Histopathology data for Nthl1

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #4 Kidney [MA:0000368]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #4 Sternum [MA:0001331]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Tibia [MA:0001361]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #1 Mammary gland [MA:0000145]
HOM M #4 Epididymis [MA:0000397]
HOM M #3 Brown adipose tissue [MA:0000057] 1 0 Adipose tissue: Focal, mild, lymphoplasmacytic, histiocytic steatitis
HOM F #2 Salivary gland [MA:0000346] 2 0 Salivary gland, submandibular: Moderate, regionally extensive lymphoplasmacytic, neutrophilic, mastocytic sialoadenitis with mild dissecting fibrosis
HOM M #4 Large intestine [MA:0000333]
HOM F #2 Knee joint [MA:0000471]
HOM M #3 Small intestine [MA:0000337]
HOM M #4 Adrenal gland [MA:0000116]
HOM F #2 Tooth [MA:0000348]
HOM F #1 Small intestine [MA:0000337]
HOM M #4 Stomach [MA:0000353]
HOM M #4 Prostate gland [MA:0000404]
HOM M #4 Femur [MA:0001359]
HOM F #2 Gall bladder [MA:0000356]
HOM F #2 Thymus [MA:0000142]
HOM F #2 Thyroid
HOM F #2 Mammary gland [MA:0000145]
HOM F #2 Bone [MA:0001459]
HOM F #1 Liver [MA:0000358]
HOM M #3 Kidney [MA:0000368]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Seminal vesicle [MA:0000410]
HOM F #2 Pancreas [MA:0000120]
HOM F #2 Eye [MA:0000261]
HOM M #3 Liver [MA:0000358]
HOM M #3 Tibia [MA:0001361]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM F #1 Tooth [MA:0000348]
HOM F #1 Knee joint [MA:0000471]
HOM F #1 Kidney [MA:0000368]
HOM F #2 Bone marrow [MA:0000134]
HOM M #3 Testis [MA:0000411]
HOM M #3 Large intestine [MA:0000333]
HOM F #2 Esophagus [MA:0000352]
HOM M #4 Skin [MA:0000151]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #1 Spleen [MA:0000141]
HOM M #4 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, follicular lymphoid hyperplasia
HOM M #4 Small intestine [MA:0000337]
HOM M #3 Salivary gland [MA:0000346]
HOM M #3 Adrenal gland [MA:0000116]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Small intestine [MA:0000337]
HOM M #4 Brain [MA:0000168]
HOM M #4 Gall bladder [MA:0000356]
HOM M #4 Thyroid
HOM M #3 Brain [MA:0000168]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Thyroid
HOM F #2 Brain [MA:0000168]
HOM F #1 Gall bladder [MA:0000356]
HOM F #2 Tibia [MA:0001361]
HOM M #3 Prostate gland [MA:0000404]
HOM M #4 Tongue [MA:0000347]
HOM F #2 Lymph node [MA:0000139]
HOM M #3 Seminal vesicle [MA:0000410]
HOM M #4 Tibia [MA:0001361]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #1 Sternum [MA:0001331]
HOM M #4 Spleen [MA:0000141]
HOM F #1 Skin [MA:0000151]
HOM F #1 Femur [MA:0001359]
HOM M #3 Esophagus [MA:0000352]
HOM F #2 Tongue [MA:0000347]
HOM M #3 Bone [MA:0001459]
HOM F #1 Pancreas [MA:0000120]
HOM F #1 Eye [MA:0000261]
HOM F #2 Spleen [MA:0000141]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #3 Eye [MA:0000261] 1 0 Eye: Focal retinal dysplasia
HOM F #1 Skeletal muscle [MA:0003148]
HOM F #2 Sternum [MA:0001331]
HOM F #2 Kidney [MA:0000368]
HOM F #1 Esophagus [MA:0000352]
HOM M #3 Bone marrow [MA:0000134]
HOM M #4 Tooth [MA:0000348]
HOM M #4 Knee joint [MA:0000471]
HOM M #3 Lymph node [MA:0000139]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Uterus [MA:0000389]
HOM M #3 Sciatic nerve [MA:0001172]
HOM M #4 Salivary gland [MA:0000346]
HOM F #1 Brain [MA:0000168]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #1 Ear [MA:0000236]
HOM M #3 Thyroid
HOM F #2 Large intestine [MA:0000333]
HOM M #3 Gall bladder [MA:0000356]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #3 Ear [MA:0000236]
HOM M #3 Tongue [MA:0000347]
HOM M #3 Heart [MA:0000072]
HOM F #1 Lymph node [MA:0000139] 1 0 Lymph node, mesenteric: Mild, follicular lymphoid hyperplasia
HOM F #2 Ear [MA:0000236]
HOM F #2 Uterus [MA:0000389] 1 0 Uterus: Mild, stromal edema
HOM F #1 Lung [MA:0000415]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #1 Trachea [MA:0000441]
HOM M #4 Pancreas [MA:0000120]
HOM F #1 Stomach [MA:0000353]
HOM M #4 Eye [MA:0000261]
HOM F #1 Heart [MA:0000072]
HOM F #2 Spinal cord [MA:0000216]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #2 Ovary [MA:0000384]
HOM M #4 Testis [MA:0000411]
HOM F #2 Femur [MA:0001359]
HOM M #4 Bone [MA:0001459]
HOM F #1 Tongue [MA:0000347]
HOM M #4 Thymus [MA:0000142]
HOM F #2 Skin [MA:0000151]
HOM F #1 Adrenal gland [MA:0000116]
HOM M #4 Bone marrow [MA:0000134]
HOM M #4 Esophagus [MA:0000352]
HOM M #3 Spleen [MA:0000141]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #3 Sternum [MA:0001331]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #1 Bone [MA:0001459]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Large intestine [MA:0000333]
HOM M #3 Stomach [MA:0000353]
HOM M #3 Lung [MA:0000415]
HOM M #3 Knee joint [MA:0000471]
HOM F #1 Salivary gland [MA:0000346]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Lung [MA:0000415]
HOM F #2 Lung [MA:0000415]
HOM M #3 Skin [MA:0000151]
HOM F #2 Heart [MA:0000072]
HOM M #4 Ear [MA:0000236]
HOM F #2 Liver [MA:0000358]
HOM F #2 Trachea [MA:0000441]
HOM F #2 Stomach [MA:0000353]
HOM M #3 Tooth [MA:0000348]
HOM M #3 Pancreas [MA:0000120]
HOM M #4 Liver [MA:0000358]
HOM F #2 Nasal cavity [MA:0000284]
HOM M #3 Epididymis [MA:0000397]
HOM M #4 Heart [MA:0000072]
HOM M #3 Femur [MA:0001359]
HOM M #3 Thymus [MA:0000142]
HOM F #1 Ovary [MA:0000384]
HOM M #3 Spinal cord [MA:0000216]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #1 Bone marrow [MA:0000134]

Associated histopathology images

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