Histopathology data for Olah

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM M #3 Urinary bladder [MA:0000380]
HOM F #4 Thymus [MA:0000142]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #4 Ear [MA:0000236]
HOM F #2 Lymph node [MA:0000139]
HOM F #2 Knee joint [MA:0000471]
HOM F #2 Ovary [MA:0000384]
HOM F #4 Knee joint [MA:0000471] 1 0 minimal synovial hyperplasia
HOM F #2 Bone marrow [MA:0000134]
HOM F #2 Trachea [MA:0000441]
HOM M #3 Liver [MA:0000358]
HOM M #3 Spinal cord [MA:0000216]
HOM F #2 Kidney [MA:0000368]
HOM M #1 Skin [MA:0000151]
HOM M #3 Tooth [MA:0000348]
HOM M #1 Femur [MA:0001359]
HOM M #1 Small intestine [MA:0000337]
HOM M #3 Skin [MA:0000151]
HOM M #3 Brown adipose tissue [MA:0000057]
HOM M #3 Stomach [MA:0000353]
HOM F #4 Kidney [MA:0000368]
HOM F #4 Lymph node [MA:0000139]
HOM M #3 Epididymis [MA:0000397]
HOM F #2 Thyroid
HOM M #1 Tibia [MA:0001361]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #4 Femur [MA:0001359]
HOM M #1 Salivary gland [MA:0000346]
HOM M #1 Bone marrow [MA:0000134]
HOM M #3 Tibia [MA:0001361]
HOM M #3 Eye [MA:0000261]
HOM F #4 Skin [MA:0000151]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #2 Tooth [MA:0000348]
HOM F #2 Tibia [MA:0001361]
HOM M #1 Tooth [MA:0000348]
HOM M #1 Gall bladder [MA:0000356] 1 0 Mild neutrophilic and lymphocytic cholecystitis
HOM F #4 Lung [MA:0000415]
HOM F #4 Salivary gland [MA:0000346]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #4 Large intestine [MA:0000333]
HOM M #1 Sciatic nerve [MA:0001172]
HOM F #4 Urinary bladder [MA:0000380]
HOM M #1 Stomach [MA:0000353]
HOM F #2 Eye [MA:0000261] 1 0 Minimal anterior superficial cortical cataract
HOM M #3 Nasal cavity [MA:0000284]
HOM F #4 Skeletal muscle [MA:0003148]
HOM F #4 Pancreas [MA:0000120]
HOM M #1 Epididymis [MA:0000397]
HOM F #4 Spleen [MA:0000141]
HOM M #3 Heart [MA:0000072]
HOM F #4 Brain [MA:0000168] 1 0
HOM M #3 Adrenal gland [MA:0000116]
HOM F #4 Liver [MA:0000358]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM F #4 Small intestine [MA:0000337]
HOM F #4 Uterus [MA:0000389]
HOM F #4 Mammary gland [MA:0000145]
HOM F #2 Heart [MA:0000072]
HOM F #2 Stomach [MA:0000353]
HOM M #3 Bone marrow [MA:0000134]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Spleen [MA:0000141]
HOM M #3 Kidney [MA:0000368]
HOM F #4 Spinal cord [MA:0000216]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #4 Heart [MA:0000072]
HOM F #4 Stomach [MA:0000353]
HOM F #2 Spinal cord [MA:0000216]
HOM F #4 Nasal cavity [MA:0000284]
HOM M #1 Nasal cavity [MA:0000284] 1 0 Minimal anterior superficial cortical cataract
HOM M #1 Eye [MA:0000261]
HOM M #1 Testis [MA:0000411]
HOM M #1 Heart [MA:0000072]
HOM M #3 Prostate gland [MA:0000404]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #2 Salivary gland [MA:0000346]
HOM M #3 Testis [MA:0000411]
HOM M #3 Knee joint [MA:0000471] 1 0 Minimal synovial hyperplasia with effusion
HOM M #3 Sciatic nerve [MA:0001172]
HOM F #4 Tongue [MA:0000347]
HOM M #3 Thymus [MA:0000142]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #3 Lymph node [MA:0000139]
HOM F #4 Sciatic nerve [MA:0001172]
HOM M #3 Tongue [MA:0000347]
HOM M #1 Adrenal gland [MA:0000116]
HOM M #3 Lung [MA:0000415]
HOM M #1 Large intestine [MA:0000333]
HOM M #1 Liver [MA:0000358]
HOM F #4 Tooth [MA:0000348]
HOM M #1 Pancreas [MA:0000120]
HOM M #1 Spleen [MA:0000141]
HOM F #2 Small intestine [MA:0000337]
HOM F #2 Skin [MA:0000151]
HOM F #4 Thyroid
HOM F #4 Brown adipose tissue [MA:0000057]
HOM M #1 Urinary bladder [MA:0000380]
HOM M #3 Large intestine [MA:0000333]
HOM M #1 Esophagus [MA:0000352]
HOM F #2 Uterus [MA:0000389]
HOM M #3 Brain [MA:0000168] 1
HOM F #2 Large intestine [MA:0000333]
HOM F #2 Lung [MA:0000415]
HOM F #2 Tongue [MA:0000347]
HOM M #1 Skeletal muscle [MA:0003148]
HOM M #3 Small intestine [MA:0000337]
HOM F #4 Bone marrow [MA:0000134]
HOM F #2 Femur [MA:0001359]
HOM M #1 Knee joint [MA:0000471]
HOM F #2 Liver [MA:0000358]
HOM F #2 Pancreas [MA:0000120]
HOM F #4 Esophagus [MA:0000352]
HOM F #2 Mammary gland [MA:0000145]
HOM M #1 Thyroid
HOM M #1 Lung [MA:0000415]
HOM F #4 Eye [MA:0000261]
HOM F #2 Spleen [MA:0000141]
HOM F #2 Thymus [MA:0000142]
HOM M #1 Trachea [MA:0000441]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #1 Tongue [MA:0000347]
HOM M #1 Seminal vesicle [MA:0000410]
HOM M #1 Prostate gland [MA:0000404]
HOM M #1 Spinal cord [MA:0000216]
HOM F #2 Brain [MA:0000168] 1 0
HOM M #1 Kidney [MA:0000368]
HOM M #1 Lymph node [MA:0000139]
HOM M #3 Femur [MA:0001359]

Associated histopathology images

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