland [MA:0000404]
HOM F #2 Pancreas [MA:0000120]
HOM F #1 Esophagus [MA:0000352]
HOM M #4 Seminal vesicle [MA:0000410]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #4 Testis [MA:0000411]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #1 Salivary gland [MA:0000346]
HOM M #4 Brain [MA:0000168]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM F #1 Small intestine [MA:0000337]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Bone [MA:0001459]
HOM M #4 Salivary gland [MA:0000346]
HOM F #2 Gall bladder [MA:0000356]
HOM M #3 Esophagus [MA:0000352]
HOM F #2 Thyroid
HOM M #4 Lung [MA:0000415]
HOM F #2 Skin [MA:0000151]
HOM M #4 Prostate gland [MA:0000404]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #2 Uterus [MA:0000389]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM F #2 Tongue [MA:0000347]
HOM M #4 Stomach [MA:0000353]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Skin [MA:0000151]
HOM M #3 Small intestine [MA:0000337]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Femur [MA:0001359]
HOM F #1 Kidney [MA:0000368]
HOM F #2 Heart [MA:0000072]
HOM F #1 Ovary [MA:0000384]
HOM M #4 Tongue [MA:0000347]
HOM M #4 Heart [MA:0000072]
HOM M #4 Sternum [MA:0001331]
HOM F #2 Esophagus [MA:0000352]
HOM F #1 Spleen [MA:0000141]
HOM M #4 Bone marrow [MA:0000134]
HOM F #2 Stomach [MA:0000353]
HOM F #2 Lymph node [MA:0000139]
HOM M #4 Kidney [MA:0000368]
HOM F #1 Large intestine [MA:0000333]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #4 Spleen [MA:0000141]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Lung [MA:0000415]
HOM F #2 Brain [MA:0000168]
HOM M #3 Tibia [MA:0001361]
HOM M #3 Kidney [MA:0000368]
HOM M #4 Ear [MA:0000236]
HOM F #2 Trachea [MA:0000441]
HOM M #4 Large intestine [MA:0000333]
HOM M #3 Liver [MA:0000358]
HOM M #4 Gall bladder [MA:0000356]
HOM M #3 Spleen [MA:0000141]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #2 Salivary gland [MA:0000346]
HOM M #4 Thyroid
HOM M #3 Sternum [MA:0001331]
HOM F #1 Heart [MA:0000072]
HOM F #2 Ovary [MA:0000384]
HOM F #1 Lung [MA:0000415]
HOM M #4 Trachea [MA:0000441]
HOM F #1 Liver [MA:0000358]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #3 Tooth [MA:0000348]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Mammary gland [MA:0000145]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #3 Knee joint [MA:0000471]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Pancreas [MA:0000120]
HOM M #3 Stomach [MA:0000353]
HOM F #1 Stomach [MA:0000353]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Epididymis [MA:0000397]
HOM M #4 Femur [MA:0001359]
HOM M #4 Eye [MA:0000261] 3 1 bilateral persistent hyaloid membranes and arteries; aphakia; lens rupture with dysplasia
HOM F #2 Bone [MA:0001459]
HOM F #1 Skin [MA:0000151]
HOM M #4 Tooth [MA:0000348]
HOM F #2 Large intestine [MA:0000333]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #1 Sternum [MA:0001331]
HOM M #3 Skin [MA:0000151]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #1 Trachea [MA:0000441]
HOM F #1 Knee joint [MA:0000471]
HOM F #1 Tooth [MA:0000348]
HOM M #3 Pancreas [MA:0000120]
HOM M #3 Epididymis [MA:0000397]
HOM M #3 Femur [MA:0001359]
HOM M #4 Knee joint [MA:0000471]
HOM M #3 Thymus [MA:0000142]
HOM M #3 Spinal cord [MA:0000216]

Associated histopathology images

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