Histopathology data for Pak5

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #1 Brown adipose tissue [MA:0000057]
HOM M #2 Esophagus [MA:0000352]
HOM F #4 Femur [MA:0001359]
HOM M #1 Small intestine [MA:0000337]
HOM M #1 Tibia [MA:0001361]
HOM M #2 Skeletal muscle [MA:0003148]
HOM F #3 Ovary [MA:0000384]
HOM F #3 Femur [MA:0001359]
HOM M #2 Heart [MA:0000072]
HOM M #1 Liver [MA:0000358]
HOM M #2 Eye [MA:0000261] 1 0 Eye: Mild, focal retinal dysplasia
HOM F #4 Adrenal gland [MA:0000116]
HOM M #2 Tongue [MA:0000347]
HOM M #2 Sciatic nerve [MA:0001172]
HOM M #1 Thymus [MA:0000142]
HOM M #2 Skin [MA:0000151]
HOM M #2 Bone marrow [MA:0000134]
HOM F #3 Adrenal gland [MA:0000116]
HOM F #3 Large intestine [MA:0000333]
HOM M #2 Prostate gland [MA:0000404]
HOM F #4 Sternum [MA:0001331]
HOM M #2 Trachea [MA:0000441]
HOM M #2 Lymph node [MA:0000139]
HOM M #2 Stomach [MA:0000353]
HOM M #2 Nasal cavity [MA:0000284]
HOM F #4 Brown adipose tissue [MA:0000057]
HOM F #4 Urinary bladder [MA:0000380]
HOM F #3 Kidney [MA:0000368]
HOM M #2 Lung [MA:0000415]
HOM F #4 Thymus [MA:0000142]
HOM M #2 Brain [MA:0000168]
HOM F #4 Spinal cord [MA:0000216]
HOM F #4 Ovary [MA:0000384]
HOM M #2 Salivary gland [MA:0000346]
HOM M #2 Knee joint [MA:0000471]
HOM F #4 Mammary gland [MA:0000145]
HOM F #3 Spleen [MA:0000141]
HOM M #1 Kidney [MA:0000368]
HOM F #3 Uterus [MA:0000389] 1 0 Uterus: Mild, stromal edema
HOM M #1 Tooth [MA:0000348]
HOM M #1 Knee joint [MA:0000471]
HOM F #3 Tibia [MA:0001361]
HOM F #3 Tongue [MA:0000347] 1 0 Tongue: Focal, gland cyst
HOM F #4 Ear [MA:0000236]
HOM F #4 Lung [MA:0000415]
HOM M #2 Seminal vesicle [MA:0000410]
HOM M #2 Urinary bladder [MA:0000380]
HOM M #2 Bone [MA:0001459]
HOM M #1 Epididymis [MA:0000397]
HOM F #3 Small intestine [MA:0000337]
HOM F #3 Ear [MA:0000236]
HOM M #1 Sternum [MA:0001331]
HOM F #3 Brain [MA:0000168]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM F #4 Stomach [MA:0000353]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM F #3 Bone marrow [MA:0000134]
HOM F #4 Large intestine [MA:0000333]
HOM M #1 Spleen [MA:0000141]
HOM M #1 Pancreas [MA:0000120]
HOM M #1 Femur [MA:0001359]
HOM M #1 Gall bladder [MA:0000356]
HOM F #3 Sciatic nerve [MA:0001172]
HOM M #1 Thyroid
HOM M #1 Spinal cord [MA:0000216]
HOM F #3 Esophagus [MA:0000352]
HOM F #3 Urinary bladder [MA:0000380]
HOM M #1 Eye [MA:0000261]
HOM F #4 Heart [MA:0000072]
HOM M #1 Skin [MA:0000151]
HOM F #4 Liver [MA:0000358]
HOM M #2 Ear [MA:0000236]
HOM M #2 Large intestine [MA:0000333]
HOM M #1 Skeletal muscle [MA:0003148]
HOM M #1 Bone marrow [MA:0000134]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM F #3 Bone [MA:0001459]
HOM F #3 Salivary gland [MA:0000346]
HOM F #3 Knee joint [MA:0000471]
HOM M #1 Esophagus [MA:0000352]
HOM F #4 Lymph node [MA:0000139]
HOM F #4 Salivary gland [MA:0000346]
HOM M #2 Liver [MA:0000358]
HOM F #3 Thyroid
HOM F #3 Gall bladder [MA:0000356]
HOM M #2 Tibia [MA:0001361]
HOM F #3 Trachea [MA:0000441]
HOM F #4 Knee joint [MA:0000471]
HOM M #2 Thymus [MA:0000142]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #2 Spinal cord [MA:0000216]
HOM F #3 Lymph node [MA:0000139]
HOM F #4 Trachea [MA:0000441]
HOM F #4 Thyroid
HOM F #4 Gall bladder [MA:0000356]
HOM F #4 Bone marrow [MA:0000134]
HOM M #1 Prostate gland [MA:0000404]
HOM M #1 Trachea [MA:0000441]
HOM F #4 Tooth [MA:0000348]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM F #4 Sciatic nerve [MA:0001172]
HOM M #2 Testis [MA:0000411]
HOM M #1 Brain [MA:0000168]
HOM M #1 Heart [MA:0000072]
HOM F #4 Skin [MA:0000151]
HOM M #1 Nasal cavity [MA:0000284]
HOM F #4 Eye [MA:0000261]
HOM F #4 Uterus [MA:0000389] 2 0 Uterus: Moderate, stromal edema
HOM M #1 Tongue [MA:0000347]
HOM M #1 Lymph node [MA:0000139]
HOM M #1 Stomach [MA:0000353]
HOM F #4 Esophagus [MA:0000352]
HOM M #1 Lung [MA:0000415]
HOM F #4 Bone [MA:0001459]
HOM M #2 Small intestine [MA:0000337]
HOM M #2 Tooth [MA:0000348]
HOM F #3 Liver [MA:0000358]
HOM M #1 Adrenal gland [MA:0000116]
HOM F #3 Mammary gland [MA:0000145]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #1 Urinary bladder [MA:0000380]
HOM F #3 Skin [MA:0000151]
HOM F #3 Thymus [MA:0000142]
HOM M #1 Salivary gland [MA:0000346]
HOM F #4 Pancreas [MA:0000120]
HOM M #1 Bone [MA:0001459]
HOM M #2 Spleen [MA:0000141]
HOM F #4 Tongue [MA:0000347]
HOM M #2 Adrenal gland [MA:0000116]
HOM F #3 Heart [MA:0000072]
HOM M #1 Large intestine [MA:0000333]
HOM F #3 Pancreas [MA:0000120]
HOM F #4 Skeletal muscle [MA:0003148]
HOM F #4 Small intestine [MA:0000337]
HOM F #4 Brain [MA:0000168]
HOM M #2 Epididymis [MA:0000397]
HOM F #3 Stomach [MA:0000353]
HOM F #3 Lung [MA:0000415]
HOM M #1 Testis [MA:0000411]
HOM M #2 Kidney [MA:0000368]
HOM F #3 Skeletal muscle [MA:0003148]
HOM M #2 Sternum [MA:0001331]
HOM M #2 Pancreas [MA:0000120]
HOM F #3 Nasal cavity [MA:0000284]
HOM M #2 Femur [MA:0001359]
HOM F #3 Eye [MA:0000261] 1 0 Eye: Mild, rare retinal dysplasia
HOM M #2 Gall bladder [MA:0000356]
HOM F #4 Spleen [MA:0000141]
HOM F #4 Trigeminal V ganglion [MA:0001080]
HOM M #2 Thyroid
HOM F #4 Kidney [MA:0000368]
HOM F #3 Spinal cord [MA:0000216]
HOM M #1 Ear [MA:0000236]
HOM F #3 Sternum [MA:0001331]
HOM F #3 Tooth [MA:0000348]
HOM M #1 Sciatic nerve [MA:0001172]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM F #4 Tibia [MA:0001361]

Associated histopathology images

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