Histopathology data for Or9g4

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #2 Brown adipose tissue [MA:0000057]
HOM M #5 Large intestine [MA:0000333]
HOM F #6 Liver [MA:0000358]
HOM M #4 Prostate gland [MA:0000404]
HOM M #3 Sternum [MA:0001331]
HOM M #3 Kidney [MA:0000368]
HOM F #7 Pancreas [MA:0000120]
HOM F #1 Tooth [MA:0000348]
HOM M #2 Spinal cord [MA:0000216]
HOM M #2 Thymus [MA:0000142]
HOM M #4 Ear [MA:0000236]
HOM M #4 Large intestine [MA:0000333]
HOM F #6 Tibia [MA:0001361]
HOM M #2 Tibia [MA:0001361]
HOM F #1 Knee joint [MA:0000471]
HOM M #5 Urinary bladder [MA:0000380]
HOM M #5 Seminal vesicle [MA:0000410]
HOM M #2 Liver [MA:0000358]
HOM F #8 Thyroid
HOM M #5 Prostate gland [MA:0000404]
HOM F #6 Brown adipose tissue [MA:0000057]
HOM M #3 Spleen [MA:0000141]
HOM F #7 Mammary gland [MA:0000145]
HOM F #7 Bone [MA:0001459]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Brain [MA:0000168]
HOM M #2 Femur [MA:0001359]
HOM M #5 Femur [MA:0001359]
HOM F #8 Uterus [MA:0000389]
HOM M #5 Ear [MA:0000236]
HOM F #7 Knee joint [MA:0000471]
HOM M #3 Heart [MA:0000072]
HOM F #6 Thymus [MA:0000142]
HOM M #3 Stomach [MA:0000353]
HOM F #8 Skeletal muscle [MA:0003148]
HOM F #6 Salivary gland [MA:0000346]
HOM F #8 Skin [MA:0000151]
HOM M #5 Skin [MA:0000151]
HOM F #6 Small intestine [MA:0000337]
HOM F #8 Bone [MA:0001459]
HOM F #7 Tooth [MA:0000348]
HOM F #8 Eye [MA:0000261]
HOM F #8 Bone marrow [MA:0000134]
HOM M #3 Lung [MA:0000415]
HOM M #5 Skeletal muscle [MA:0003148]
HOM M #5 Bone marrow [MA:0000134]
HOM F #6 Femur [MA:0001359]
HOM F #1 Bone marrow [MA:0000134]
HOM M #2 Large intestine [MA:0000333]
HOM F #6 Gall bladder [MA:0000356]
HOM F #7 Bone marrow [MA:0000134]
HOM F #6 Lymph node [MA:0000139]
HOM M #5 Small intestine [MA:0000337]
HOM F #8 Adrenal gland [MA:0000116]
HOM F #6 Spinal cord [MA:0000216]
HOM F #8 Urinary bladder [MA:0000380]
HOM F #1 Ear [MA:0000236]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #3 Gall bladder [MA:0000356]
HOM M #4 Bone marrow [MA:0000134]
HOM M #3 Pancreas [MA:0000120]
HOM F #7 Ear [MA:0000236]
HOM M #5 Tibia [MA:0001361]
HOM F #1 Bone [MA:0001459]
HOM M #2 Trachea [MA:0000441]
HOM M #4 Testis [MA:0000411]
HOM M #5 Adrenal gland [MA:0000116]
HOM M #3 Epididymis [MA:0000397]
HOM F #1 Ovary [MA:0000384]
HOM F #1 Uterus [MA:0000389]
HOM F #6 Trigeminal V ganglion [MA:0001080]
HOM M #4 Bone [MA:0001459]
HOM M #2 Nasal cavity [MA:0000284]
HOM F #1 Sternum [MA:0001331]
HOM M #5 Trigeminal V ganglion [MA:0001080]
HOM M #2 Esophagus [MA:0000352]
HOM F #6 Heart [MA:0000072]
HOM M #2 Sciatic nerve [MA:0001172]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM M #2 Bone marrow [MA:0000134]
HOM M #2 Eye [MA:0000261]
HOM M #3 Bone [MA:0001459]
HOM M #5 Salivary gland [MA:0000346]
HOM M #5 Knee joint [MA:0000471]
HOM F #1 Adrenal gland [MA:0000116]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM M #5 Testis [MA:0000411]
HOM M #5 Tooth [MA:0000348]
HOM F #7 Lung [MA:0000415]
HOM F #7 Stomach [MA:0000353]
HOM F #8 Small intestine [MA:0000337]
HOM F #7 Skin [MA:0000151]
HOM F #6 Esophagus [MA:0000352]
HOM F #6 Bone marrow [MA:0000134]
HOM F #1 Tongue [MA:0000347]
HOM F #6 Sternum [MA:0001331]
HOM F #8 Thymus [MA:0000142]
HOM F #7 Urinary bladder [MA:0000380]
HOM M #3 Liver [MA:0000358]
HOM M #3 Lymph node [MA:0000139]
HOM M #2 Skin [MA:0000151]
HOM F #6 Uterus [MA:0000389] 2 0 cystic endometrial hyperplasia
HOM F #7 Esophagus [MA:0000352]
HOM M #2 Skeletal muscle [MA:0003148]
HOM F #8 Brown adipose tissue [MA:0000057]
HOM M #5 Brown adipose tissue [MA:0000057]
HOM F #8 Ovary [MA:0000384]
HOM F #1 Heart [MA:0000072]
HOM F #1 Kidney [MA:0000368]
HOM F #7 Uterus [MA:0000389] 2 0 cystic endometrial hyperplasia
HOM F #6 Urinary bladder [MA:0000380]
HOM F #7 Lymph node [MA:0000139]
HOM M #2 Spleen [MA:0000141]
HOM M #4 Trachea [MA:0000441]
HOM M #3 Bone marrow [MA:0000134]
HOM M #5 Eye [MA:0000261]
HOM F #8 Stomach [MA:0000353]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM M #3 Esophagus [MA:0000352]
HOM F #7 Eye [MA:0000261]
HOM M #2 Bone [MA:0001459]
HOM F #8 Knee joint [MA:0000471]
HOM F #8 Tooth [MA:0000348]
HOM M #2 Urinary bladder [MA:0000380]
HOM M #5 Thymus [MA:0000142]
HOM M #4 Nasal cavity [MA:0000284]
HOM M #2 Seminal vesicle [MA:0000410]
HOM F #7 Skeletal muscle [MA:0003148]
HOM F #1 Gall bladder [MA:0000356]
HOM F #6 Sciatic nerve [MA:0001172]
HOM F #8 Ear [MA:0000236]
HOM F #8 Large intestine [MA:0000333]
HOM F #1 Thyroid
HOM M #2 Prostate gland [MA:0000404]
HOM M #4 Knee joint [MA:0000471]
HOM M #4 Skin [MA:0000151]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #8 Lung [MA:0000415]
HOM M #4 Tooth [MA:0000348]
HOM F #1 Spinal cord [MA:0000216]
HOM M #2 Lymph node [MA:0000139]
HOM M #5 Stomach [MA:0000353]
HOM F #1 Mammary gland [MA:0000145]
HOM M #4 Eye [MA:0000261]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #5 Trachea [MA:0000441]
HOM F #1 Pancreas [MA:0000120]
HOM M #5 Nasal cavity [MA:0000284]
HOM F #1 Femur [MA:0001359]
HOM F #7 Spleen [MA:0000141]
HOM M #4 Thymus [MA:0000142]
HOM M #5 Lung [MA:0000415]
HOM M #5 Sternum [MA:0001331]
HOM F #8 Sciatic nerve [MA:0001172]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Lung [MA:0000415]
HOM M #4 Stomach [MA:0000353]
HOM M #5 Kidney [MA:0000368]
HOM M #3 Large intestine [MA:0000333]
HOM F #8 Lymph node [MA:0000139]
HOM F #8 Nasal cavity [MA:0000284]
HOM F #7 Trigeminal V ganglion [MA:0001080]
HOM F #6 Mammary gland [MA:0000145]
HOM F #1 Salivary gland [MA:0000346]
HOM M #4 Brain [MA:0000168]
HOM F #8 Trachea [MA:0000441]
HOM M #3 Urinary bladder [MA:0000380]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #8 Gall bladder [MA:0000356]
HOM F #6 Pancreas [MA:0000120]
HOM M #5 Spleen [MA:0000141]
HOM F #7 Thymus [MA:0000142]
HOM M #4 Kidney [MA:0000368]
HOM M #3 Prostate gland [MA:0000404]
HOM F #7 Small intestine [MA:0000337]
HOM F #6 Bone [MA:0001459]
HOM F #7 Salivary gland [MA:0000346]
HOM M #2 Pancreas [MA:0000120]
HOM M #4 Heart [MA:0000072]
HOM M #4 Spleen [MA:0000141]
HOM M #5 Epididymis [MA:0000397]
HOM M #4 Tongue [MA:0000347]
HOM F #6 Tooth [MA:0000348]
HOM F #6 Knee joint [MA:0000471]
HOM F #8 Esophagus [MA:0000352]
HOM M #3 Adrenal gland [MA:0000116]
HOM F #1 Tibia [MA:0001361]
HOM F #1 Liver [MA:0000358]
HOM F #6 Thyroid
HOM F #8 Trigeminal V ganglion [MA:0001080]
HOM M #2 Sternum [MA:0001331]
HOM F #7 Sciatic nerve [MA:0001172]
HOM M #5 Esophagus [MA:0000352]
HOM M #4 Lymph node [MA:0000139]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #2 Knee joint [MA:0000471]
HOM F #8 Spleen [MA:0000141]
HOM M #2 Epididymis [MA:0000397]
HOM F #1 Lymph node [MA:0000139]
HOM F #1 Small intestine [MA:0000337]
HOM F #6 Eye [MA:0000261]
HOM M #3 Tibia [MA:0001361]
HOM F #7 Brown adipose tissue [MA:0000057]
HOM M #2 Tooth [MA:0000348]
HOM M #3 Thymus [MA:0000142]
HOM F #1 Brain [MA:0000168]
HOM F #7 Trachea [MA:0000441]
HOM F #7 Nasal cavity [MA:0000284]
HOM F #8 Salivary gland [MA:0000346]
HOM M #3 Thyroid
HOM F #8 Brain [MA:0000168]
HOM F #7 Liver [MA:0000358]
HOM F #8 Tongue [MA:0000347]
HOM F #6 Spleen [MA:0000141]
HOM F #6 Kidney [MA:0000368]
HOM M #4 Salivary gland [MA:0000346]
HOM M #5 Tongue [MA:0000347]
HOM M #2 Heart [MA:0000072]
HOM M #3 Femur [MA:0001359]
HOM F #7 Heart [MA:0000072]
HOM M #5 Brain [MA:0000168]
HOM M #3 Spinal cord [MA:0000216]
HOM M #2 Stomach [MA:0000353]
HOM M #3 Skin [MA:0000151]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #3 Eye [MA:0000261]
HOM F #8 Tibia [MA:0001361]
HOM M #2 Lung [MA:0000415]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #8 Kidney [MA:0000368]
HOM M #4 Esophagus [MA:0000352]
HOM M #5 Lymph node [MA:0000139]
HOM F #1 Esophagus [MA:0000352]
HOM F #6 Lung [MA:0000415]
HOM M #4 Pancreas [MA:0000120]
HOM F #6 Ear [MA:0000236]
HOM F #6 Brain [MA:0000168]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #3 Knee joint [MA:0000471]
HOM F #7 Sternum [MA:0001331]
HOM F #1 Spleen [MA:0000141]
HOM F #7 Large intestine [MA:0000333]
HOM F #1 Stomach [MA:0000353]
HOM M #5 Bone [MA:0001459]
HOM F #6 Stomach [MA:0000353]
HOM M #3 Salivary gland [MA:0000346]
HOM F #6 Skeletal muscle [MA:0003148]
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Tooth [MA:0000348]
HOM F #1 Large intestine [MA:0000333]
HOM F #6 Tongue [MA:0000347]
HOM M #3 Testis [MA:0000411]
HOM F #6 Skin [MA:0000151]
HOM F #7 Adrenal gland [MA:0000116]
HOM M #2 Thyroid
HOM M #2 Gall bladder [MA:0000356]
HOM M #5 Thyroid
HOM F #1 Lung [MA:0000415]
HOM F #8 Mammary gland [MA:0000145]
HOM M #5 Gall bladder [MA:0000356] 2 0 epithelial hyalinosis
HOM M #5 Pancreas [MA:0000120]
HOM F #6 Adrenal gland [MA:0000116]
HOM F #7 Brain [MA:0000168]
HOM M #2 Ear [MA:0000236]
HOM F #7 Ovary [MA:0000384]
HOM F #8 Pancreas [MA:0000120]
HOM M #3 Trachea [MA:0000441]
HOM M #5 Sciatic nerve [MA:0001172]
HOM F #8 Sternum [MA:0001331]
HOM M #3 Nasal cavity [MA:0000284]
HOM F #8 Femur [MA:0001359]
HOM F #8 Spinal cord [MA:0000216]
HOM M #4 Tibia [MA:0001361]
HOM M #4 Liver [MA:0000358]
HOM F #7 Spinal cord [MA:0000216]
HOM M #4 Femur [MA:0001359]
HOM F #1 Nasal cavity [MA:0000284]
HOM M #2 Kidney [MA:0000368]
HOM F #6 Trachea [MA:0000441]
HOM F #1 Skeletal muscle [MA:0003148]
HOM F #7 Femur [MA:0001359]
HOM M #5 Spinal cord [MA:0000216]
HOM F #7 Thyroid
HOM M #3 Small intestine [MA:0000337]
HOM F #6 Ovary [MA:0000384]
HOM F #6 Nasal cavity [MA:0000284]
HOM F #1 Trachea [MA:0000441]
HOM F #7 Gall bladder [MA:0000356]
HOM M #4 Thyroid
HOM M #2 Testis [MA:0000411]
HOM F #8 Heart [MA:0000072]
HOM M #2 Tongue [MA:0000347]
HOM F #8 Liver [MA:0000358]
HOM F #7 Tibia [MA:0001361]
HOM M #4 Epididymis [MA:0000397]
HOM M #5 Liver [MA:0000358]
HOM M #2 Brain [MA:0000168]
HOM F #7 Tongue [MA:0000347]
HOM F #7 Kidney [MA:0000368]
HOM M #3 Ear [MA:0000236]
HOM M #5 Heart [MA:0000072]
HOM M #2 Salivary gland [MA:0000346]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Skin [MA:0000151]
HOM M #2 Small intestine [MA:0000337]
HOM F #6 Large intestine [MA:0000333]
HOM F #1 Eye [MA:0000261]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Sternum [MA:0001331]
HOM M #2 Adrenal gland [MA:0000116]

Associated histopathology images

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