Histopathology data for Spred3

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HET F #8 Tooth [MA:0000348] 0 0
HET M #6 Tooth [MA:0000348] 0 0
HOM M #3 Salivary gland [MA:0000346] 0 0
HET F #1 Thymus [MA:0000142] 0 0
HOM F #5 Tibia [MA:0001361] 0 0
HOM M #4 Esophagus [MA:0000352] 0 0
HOM F #2 Tibia [MA:0001361] 0 0
HET M #7 Tibia [MA:0001361] 0 0
HET M #6 Spinal cord [MA:0000216] 0 0
HET F #8 Spinal cord [MA:0000216] 0 0
HOM F #5 Sciatic nerve [MA:0001172] 0 0
HET F #1 Knee joint [MA:0000471] 0 0
HET M #7 Sciatic nerve [MA:0001172] 0 0
HOM M #4 Brain [MA:0000168] 0 0
HOM F #2 Sciatic nerve [MA:0001172] 0 0
HET M #6 Pancreas [MA:0000120] 0 0
HET F #8 Pancreas [MA:0000120] 0 0
HET M #6 Kidney [MA:0000368] 0 0
HET F #8 Kidney [MA:0000368] 0 0
HOM M #3 Lymph node [MA:0000139] 0 0
HET F #1 Skeletal muscle [MA:0003148] 0 0
HET F #8 Small intestine [MA:0000337] 0 0
HET M #6 Lung [MA:0000415] 0 0
HOM M #3 Trachea [MA:0000441] 0 0
HOM M #3 Nasal cavity [MA:0000284] 0 0
HOM M #4 Lymph node [MA:0000139] 0 0
HET F #8 Skeletal muscle [MA:0003148] 0 0
HET M #6 Knee joint [MA:0000471] 0 0
HOM M #4 Lung [MA:0000415] 0 0
HOM M #4 Nasal cavity [MA:0000284] 0 0
HOM F #2 Skin [MA:0000151] 0 0
HET M #6 Ear [MA:0000236] 0 0
HOM M #4 Stomach [MA:0000353] 0 0
HET M #7 Skin [MA:0000151] 0 0
HET F #8 Gall bladder [MA:0000356] 0 0
HOM M #4 Trachea [MA:0000441] 0 0
HET F #8 Esophagus [MA:0000352] 0 0
HET F #1 Gall bladder [MA:0000356] 0 0
HOM F #5 Heart [MA:0000072] 0 0
HET M #7 Heart [MA:0000072] 0 0
HET F #1 Esophagus [MA:0000352] 0 0
HOM F #5 Skin [MA:0000151] 0 0
HOM M #4 Heart [MA:0000072] 0 0
HET F #1 Tibia [MA:0001361] 0 0
HOM M #4 Tongue [MA:0000347] 0 0
HOM F #2 Heart [MA:0000072] 0 0
HOM M #3 Thymus [MA:0000142] 0 0
HET M #7 Knee joint [MA:0000471] 0 0
HOM M #4 Epididymis [MA:0000397] 0 0
HET M #7 Gall bladder [MA:0000356] 0 0
HOM M #4 Kidney [MA:0000368] 0 0
HET M #7 Esophagus [MA:0000352] 0 0
HOM M #3 Tibia [MA:0001361] 0 0
HOM F #5 Thymus [MA:0000142] 0 0
HOM M #4 Spleen [MA:0000141] 0 0
HOM F #2 Skeletal muscle [MA:0003148] 0 0
HOM F #5 Liver [MA:0000358] 0 0
HOM F #2 Liver [MA:0000358] 0 0
HET F #1 Pancreas [MA:0000120] 0 0
HOM F #2 Thymus [MA:0000142] 0 0
HET M #7 Brain [MA:0000168] 0 0
HET F #1 Tooth [MA:0000348] 0 0
HET M #6 Small intestine [MA:0000337] 0 0
HET F #1 Sciatic nerve [MA:0001172] 0 0
HET M #6 Seminal vesicle [MA:0000410] 0 0
HET M #6 Testis [MA:0000411] 0 0
HOM M #3 Spinal cord [MA:0000216] 0 0
HOM F #2 Spleen [MA:0000141] 0 0
HET M #6 Optic II nerve [MA:0001097] 0 0
HET M #6 Skeletal muscle [MA:0003148] 0 0
HET F #8 Sciatic nerve [MA:0001172] 0 0
HOM F #5 Spleen [MA:0000141] 0 0
HOM M #4 Gall bladder [MA:0000356] 0 0
HET F #1 Brain [MA:0000168] 0 0
HET F #8 Knee joint [MA:0000471] 0 0
HET M #6 Urinary bladder [MA:0000380] 0 0
HET M #7 Nasal cavity [MA:0000284] 0 0
HET F #8 Ear [MA:0000236] 0 0
HET F #8 Lung [MA:0000415] 0 0
HOM F #5 Spinal cord [MA:0000216] 0 0
HET F #1 Ear [MA:0000236] 0 0
HOM F #2 Kidney [MA:0000368] 0 0
HOM F #5 Kidney [MA:0000368] 0 0
HOM F #5 Skeletal muscle [MA:0003148] 0 0
HOM M #3 Gall bladder [MA:0000356] 0 0
HET F #8 Lymph node [MA:0000139] 0 0
HOM M #3 Sternum [MA:0001331] 3 0 chronic localized Segmental sternum dislocation
HET F #8 Nasal cavity [MA:0000284] 0 0
HOM M #3 Femur [MA:0001359] 0 0
HOM M #4 Sternum [MA:0001331] 3 0 chronic localized Segmental sternum dislocation
HET F #1 Lung [MA:0000415] 0 0
HOM F #2 Spinal cord [MA:0000216] 0 0
HET F #1 Nasal cavity [MA:0000284] 0 0
HOM F #5 Thyroid 0 0
HET F #1 Salivary gland [MA:0000346] 0 0
HET M #7 Thyroid 0 0
HOM F #2 Bone marrow [MA:0000134] 0 0
HOM F #5 Bone marrow [MA:0000134] 0 0
HOM M #3 Epididymis [MA:0000397] 0 0
HOM M #4 Mammary gland [MA:0000145] Not applicable
HOM M #3 Seminal vesicle [MA:0000410] 0 0
HOM M #4 Liver [MA:0000358] 0 0
HET M #7 Pituitary gland [MA:0000176] 0 0
HET M #7 Pancreas [MA:0000120] 0 0
HET F #1 Liver [MA:0000358] 0 0
HET F #1 Adrenal gland [MA:0000116] 0 0
HOM F #5 Lung [MA:0000415] 0 0
HOM F #2 Small intestine [MA:0000337] 0 0
HOM F #5 Ear [MA:0000236] 0 0
HOM F #5 Small intestine [MA:0000337] 0 0
HET F #8 Skin [MA:0000151] 0 0
HOM M #3 Spleen [MA:0000141] 0 0
HOM M #3 Urinary bladder [MA:0000380] 0 0
HOM F #2 Ear [MA:0000236] 0 0
HET M #6 Skin [MA:0000151] 0 0
HOM F #2 White adipose tissue [MA:0000058] 0 0
HET F #8 Stomach [MA:0000353] 0 0
HET F #8 Testis [MA:0000411] Not applicable
HET F #1 Heart [MA:0000072] 0 0
HET M #7 White adipose tissue [MA:0000058] 0 0
HET F #8 Heart [MA:0000072] 0 0
HET F #1 Seminal vesicle [MA:0000410] Not applicable
HET F #1 Testis [MA:0000411] Not applicable
HET M #6 Ovary [MA:0000384] Not applicable
HET M #7 Tooth [MA:0000348] 0 0
HET M #6 Lymph node [MA:0000139] 0 0
HET F #8 Seminal vesicle [MA:0000410] Not applicable
HET F #1 Small intestine [MA:0000337] 0 0
HET F #1 Urinary bladder [MA:0000380] 0 0
HET F #8 Urinary bladder [MA:0000380] 0 0
HET M #7 Brown adipose tissue [MA:0000057] 0 0
HET M #7 Bone marrow [MA:0000134] 0 0
HOM F #5 White adipose tissue [MA:0000058] 0 0
HET M #7 Tongue [MA:0000347] 0 0
HOM F #2 Gall bladder [MA:0000356] 0 0
HOM F #2 Thyroid 0 0
HOM M #4 Seminal vesicle [MA:0000410] 0 0
HOM M #4 Urinary bladder [MA:0000380] 0 0
HOM F #5 Gall bladder [MA:0000356] 0 0
HOM F #5 Knee joint [MA:0000471] 0 0
HET M #7 Uterus [MA:0000389] Not applicable
HOM M #3 Uterus [MA:0000389] Not applicable
HET M #6 Trachea [MA:0000441] 0 0
HET F #8 Trachea [MA:0000441] 0 0
HOM M #3 Heart [MA:0000072] 0 0
HET M #6 Thymus [MA:0000142] 0 0
HET F #8 Liver [MA:0000358] 0 0
HOM M #3 Liver [MA:0000358] 0 0
HOM M #3 Esophagus [MA:0000352] 0 0
HET F #8 Thymus [MA:0000142] 0 0
HET M #7 Skeletal muscle [MA:0003148] 0 0
HET M #6 Adrenal gland [MA:0000116] 0 0
HET F #8 Adrenal gland [MA:0000116] 0 0
HET F #8 Salivary gland [MA:0000346] 0 0
HOM F #5 Brain [MA:0000168] 0 0
HET M #6 Salivary gland [MA:0000346] 0 0
HOM M #3 Prostate gland [MA:0000404] 0 0
HOM F #2 Knee joint [MA:0000471] 0 0
HET F #1 Skin [MA:0000151] 0 0
HET F #1 Sternum [MA:0001331] 0 0
HET F #1 Kidney [MA:0000368] 0 0
HOM F #2 Nasal cavity [MA:0000284] 0 0
HOM F #2 Brain [MA:0000168] 0 0
HET F #8 Sternum [MA:0001331] 0 0
HOM F #5 Nasal cavity [MA:0000284] 0 0
HET M #7 Spleen [MA:0000141] 0 0
HET F #8 Ovary [MA:0000384] 0 0
HET M #6 Heart [MA:0000072] 0 0
HET M #6 Esophagus [MA:0000352] 0 0
HET F #1 Ovary [MA:0000384] 0 0
HOM M #3 Bone marrow [MA:0000134] 0 0
HET F #1 Spinal cord [MA:0000216] 0 0
HOM M #4 Bone marrow [MA:0000134] 0 0
HOM M #3 Sciatic nerve [MA:0001172] 0 0
HOM F #2 Lung [MA:0000415] 0 0
HOM M #4 Sciatic nerve [MA:0001172] 0 0
HET F #1 Prostate gland [MA:0000404] Not applicable
HOM M #4 Skeletal muscle [MA:0003148] 0 0
HOM M #3 Pituitary gland [MA:0000176] 0 0
HET M #6 Prostate gland [MA:0000404] 0 0
HET M #6 Femur [MA:0001359] 0 0
HET F #8 Prostate gland [MA:0000404] Not applicable
HET F #8 Femur [MA:0001359] 0 0
HOM M #3 Knee joint [MA:0000471] 0 0
HOM M #4 Uterus [MA:0000389] Not applicable
HET F #1 Eye [MA:0000261] 4 0 chronic unilateral Microphtalmia, unilateral
HET F #1 Uterus [MA:0000389] 0 0
HET M #7 Stomach [MA:0000353] 0 0
HET M #6 Brown adipose tissue [MA:0000057] 0 0
HET F #8 Bone marrow [MA:0000134] 0 0
HOM M #4 Ear [MA:0000236] 0 0
HET M #6 Bone marrow [MA:0000134] 0 0
HET M #6 White adipose tissue [MA:0000058] 0 0
HET F #8 Brown adipose tissue [MA:0000057] 0 0
HET F #8 White adipose tissue [MA:0000058] 0 0
HOM F #5 Stomach [MA:0000353] 0 0
HOM M #4 Prostate gland [MA:0000404] 0 0
HOM M #3 Tooth [MA:0000348] 0 0
HET M #6 Pituitary gland [MA:0000176] 0 0
HOM M #3 Testis [MA:0000411] 0 0
HET F #8 Pituitary gland [MA:0000176] 0 0
HET F #1 Trachea [MA:0000441] 0 0
HET F #1 Large intestine [MA:0000333] 0 0
HET F #1 Mammary gland [MA:0000145] 0 0
HOM F #5 Large intestine [MA:0000333] 0 0
HET M #6 Sternum [MA:0001331] 0 0
HOM F #2 Large intestine [MA:0000333] 0 0
HET F #8 Tongue [MA:0000347] 0 0
HOM F #5 Trachea [MA:0000441] 0 0
HET M #6 Uterus [MA:0000389] Not applicable
HET M #7 Large intestine [MA:0000333] 0 0
HET M #7 Trachea [MA:0000441] 0 0
HET F #8 Thyroid 0 0
HET F #1 Tongue [MA:0000347] 0 0
HOM F #2 Stomach [MA:0000353] 0 0
HOM F #5 Mammary gland [MA:0000145] 0 0
HOM F #2 Testis [MA:0000411] Not applicable
HOM F #2 Eye [MA:0000261] 0 0
HOM F #5 Eye [MA:0000261] 0 0
HET M #7 Seminal vesicle [MA:0000410] 0 0
HOM M #4 Optic II nerve [MA:0001097] 0 0
HET M #7 Mammary gland [MA:0000145] Not applicable
HOM F #2 Optic II nerve [MA:0001097] 0 0
HOM M #3 Optic II nerve [MA:0001097] 0 0
HET M #7 Testis [MA:0000411] 0 0
HOM M #4 White adipose tissue [MA:0000058] 0 0
HET M #7 Eye [MA:0000261] 0 0
HET M #6 Epididymis [MA:0000397] 0 0
HET F #1 Stomach [MA:0000353] 0 0
HOM F #2 Mammary gland [MA:0000145] 0 0
HOM M #3 White adipose tissue [MA:0000058] 0 0
HOM F #2 Seminal vesicle [MA:0000410] Not applicable
HOM F #5 Testis [MA:0000411] Not applicable
HET M #7 Optic II nerve [MA:0001097] 0 0
HOM F #5 Urinary bladder [MA:0000380] 0 0
HET M #6 Eye [MA:0000261] 0 0
HET M #7 Lymph node [MA:0000139] 0 0
HOM F #2 Uterus [MA:0000389] 0 0
HOM M #4 Tooth [MA:0000348] 0 0
HOM M #3 Mammary gland [MA:0000145] Not applicable
HET F #8 Eye [MA:0000261] 0 0
HOM M #3 Skin [MA:0000151] 0 0
HOM M #4 Knee joint [MA:0000471] 0 0
HOM F #2 Adrenal gland [MA:0000116] 0 0
HOM F #2 Urinary bladder [MA:0000380] 0 0
HOM F #5 Uterus [MA:0000389] 0 0
HOM F #5 Optic II nerve [MA:0001097] 0 0
HET F #1 Brown adipose tissue [MA:0000057] 0 0
HET M #7 Epididymis [MA:0000397] 0 0
HET F #1 Femur [MA:0001359] 0 0
HOM F #5 Seminal vesicle [MA:0000410] Not applicable
HOM F #2 Salivary gland [MA:0000346] 0 0
HET M #6 Liver [MA:0000358] 0 0
HOM F #5 Ovary [MA:0000384] 0 0
HET M #6 Spleen [MA:0000141] 0 0
HOM F #2 Trachea [MA:0000441] 0 0
HOM F #2 Sternum [MA:0001331] 0 0
HET F #8 Large intestine [MA:0000333] 0 0
HET M #6 Large intestine [MA:0000333] 0 0
HET F #1 Pituitary gland [MA:0000176] 0 0
HET M #6 Stomach [MA:0000353] 0 0
HOM M #3 Eye [MA:0000261] 0 0
HOM M #4 Spinal cord [MA:0000216] 0 0
HOM F #5 Prostate gland [MA:0000404] Not applicable
HOM M #4 Thyroid 0 0
HET M #6 Tongue [MA:0000347] 0 0
HOM M #3 Thyroid 0 0
HOM F #2 Prostate gland [MA:0000404] Not applicable
HOM M #3 Pancreas [MA:0000120] 0 0
HET F #8 Brain [MA:0000168] 0 0
HOM M #4 Eye [MA:0000261] 0 0
HET M #7 Femur [MA:0001359] 0 0
HOM M #4 Femur [MA:0001359] 0 0
HET F #1 Epididymis [MA:0000397] Not applicable
HOM F #2 Ovary [MA:0000384] 0 0
HOM M #4 Skin [MA:0000151] 0 0
HOM M #4 Pancreas [MA:0000120] 0 0
HOM M #3 Skeletal muscle [MA:0003148] 0 0
HET F #8 Epididymis [MA:0000397] Not applicable
HOM F #2 Brown adipose tissue [MA:0000057] 0 0
HOM F #5 Pituitary gland [MA:0000176] 0 0
HOM M #4 Small intestine [MA:0000337] 0 0
HOM M #3 Adrenal gland [MA:0000116] 0 0
HOM F #5 Brown adipose tissue [MA:0000057] 0 0
HOM M #3 Ovary [MA:0000384] Not applicable
HOM F #2 Pancreas [MA:0000120] 0 0
HET M #7 Lung [MA:0000415] 0 0
HOM F #2 Pituitary gland [MA:0000176] 0 0
HOM M #4 Tibia [MA:0001361] 0 0
HOM M #3 Kidney [MA:0000368] 0 0
HET F #1 Lymph node [MA:0000139] 0 0
HOM M #4 Thymus [MA:0000142] 0 0
HOM F #2 Tooth [MA:0000348] 0 0
HET M #7 Ear [MA:0000236] 0 0
HET M #7 Small intestine [MA:0000337] 0 0
HET F #1 Spleen [MA:0000141] 0 0
HET F #8 Optic II nerve [MA:0001097] 0 0
HOM M #3 Stomach [MA:0000353] 0 0
HET F #8 Mammary gland [MA:0000145] 0 0
HET F #1 Optic II nerve [MA:0001097] 0 0
HET F #1 Thyroid 0 0
HET M #6 Brain [MA:0000168] 0 0
HET M #7 Salivary gland [MA:0000346] 0 0
HOM M #3 Lung [MA:0000415] 0 0
HOM F #5 Sternum [MA:0001331] 0 0
HOM F #5 Tongue [MA:0000347] 0 0
HOM F #5 Pancreas [MA:0000120] 0 0
HOM F #5 Tooth [MA:0000348] 0 0
HOM M #3 Tongue [MA:0000347] 0 0
HET M #6 Nasal cavity [MA:0000284] 0 0
HOM F #5 Adrenal gland [MA:0000116] 0 0
HOM F #2 Tongue [MA:0000347] 0 0
HET M #6 Sciatic nerve [MA:0001172] 0 0
HET F #8 Tibia [MA:0001361] 0 0
HET M #7 Adrenal gland [MA:0000116] 0 0
HOM F #5 Salivary gland [MA:0000346] 0 0
HOM F #2 Esophagus [MA:0000352] 0 0
HET M #7 Urinary bladder [MA:0000380] 0 0
HOM M #4 Adrenal gland [MA:0000116] 0 0
HOM M #3 Small intestine [MA:0000337] 0 0
HOM M #4 Salivary gland [MA:0000346] 0 0
HOM F #2 Lymph node [MA:0000139] 0 0
HET M #7 Ovary [MA:0000384] Not applicable
HOM F #5 Lymph node [MA:0000139] 4 0 localized chronic B-cell lymphoma
HOM M #3 Brain [MA:0000168] 0 0
HOM M #3 Ear [MA:0000236] 0 0
HOM M #4 Pituitary gland [MA:0000176] 0 0
HOM F #5 Esophagus [MA:0000352] 0 0
HOM F #2 Epididymis [MA:0000397] Not applicable
HET F #1 Bone marrow [MA:0000134] 0 0
HET M #7 Thymus [MA:0000142] 0 0
HET M #7 Sternum [MA:0001331] 0 0
HET F #8 Spleen [MA:0000141] 0 0
HOM M #4 Large intestine [MA:0000333] 0 0
HET F #1 White adipose tissue [MA:0000058] 0 0
HOM M #4 Testis [MA:0000411] 0 0
HET M #7 Liver [MA:0000358] 0 0
HOM F #5 Epididymis [MA:0000397] Not applicable
HET M #7 Spinal cord [MA:0000216] 0 0
HET M #6 Gall bladder [MA:0000356] 0 0
HET M #7 Prostate gland [MA:0000404] 0 0
HET M #6 Mammary gland [MA:0000145] Not applicable
HOM M #3 Large intestine [MA:0000333] 0 0
HET M #6 Thyroid 0 0
HET F #8 Uterus [MA:0000389] 0 0
HOM F #2 Femur [MA:0001359] 0 0
HET M #7 Kidney [MA:0000368] 0 0
HET M #6 Tibia [MA:0001361] 0 0
HOM M #3 Brown adipose tissue [MA:0000057] 0 0
HOM F #5 Femur [MA:0001359] 0 0
HOM M #4 Ovary [MA:0000384] Not applicable
HOM M #4 Brown adipose tissue [MA:0000057] 0 0

Associated histopathology images

Spred3
homozygote
Lymph node - MA term MA:0000139
Spred3em1(IMPC)Tcp
experimental

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