Histopathology data for Saxo5

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #4 Urinary bladder [MA:0000380] 0 0
HOM M #1 Esophagus [MA:0000352] 0 0
HOM F #4 Sciatic nerve [MA:0001172] 0 0
HOM M #3 Lung [MA:0000415] 0 0
HOM M #1 Uterus [MA:0000389] Not applicable
HOM M #3 Optic II nerve [MA:0001097] 0 0
HOM M #1 Trachea [MA:0000441] 0 0
HOM F #2 Eye [MA:0000261] 0 0
HOM F #4 Thymus [MA:0000142] 0 0
HOM F #4 Bone marrow [MA:0000134] 0 0
HOM M #1 Epididymis [MA:0000397] 0 0
HOM M #3 Mammary gland [MA:0000145] Not applicable
HOM M #1 Kidney [MA:0000368] 0 0
HOM F #4 Testis [MA:0000411] Not applicable
HOM M #1 Brain [MA:0000168] 0 0
HOM M #1 Gall bladder [MA:0000356] 0 0
HOM M #1 Seminal vesicle [MA:0000410] 0 0
HOM M #3 Skin [MA:0000151] 0 0
HOM F #4 Adrenal gland [MA:0000116] 0 0
HOM F #4 Lung [MA:0000415] 0 0
HOM M #3 Urinary bladder [MA:0000380] 0 0
HOM F #2 Salivary gland [MA:0000346] 0 0
HOM M #1 Skeletal muscle [MA:0003148] 0 0
HOM M #1 Liver [MA:0000358] 0 0
HOM M #3 Eye [MA:0000261] 0 0
HOM M #1 Spleen [MA:0000141] 0 0
HOM M #3 Pancreas [MA:0000120] 0 0
HOM M #3 Testis [MA:0000411] 0 0
HOM M #1 Thyroid 0 0
HOM F #2 Heart [MA:0000072] 0 0
HOM F #2 Pancreas [MA:0000120] 0 0
HOM M #1 Lymph node [MA:0000139] 0 0
HOM F #2 Mammary gland [MA:0000145] 0 0
HOM F #2 Bone marrow [MA:0000134] 0 0
HOM M #1 Femur [MA:0001359] 0 0
HOM M #1 Urinary bladder [MA:0000380] 0 0
HOM M #3 Small intestine [MA:0000337] 0 0
HOM F #2 Optic II nerve [MA:0001097] 0 0
HOM F #4 Brain [MA:0000168] 0 0
HOM M #3 Thyroid 0 0
HOM F #4 Trachea [MA:0000441] 0 0
HOM F #2 Spleen [MA:0000141] 0 0
HOM M #3 Liver [MA:0000358] 0 0
HOM F #2 Sciatic nerve [MA:0001172] 0 0
HOM M #1 Spinal cord [MA:0000216] 0 0
HOM F #4 Gall bladder [MA:0000356] 0 0
HOM F #4 Kidney [MA:0000368] 0 0
HOM M #1 Large intestine [MA:0000333] 0 0
HOM F #2 Lung [MA:0000415] 0 0
HOM F #4 Seminal vesicle [MA:0000410] Not applicable
HOM F #4 Pancreas [MA:0000120] 0 0
HOM F #2 Skeletal muscle [MA:0003148] 0 0
HOM M #1 Adrenal gland [MA:0000116] 0 0
HOM M #1 Heart [MA:0000072] 0 0
HOM F #2 Gall bladder [MA:0000356] 0 0
HOM M #3 Sciatic nerve [MA:0001172] 0 0
HOM F #4 Small intestine [MA:0000337] 0 0
HOM F #2 Ovary [MA:0000384] 0 0
HOM F #4 Skeletal muscle [MA:0003148] 0 0
HOM F #2 Small intestine [MA:0000337] 0 0
HOM M #3 Thymus [MA:0000142] 0 0
HOM F #4 Mammary gland [MA:0000145] 0 0
HOM F #2 Brain [MA:0000168] 0 0
HOM M #1 Stomach [MA:0000353] 1 0 multi-localised subacute Gastritis, suppurative.
HOM M #3 Bone marrow [MA:0000134] 0 0
HOM F #4 Thyroid 0 0
HOM M #3 Brain [MA:0000168] 0 0
HOM F #4 Optic II nerve [MA:0001097] 0 0
HOM M #3 Gall bladder [MA:0000356] 0 0
HOM M #1 Salivary gland [MA:0000346] 0 0
HOM M #3 Seminal vesicle [MA:0000410] 0 0
HOM F #4 Liver [MA:0000358] 0 0
HOM F #2 Seminal vesicle [MA:0000410] Not applicable
HOM F #2 Thymus [MA:0000142] 0 0
HOM F #2 Thyroid 0 0
HOM F #4 Femur [MA:0001359] 0 0
HOM M #1 Prostate gland [MA:0000404] 0 0
HOM F #4 Spinal cord [MA:0000216] 0 0
HOM F #2 Trachea [MA:0000441] 0 0
HOM F #4 Spleen [MA:0000141] 0 0
HOM M #3 Ovary [MA:0000384] Not applicable
HOM M #3 Spleen [MA:0000141] 0 0
HOM M #3 Skeletal muscle [MA:0003148] 0 0
HOM M #3 Stomach [MA:0000353] 0 0
HOM M #1 Eye [MA:0000261] 0 0
HOM M #1 Pancreas [MA:0000120] 0 0
HOM F #4 Heart [MA:0000072] 0 0
HOM F #2 Liver [MA:0000358] 0 0
HOM M #3 Lymph node [MA:0000139] 0 0
HOM M #3 Femur [MA:0001359] 0 0
HOM M #1 Skin [MA:0000151] 0 0
HOM M #1 Small intestine [MA:0000337] 0 0
HOM M #3 Uterus [MA:0000389] Not applicable
HOM F #4 Large intestine [MA:0000333] 0 0
HOM F #2 Uterus [MA:0000389] 0 0
HOM F #4 Epididymis [MA:0000397] Not applicable
HOM F #4 Ovary [MA:0000384] 0 0
HOM F #4 Stomach [MA:0000353] 0 0
HOM M #1 Mammary gland [MA:0000145] Not applicable
HOM F #4 Salivary gland [MA:0000346] 0 0
HOM M #3 Kidney [MA:0000368] 0 0
HOM M #1 Optic II nerve [MA:0001097] 0 0
HOM F #2 Kidney [MA:0000368] 0 0
HOM F #2 Testis [MA:0000411] Not applicable
HOM M #3 Heart [MA:0000072] 0 0
HOM F #2 Esophagus [MA:0000352] 0 0
HOM M #3 Esophagus [MA:0000352] 0 0
HOM F #4 Esophagus [MA:0000352] 0 0
HOM F #2 Stomach [MA:0000353] 0 0
HOM F #4 Uterus [MA:0000389] 0 0
HOM M #1 Sciatic nerve [MA:0001172] 0 0
HOM F #2 Spinal cord [MA:0000216] 0 0
HOM F #4 Eye [MA:0000261] 0 0
HOM F #4 Prostate gland [MA:0000404] Not applicable
HOM M #1 Thymus [MA:0000142] 0 0
HOM F #2 Lymph node [MA:0000139] 0 0
HOM M #3 Trachea [MA:0000441] 0 0
HOM F #2 Femur [MA:0001359] 0 0
HOM M #1 Testis [MA:0000411] 0 0
HOM M #1 Bone marrow [MA:0000134] 0 0
HOM F #2 Urinary bladder [MA:0000380] 0 0
HOM M #3 Salivary gland [MA:0000346] 0 0
HOM F #2 Skin [MA:0000151] 0 0
HOM F #4 Skin [MA:0000151] 0 0
HOM M #1 Lung [MA:0000415] 0 0
HOM F #2 Prostate gland [MA:0000404] Not applicable
HOM M #1 Ovary [MA:0000384] Not applicable
HOM F #2 Large intestine [MA:0000333] 0 0
HOM M #3 Prostate gland [MA:0000404] 0 0
HOM F #2 Epididymis [MA:0000397] Not applicable
HOM M #3 Epididymis [MA:0000397] 0 0
HOM M #3 Adrenal gland [MA:0000116] 0 0
HOM M #3 Spinal cord [MA:0000216] 0 0
HOM M #3 Large intestine [MA:0000333] 0 0
HOM F #2 Adrenal gland [MA:0000116] 0 0
HOM F #4 Lymph node [MA:0000139] 0 0

Associated histopathology images

Saxo5
homozygote
Stomach - MA term MA:0000353
Saxo5tm3b(KOMP)Wtsi
experimental

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