Histopathology data for Selenot

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #1 Large intestine [MA:0000333]
HOM F #2 Spleen [MA:0000141]
HOM M #4 Bone [MA:0001459]
HOM M #3 Bone [MA:0001459]
HOM F #1 Stomach [MA:0000353]
HOM M #4 Ear [MA:0000236]
HOM M #4 Thymus [MA:0000142]
HOM F #1 Spleen [MA:0000141]
HOM F #2 Stomach [MA:0000353]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #4 Prostate gland [MA:0000404]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #2 Large intestine [MA:0000333]
HOM F #1 Ear [MA:0000236]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #2 Ear [MA:0000236]
HOM F #1 Heart [MA:0000072]
HOM F #1 Brain [MA:0000168]
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Trachea [MA:0000441]
HOM F #1 Lung [MA:0000415]
HOM M #3 Lymph node [MA:0000139] 2 0 Lymph node, mesenteric: Moderate, follicular and paracortical lymphoid hyperplasia
HOM M #3 Testis [MA:0000411]
HOM F #2 Uterus [MA:0000389]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #1 Kidney [MA:0000368]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #4 Femur [MA:0001359]
HOM M #3 Tooth [MA:0000348]
HOM F #2 Esophagus [MA:0000352]
HOM M #4 Tibia [MA:0001361]
HOM M #4 Sternum [MA:0001331]
HOM F #2 Bone marrow [MA:0000134]
HOM M #3 Salivary gland [MA:0000346]
HOM F #2 Skin [MA:0000151]
HOM F #2 Spinal cord [MA:0000216]
HOM F #1 Tongue [MA:0000347]
HOM F #2 Sternum [MA:0001331]
HOM M #3 Knee joint [MA:0000471]
HOM F #2 Femur [MA:0001359]
HOM F #2 Ovary [MA:0000384]
HOM F #1 Sciatic nerve [MA:0001172]
HOM M #3 Tibia [MA:0001361]
HOM M #3 Thymus [MA:0000142]
HOM M #3 Skin [MA:0000151]
HOM M #4 Kidney [MA:0000368]
HOM F #1 Lymph node [MA:0000139] 2 0 Lymph node, mesenteric: Moderate, paracortical lymphoid hyperplasia
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #2 Lymph node [MA:0000139]
HOM M #4 Spleen [MA:0000141]
HOM M #3 Pancreas [MA:0000120]
HOM F #2 Gall bladder [MA:0000356]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #4 Skin [MA:0000151]
HOM M #3 Tongue [MA:0000347]
HOM F #1 Small intestine [MA:0000337]
HOM M #4 Pancreas [MA:0000120]
HOM M #4 Liver [MA:0000358]
HOM F #2 Small intestine [MA:0000337]
HOM M #4 Thyroid
HOM M #4 Brain [MA:0000168]
HOM M #4 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, follicular lymphoid hyperplasia
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Brain [MA:0000168]
HOM F #2 Tongue [MA:0000347]
HOM M #3 Eye [MA:0000261]
HOM F #2 Tibia [MA:0001361]
HOM F #1 Bone [MA:0001459] 2 0 Skull: Focal, moderate fibro-osseous lesion
HOM M #3 Spleen [MA:0000141]
HOM F #1 Uterus [MA:0000389]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #4 Spinal cord [MA:0000216]
HOM M #3 Thyroid
HOM F #1 Esophagus [MA:0000352]
HOM M #3 Gall bladder [MA:0000356]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #4 Knee joint [MA:0000471]
HOM M #4 Lung [MA:0000415]
HOM F #2 Kidney [MA:0000368]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #1 Bone marrow [MA:0000134]
HOM M #4 Tongue [MA:0000347]
HOM F #1 Ovary [MA:0000384]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #2 Tooth [MA:0000348]
HOM M #3 Femur [MA:0001359]
HOM M #4 Eye [MA:0000261]
HOM F #1 Tooth [MA:0000348]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #1 Salivary gland [MA:0000346]
HOM M #3 Spinal cord [MA:0000216]
HOM M #3 Epididymis [MA:0000397] 2 1 Epididymis: Luminal cell debris with decreased spermatozoa
HOM F #2 Salivary gland [MA:0000346]
HOM F #1 Knee joint [MA:0000471]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #3 Kidney [MA:0000368]
HOM F #2 Knee joint [MA:0000471]
HOM M #3 Sternum [MA:0001331]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Liver [MA:0000358]
HOM F #1 Tibia [MA:0001361]
HOM F #2 Thymus [MA:0000142]
HOM F #2 Thyroid
HOM F #2 Mammary gland [MA:0000145]
HOM M #3 Stomach [MA:0000353]
HOM M #3 Prostate gland [MA:0000404]
HOM M #4 Esophagus [MA:0000352]
HOM M #4 Large intestine [MA:0000333]
HOM F #2 Bone [MA:0001459]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #3 Urinary bladder [MA:0000380]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #3 Brain [MA:0000168]
HOM F #2 Eye [MA:0000261]
HOM M #4 Heart [MA:0000072]
HOM F #2 Pancreas [MA:0000120]
HOM M #3 Small intestine [MA:0000337]
HOM M #3 Liver [MA:0000358]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #4 Salivary gland [MA:0000346]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM F #1 Trachea [MA:0000441]
HOM M #4 Tooth [MA:0000348]
HOM F #2 Nasal cavity [MA:0000284]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #3 Lung [MA:0000415]
HOM M #4 Gall bladder [MA:0000356]
HOM M #3 Esophagus [MA:0000352]
HOM M #3 Bone marrow [MA:0000134]
HOM F #2 Trachea [MA:0000441]
HOM F #1 Gall bladder [MA:0000356]
HOM F #1 Thyroid
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #4 Testis [MA:0000411]
HOM M #3 Heart [MA:0000072]
HOM M #3 Sciatic nerve [MA:0001172]
HOM F #2 Heart [MA:0000072]
HOM F #2 Liver [MA:0000358]
HOM F #1 Mammary gland [MA:0000145]
HOM F #2 Lung [MA:0000415]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #4 Sciatic nerve [MA:0001172]
HOM F #1 Pancreas [MA:0000120]
HOM M #4 Bone marrow [MA:0000134]
HOM F #1 Skin [MA:0000151]
HOM M #4 Epididymis [MA:0000397] 2 1 Epididymis: Luminal cell debris with decreased spermatozoa
HOM F #1 Sternum [MA:0001331]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Eye [MA:0000261]
HOM M #3 Large intestine [MA:0000333]
HOM M #4 Stomach [MA:0000353]
HOM M #3 Ear [MA:0000236]
HOM F #1 Femur [MA:0001359]

Associated histopathology images

Selenot
homozygote
Epididymis - MA term MA:0000397
Selenotem1(IMPC)Mbp
experimental
Selenot
homozygote
Epididymis - MA term MA:0000397
Selenotem1(IMPC)Mbp
experimental

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