Phenotype: decreased T cell number

Definition
fewer than normal T cell numbers
Synonyms
reduced T-lymphocyte number,  reduced T-cell count,  decreased T-cell number,  decreased T cell count,  reduced T cell number,  reduced T lymphocyte number,  decreased T-cell count,  reduced T-cell number
0%
of tested genes
0
significant genes
0
tested genes

IMPC Gene variants with decreased T cell number

Total number of significant genotype-phenotype associations: 196

Gene / Allele Zygosity Sex Life Stage Phenotype Parameter Phenotyping
Center
P Value
Arhgef1
Arhgef1tm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker gamma-delta T cell number Resting gd T cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Arhgef1
Arhgef1tm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker CD4-positive NK T cell number Resting CD4+ NKT cells - % of CD4+ NKT cells
Spleen Immunophenotyping
WTSI
3i
0.00
Arhgef1
Arhgef1tm1a(EUCOMM)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Arpc1b
Arpc1btm1a(EUCOMM)Wtsi
HOM Early adult decreased CD4-positive, alpha-beta T cell number CD4+ alpha beta T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Bach2
Bach2tm1a(EUCOMM)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Resting CD8+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Bach2
Bach2tm1a(EUCOMM)Wtsi
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Brd2
Brd2em1(IMPC)Wtsi
HET   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Cd28
Cd28tm1a(EUCOMM)Hmgu
HOM Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
MRC Harwell
EuroPhenome
0.00
Clpp
Clpptm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker CD4-positive NK T cell number Effector CD4+ NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Clpp
Clpptm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker CD4-negative NK T cell number Effector CD4- NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Clpp
Clpptm1a(EUCOMM)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Effector CD8+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Clpp
Clpptm1a(EUCOMM)Wtsi
HOM   Early adult decreased CD4-positive NK T cell number Total CD4+ NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Clpp
Clpptm1a(EUCOMM)Wtsi
HOM   Early adult decreased NK T cell number Total NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Clpp
Clpptm1a(EUCOMM)Wtsi
HOM Early adult decreased gamma-delta T cell number Gamma delta T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Resting CD8+ T cells - % of CD8+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker gamma-delta T cell number Resting gd T cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased NK T cell number Total NKT cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD4+
Spleen Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker CD4-positive NK T cell number Resting CD4+ NKT cells - % of CD4+ NKT cells
Spleen Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased memory-marker CD4-negative NK T cell number Resting CD4- NKT cells - % of CD4- NKT cells
Spleen Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased CD4-positive NK T cell number Total CD4+ NKT cells - % of NKT cells
Spleen Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased alpha-beta T cell number Alpha beta T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Cog6
Cog6tm1a(EUCOMM)Wtsi
HOM   Early adult decreased T cell number Total T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Cxcr2
Cxcr2tm1a(EUCOMM)Wtsi
HOM   Early adult decreased T cell number T cells - % of CD45+
Bone marrow immunophenotyping
WTSI
3i
0.00
Cxcr2
Cxcr2tm1a(EUCOMM)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
D6Wsu163e
D6Wsu163etm1b(EUCOMM)Wtsi
HOM   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Dph6
Dph6tm1a(KOMP)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Resting CD8+ T cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Dph6
Dph6tm1a(KOMP)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of ab T cells
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Dph6
Dph6tm1a(KOMP)Wtsi
HOM   Early adult decreased NK T cell number Total NKT cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Dph6
Dph6tm1a(KOMP)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD4+
Spleen Immunophenotyping
WTSI
3i
0.00
Duoxa2
Duoxa2tm1b(KOMP)Wtsi
HOM   Early adult decreased memory-marker gamma-delta T cell number Effector gd T cells - % of gd T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Duoxa2
Duoxa2tm1b(KOMP)Wtsi
HOM   Early adult decreased memory CD4-positive, CD25-positive, alpha-beta regulatory T cell number Resting Treg cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Duoxa2
Duoxa2tm1b(KOMP)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Gda
Gdatm1a(KOMP)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Gimap6
Gimap6tm1a(KOMP)Wtsi
HOM   Early adult decreased memory-marker CD4-negative NK T cell number Effector CD4- NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gimap6
Gimap6tm1a(KOMP)Wtsi
HOM   Early adult decreased CD4-negative NK T cell number Total CD4- NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased KLRG1+ CD8 alpha-beta T cell number KLRG1+ CD8+ T cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of ab T cells
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased memory-marker CD4-positive NK T cell number Effector CD4+ NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased memory CD4-positive, CD25-positive, alpha-beta regulatory T cell number Effector Treg cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased memory-marker CD4-negative NK T cell number Resting CD4- NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Resting CD8+ T cells - % of CD8+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased CD4-positive NK T cell number Total CD4+ NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number Total Treg cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM   Early adult decreased alpha-beta T cell number Total ab T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Gmds
Gmdstm1a(KOMP)Wtsi
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Hbs1l
Hbs1ltm1a(KOMP)Wtsi
HOM   Early adult decreased memory-marker CD4-negative NK T cell number Resting CD4- NKT cells - % of CD4- NKT cells
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Hbs1l
Hbs1ltm1a(KOMP)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Resting CD8+ T cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Hbs1l
Hbs1ltm1a(KOMP)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD4+
Spleen Immunophenotyping
WTSI
3i
0.00
Il27
Il27tm1b(EUCOMM)Wtsi
HOM Early adult decreased CD4-positive, alpha-beta memory T cell number CD4+ CD44+ CD62L- alpha beta effector T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Irf5
Irf5tm1e(EUCOMM)Wtsi
HOM Early adult decreased CD4-positive, alpha-beta memory T cell number CD4+ CD44+ CD62L- alpha beta effector T cell number
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Mkrn2
Mkrn2tm1b(KOMP)Wtsi
HOM   Early adult decreased dendritic epidermal T cell number DETC coverage
Ear epidermis immunophenotyping
WTSI
3i
0.00
Ncf2
Ncf2tm1a(EUCOMM)Wtsi
HOM Early adult decreased alpha-beta T cell number Alpha beta T cell number
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Ncf2
Ncf2tm1a(EUCOMM)Wtsi
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell number
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Ncf2
Ncf2tm1a(EUCOMM)Wtsi
HOM Early adult decreased NK T cell number NKT cell number
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Ncf2
Ncf2tm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number Total T cell number
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Nrbp1
Nrbp1tm3b(EUCOMM)Wtsi
HET   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of ab T cells
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Pclaf
Pclaftm1a(EUCOMM)Wtsi
HOM   Early adult decreased T cell number T cells - % of CD45+
Bone marrow immunophenotyping
WTSI
3i
0.00
Pclaf
Pclaftm1a(EUCOMM)Wtsi
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Pepd
Pepdtm1a(KOMP)Wtsi
HOM   Early adult decreased Ly6C-positive NK T cell number Ly6C+ NKT cells - % of lymphocytes
Spleen Immunophenotyping
WTSI
3i
0.00
Rwdd1
Rwdd1tm1b(KOMP)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Rwdd1
Rwdd1tm1b(KOMP)Wtsi
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Sgsm1
Sgsm1tm1b(EUCOMM)Wtsi
HOM   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD4+
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased CD5-positive gamma-delta T cell number CD5+ gd T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased memory-marker CD4-positive NK T cell number Effector CD4+ NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased memory-marker CD4-negative NK T cell number Resting CD4- NKT cells - % of CD4- NKT cells
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased CD4-positive NK T cell number Total CD4+ NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased NK T cell number Total NKT cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased gamma-delta T cell number Total gd T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM   Early adult decreased alpha-beta T cell number Alpha beta T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell number
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Sik3
Sik3tm1a(EUCOMM)Hmgu
HOM Early adult decreased T cell number Total T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Tmem126a
Tmem126atm1a(EUCOMM)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Tmem126a
Tmem126atm1a(EUCOMM)Wtsi
HOM   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Tmem126a
Tmem126atm1a(EUCOMM)Wtsi
HOM   Early adult decreased alpha-beta T cell number Total ab T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Tmem127
Tmem127tm1(KOMP)Wtsi
HOM   Early adult decreased effector memory CD8-positive, alpha-beta T cell number Resting CD8+ T cells - % of CD45+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Tmem127
Tmem127tm1(KOMP)Wtsi
HOM   Early adult decreased CD4-positive, alpha-beta T cell number Total CD4+ T cells - % of ab T cells
Spleen Immunophenotyping
WTSI
3i
0.00
Traf2
Traf2tm1a(EUCOMM)Wtsi
HET   Early adult decreased CD8-positive, alpha-beta T cell number Total CD8+ T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Traf2
Traf2tm1a(EUCOMM)Wtsi
HET   Early adult decreased alpha-beta T cell number Total ab T cells - % of CD45+
Spleen Immunophenotyping
WTSI
3i
0.00
Trappc9
Trappc9tm1a(EUCOMM)Wtsi
HOM Early adult decreased gamma-delta T cell number Gamma delta T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Trim56
Trim56tm1a(EUCOMM)Wtsi
HOM Early adult decreased regulatory T cell number CD4+ CD25+ alpha beta regulatory T cell percentage
Whole blood peripheral blood leukocyte immunophenotyping
WTSI
3i
0.00
Vps13a
Vps13atm1b(EUCOMM)Wtsi
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of CD4+
Mesenteric Lymph Node Immunophenotyping
WTSI
3i
0.00
Card11
Card11em1(IMPC)Ccpcz
HOM Early adult decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number Treg cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
3.18×10-36
Psmb11
Psmb11em1(IMPC)Ccpcz
HOM Early adult decreased CD8-positive, alpha-beta T cell number CD8+ T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
8.65×10-21
Cd38
Cd38em1(IMPC)Ccpcz
HOM Early adult decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number Treg cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
4.30×10-20
Elk4
Elk4tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD4-positive, alpha-beta T cell number T cell CD4+ percentage
FACs Analysis
HMGU
EuroPhenome
2.71×10-16
Elk4
Elk4tm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
HMGU
EuroPhenome
1.14×10-13
Tmem150b
Tmem150bem1(IMPC)Ccpcz
HOM Early adult decreased memory-marker CD4-positive NK T cell number CD4 CD44+CD62L+ NKT cells
Immunophenotyping
CCP-IMG
IMPC
1.75×10-12
Nub1
Nub1tm1b(EUCOMM)Hmgu
HOM Early adult decreased Ly6C-positive NK T cell number NKT Subsets (Q1)
Immunophenotyping
CCP-IMG
IMPC
2.09×10-11
Nub1
Nub1tm1b(EUCOMM)Hmgu
HOM Early adult decreased NK T cell number NKT Cells (panel B)
Immunophenotyping
CCP-IMG
IMPC
1.33×10-10
Cd38
Cd38em1(IMPC)Ccpcz
HOM Early adult decreased CD4-positive NK T cell number CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
1.57×10-10
Cd38
Cd38em1(IMPC)Ccpcz
HOM Early adult decreased memory-marker CD4-positive NK T cell number Effector CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
1.87×10-10
Elk4
Elk4tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
HMGU
EuroPhenome
6.47×10-10
Cd38
Cd38em1(IMPC)Ccpcz
HOM Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
1.00×10-09
Card11
Card11em1(IMPC)Ccpcz
HOM Early adult decreased effector memory CD8-positive, alpha-beta T cell number Naïve CD8+ T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
1.12×10-09
Ubd
Ubdtm1b(EUCOMM)Wtsi
HOM Early adult decreased memory-marker CD4-positive NK T cell number CD4 CD44+CD62L+ NKT cells
Immunophenotyping
CCP-IMG
IMPC
1.59×10-09
Usp12
Usp12tm1a(EUCOMM)Hmgu
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
HMGU
EuroPhenome
1.75×10-09
Bach2
Bach2tm1b(EUCOMM)Wtsi
HOM Early adult decreased CD4-negative NK T cell number DN NKT cells
Immunophenotyping
HMGU
IMPC
2.44×10-09
Nr1d2
Nr1d2tm1Dgen
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
ICS
EuroPhenome
4.92×10-09
Apbb1ip
Apbb1ipem1(IMPC)Ccpcz
HOM Early adult decreased CD8-positive, alpha-beta T cell number CD8+ T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
5.40×10-08
Nr1d2
Nr1d2tm1Dgen
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
ICS
EuroPhenome
8.21×10-08
Acp2
Acp2tm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
9.34×10-08
Acp2
Acp2tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
1.26×10-07
Cd27
Cd27em1(IMPC)Ccpcz
HOM Early adult decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number Treg cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
2.16×10-07
Arb2a
Arb2aem2(IMPC)Ccpcz
HOM Early adult decreased Ly6C-positive NK T cell number NKT Subsets (Q3)
Immunophenotyping
CCP-IMG
IMPC
3.09×10-07
Parvb
Parvbtm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
MRC Harwell
EuroPhenome
3.12×10-07
Fam234b
Fam234btm1a(EUCOMM)Wtsi
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
HMGU
EuroPhenome
3.98×10-07
Bach2
Bach2tm1b(EUCOMM)Wtsi
HOM Early adult decreased NK T cell number NKT cells (panel A)
Immunophenotyping
HMGU
IMPC
5.91×10-07
Cpm
Cpmem1(IMPC)Ccpcz
HOM Early adult decreased CD8-positive, alpha-beta T cell number CD8+ T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
8.07×10-07
Nub1
Nub1tm1b(EUCOMM)Hmgu
HOM Early adult decreased CD8-positive, alpha-beta T cell number CD8 T cells
Immunophenotyping
CCP-IMG
IMPC
1.08×10-06
Abcg8
Abcg8tm1b(KOMP)Wtsi
HOM   Early adult decreased CD4-positive, alpha-beta T cell number CD4 T cells
Immunophenotyping
CCP-IMG
IMPC
1.76×10-06
Krtap8-1
Krtap8-1em1(IMPC)Ccpcz
HOM   Early adult decreased CD4-positive, alpha-beta T cell number CD4 T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
2.98×10-06
Gper1
Gper1tm1Dgen
HOM   Early adult decreased CD4-positive, alpha-beta T cell number T cell CD4+ percentage
FACs Analysis
HMGU
EuroPhenome
3.45×10-06
Gper1
Gper1tm1Dgen
HOM   Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
HMGU
EuroPhenome
3.84×10-06
Tmprss6
Tmprss6tm1b(EUCOMM)Wtsi
HOM Early adult decreased CD8-positive, alpha-beta T cell number CD8 T cells
Immunophenotyping
ICS
IMPC
3.88×10-06
Abcg8
Abcg8tm1b(KOMP)Wtsi
HOM   Early adult decreased memory-marker CD4-negative NK T cell number DN CD44+CD62L- NKT cells
Immunophenotyping
CCP-IMG
IMPC
3.94×10-06
Krtap8-1
Krtap8-1em1(IMPC)Ccpcz
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
5.51×10-06
Abcg8
Abcg8tm1b(KOMP)Wtsi
HOM Early adult decreased CD4-negative NK T cell number DN NKT cells
Immunophenotyping
CCP-IMG
IMPC
6.14×10-06
Nub1
Nub1tm1b(EUCOMM)Hmgu
HOM Early adult decreased CD4-negative NK T cell number DN NKT cells
Immunophenotyping
CCP-IMG
IMPC
6.17×10-06
Nub1
Nub1tm1b(EUCOMM)Hmgu
HOM Early adult decreased CD4-positive, alpha-beta T cell number CD4 T cells
Immunophenotyping
CCP-IMG
IMPC
6.63×10-06
Asb7
Asb7em1(IMPC)Ccpcz
HOM Early adult decreased CD8-positive, alpha-beta T cell number CD8+ T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
7.21×10-06
Ube3c
Ube3ctm1b(EUCOMM)Hmgu
HOM Early adult decreased Ly6C-positive NK T cell number NKT Subsets (Q1)
Immunophenotyping
HMGU
IMPC
7.45×10-06
Aldh2
Aldh2tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
7.68×10-06
Abcg8
Abcg8tm1b(KOMP)Wtsi
HOM   Early adult decreased T cell number T Cells (panel B)
Immunophenotyping
CCP-IMG
IMPC
7.77×10-06
Nub1
Nub1tm1b(EUCOMM)Hmgu
HOM Early adult decreased memory-marker CD4-negative NK T cell number DN CD44+CD62L- NKT cells
Immunophenotyping
CCP-IMG
IMPC
1.22×10-05
Usp12
Usp12tm1a(EUCOMM)Hmgu
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
HMGU
EuroPhenome
1.43×10-05
Atad2b
Atad2btm1b(EUCOMM)Hmgu
HOM Early adult decreased NK T cell number NKT Cells (panel B)
Immunophenotyping
ICS
IMPC
1.44×10-05
Cd38
Cd38em1(IMPC)Ccpcz
HOM Early adult decreased CD4-positive, alpha-beta T cell number CD4 T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
1.45×10-05
Abcg8
Abcg8tm1b(KOMP)Wtsi
HOM   Early adult decreased CD8-positive, alpha-beta T cell number CD8 T cells
Immunophenotyping
CCP-IMG
IMPC
1.71×10-05
Acp2
Acp2tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD4-positive, alpha-beta T cell number T cell CD4+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
1.80×10-05
Bahd1
Bahd1tm2b(KOMP)Wtsi
HET Early adult decreased effector memory CD8-positive, alpha-beta T cell number CD8 CD44+CD62L+ T cells
Immunophenotyping
ICS
IMPC
1.91×10-05
Bach2
Bach2tm1b(EUCOMM)Wtsi
HOM Early adult decreased memory-marker CD4-negative NK T cell number DN CD44+CD62L- NKT cells
Immunophenotyping
HMGU
IMPC
2.16×10-05
Rnase10
Rnase10tm1a(EUCOMM)Hmgu
HOM   Early adult decreased CD4-positive, alpha-beta T cell number T cell CD4+ percentage
FACs Analysis
ICS
EuroPhenome
2.19×10-05
Gpr83
Gpr83em1(IMPC)Ccpcz
HOM Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
2.27×10-05
Serf1
Serf1tm1a(EUCOMM)Hmgu
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
2.30×10-05
Arhgef4
Arhgef4tm1a(KOMP)Wtsi
HOM Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
HMGU
EuroPhenome
2.32×10-05
Tnfrsf1b
Tnfrsf1btm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
ICS
EuroPhenome
2.88×10-05
Rnase10
Rnase10tm1a(EUCOMM)Hmgu
HOM   Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
ICS
EuroPhenome
3.07×10-05
Cd38
Cd38em1(IMPC)Ccpcz
HOM   Early adult decreased T-helper cell number CD4+ T helper cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
3.33×10-05
Amelx
Amelxem1(IMPC)Ccpcz
HEM Early adult decreased CD4-positive NK T cell number CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
3.43×10-05
Amelx
Amelxem1(IMPC)Ccpcz
HEM Early adult decreased memory-marker CD4-positive NK T cell number Effector CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
3.53×10-05
Rcc1l
Rcc1ltm1a(EUCOMM)Hmgu
HET Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
HMGU
EuroPhenome
3.72×10-05
Aldh2
Aldh2tm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
3.81×10-05
Amelx
Amelxem1(IMPC)Ccpcz
HEM Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
3.86×10-05
Prss50
Prss50tm1a(EUCOMM)Hmgu
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
3.89×10-05
Gper1
Gper1tm1Dgen
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
HMGU
EuroPhenome
4.19×10-05
Prpsap2
Prpsap2tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
ICS
EuroPhenome
4.23×10-05
Mfng
Mfngem1(IMPC)Ccpcz
HOM   Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
4.47×10-05
Rc3h2
Rc3h2tm1a(KOMP)Wtsi
HET Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
HMGU
EuroPhenome
5.00×10-05
Rnf169
Rnf169tm1a(EUCOMM)Hmgu
HOM Early adult decreased CD8-positive, alpha-beta T cell number T cell CD8+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
5.08×10-05
Aldh2
Aldh2tm1a(EUCOMM)Wtsi
HOM Early adult decreased CD4-positive, alpha-beta T cell number T cell CD4+ percentage
FACs Analysis
MRC Harwell
EuroPhenome
5.16×10-05
Gpr83
Gpr83em1(IMPC)Ccpcz
HOM Early adult decreased CD4-positive NK T cell number CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
5.99×10-05
Fam234b
Fam234btm1a(EUCOMM)Wtsi
HOM Early adult decreased T cell number T cell CD3+ percentage
FACs Analysis
HMGU
EuroPhenome
6.07×10-05
Pknox1
Pknox1Gt(EUCJ0079d10)Hmgu
HET Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
HMGU
EuroPhenome
6.13×10-05
Abcg8
Abcg8tm1b(KOMP)Wtsi
HOM   Early adult decreased NK T cell number NKT cells (panel A)
Immunophenotyping
CCP-IMG
IMPC
6.45×10-05
Dock10
Dock10tm1a(EUCOMM)Hmgu
HOM Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
HMGU
EuroPhenome
6.93×10-05
Gpr83
Gpr83em1(IMPC)Ccpcz
HOM Early adult decreased memory-marker CD4-positive NK T cell number Effector CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
8.28×10-05
Cimap1b
Cimap1bem1(IMPC)Ccpcz
HOM   Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
8.36×10-05
Xbp1
Xbp1tm1a(EUCOMM)Wtsi
HET Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
HMGU
EuroPhenome
8.55×10-05
Pank2
Pank2em1(IMPC)Ccpcz
HOM   Early adult decreased CD8-positive, alpha-beta T cell number CD8+ T cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
8.60×10-05
Babam1
Babam1em1(IMPC)Ccpcz
HOM Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
9.10×10-05
Ube3c
Ube3ctm1b(EUCOMM)Hmgu
HOM Early adult decreased CD4-negative NK T cell number DN NKT cells
Immunophenotyping
HMGU
IMPC
9.11×10-05
Prss57
Prss57em1(IMPC)Ccpcz
HOM   Early adult decreased NK T cell number NKT cells (panel A) - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
9.20×10-05
Babam1
Babam1em1(IMPC)Ccpcz
HOM   Early adult decreased CD4-positive NK T cell number CD4+ NKT cells - % of live leukocytes (Panel A)
Immunophenotyping
CCP-IMG
IMPC
9.48×10-05
Mmp11
Mmp11tm1a(EUCOMM)Hmgu
HET Early adult decreased T cell number CD25+ percentage of CD4+ T cells
FACs Analysis
HMGU
EuroPhenome
9.92×10-05
Pdia6
Pdia6tm1b(EUCOMM)Hmgu
HET Late adult decreased CD4-positive NK T cell number CD4 NKT cells
Immunophenotyping
HMGU
IMPC
0.000100

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 The way we measure

 Phenotype associations stats

7.45% of tested genes with null mutations on a B6N genetic background have a phenotype association to decreased T cell number (77/1033)

5.84% females (35/599) 5.02% males (32/637)

Select a parameter    



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