Histopathology data for Npas2

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #3 Salivary gland [MA:0000346]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #4 Skin [MA:0000151]
HOM F #1 Tongue [MA:0000347]
HOM M #2 Liver [MA:0000358]
HOM F #3 Tooth [MA:0000348]
HOM M #4 Ear [MA:0000236]
HOM M #2 Salivary gland [MA:0000346]
HOM M #2 Tooth [MA:0000348]
HOM F #1 Lung [MA:0000415]
HOM M #4 Heart [MA:0000072]
HOM M #4 Brain [MA:0000168]
HOM M #2 Urinary bladder [MA:0000380]
HOM M #4 Esophagus [MA:0000352]
HOM M #4 Prostate gland [MA:0000404]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #3 Urinary bladder [MA:0000380]
HOM F #3 Liver [MA:0000358]
HOM M #2 Skin [MA:0000151]
HOM F #3 Pancreas [MA:0000120]
HOM F #1 Large intestine [MA:0000333]
HOM F #3 Brain [MA:0000168]
HOM M #2 Pancreas [MA:0000120]
HOM F #3 Skin [MA:0000151]
HOM M #2 Brain [MA:0000168]
HOM M #2 Heart [MA:0000072]
HOM F #3 Small intestine [MA:0000337]
HOM M #2 Small intestine [MA:0000337]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM M #4 Sciatic nerve [MA:0001172]
HOM F #1 Gall bladder [MA:0000356]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM F #3 Uterus [MA:0000389]
HOM M #4 Large intestine [MA:0000333]
HOM M #4 Sternum [MA:0001331]
HOM M #4 Gall bladder [MA:0000356]
HOM M #4 Bone marrow [MA:0000134]
HOM M #2 Tibia [MA:0001361]
HOM M #2 Esophagus [MA:0000352]
HOM M #2 Femur [MA:0001359]
HOM F #3 Femur [MA:0001359]
HOM F #3 Esophagus [MA:0000352]
HOM F #3 Tibia [MA:0001361]
HOM F #3 Heart [MA:0000072]
HOM F #1 Eye [MA:0000261]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #3 Nasal cavity [MA:0000284]
HOM F #1 Trachea [MA:0000441]
HOM M #4 Epididymis [MA:0000397]
HOM F #3 Ear [MA:0000236]
HOM F #3 Bone [MA:0001459]
HOM F #3 Thymus [MA:0000142]
HOM F #1 Sternum [MA:0001331]
HOM M #4 Knee joint [MA:0000471]
HOM F #1 Heart [MA:0000072]
HOM F #1 Esophagus [MA:0000352]
HOM F #3 Mammary gland [MA:0000145]
HOM F #3 Ovary [MA:0000384]
HOM F #1 Knee joint [MA:0000471]
HOM M #2 Eye [MA:0000261]
HOM F #1 Lymph node [MA:0000139]
HOM M #4 Tooth [MA:0000348]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Kidney [MA:0000368]
HOM F #3 Skeletal muscle [MA:0003148]
HOM F #3 Tongue [MA:0000347]
HOM F #3 Lung [MA:0000415]
HOM M #2 Stomach [MA:0000353]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #3 Lymph node [MA:0000139]
HOM M #4 Stomach [MA:0000353]
HOM M #4 Trachea [MA:0000441]
HOM F #1 Adrenal gland [MA:0000116]
HOM M #2 Epididymis [MA:0000397]
HOM F #1 Thyroid
HOM F #1 Bone [MA:0001459]
HOM M #4 Lung [MA:0000415]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #2 Bone marrow [MA:0000134]
HOM F #3 Kidney [MA:0000368]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #3 Trachea [MA:0000441]
HOM F #3 Spinal cord [MA:0000216]
HOM F #3 Knee joint [MA:0000471]
HOM F #3 Adrenal gland [MA:0000116]
HOM F #1 Uterus [MA:0000389]
HOM M #4 Liver [MA:0000358]
HOM M #4 Tibia [MA:0001361]
HOM M #2 Spleen [MA:0000141]
HOM M #2 Kidney [MA:0000368]
HOM M #4 Thymus [MA:0000142]
HOM F #3 Spleen [MA:0000141]
HOM F #1 Small intestine [MA:0000337]
HOM F #1 Brain [MA:0000168]
HOM M #4 Small intestine [MA:0000337]
HOM M #2 Thyroid
HOM F #3 Thyroid
HOM F #1 Mammary gland [MA:0000145]
HOM M #2 Testis [MA:0000411]
HOM M #2 Gall bladder [MA:0000356]
HOM F #1 Tibia [MA:0001361]
HOM F #1 Tooth [MA:0000348]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Liver [MA:0000358]
HOM M #4 Spinal cord [MA:0000216]
HOM F #1 Pancreas [MA:0000120]
HOM F #1 Skin [MA:0000151]
HOM M #4 Femur [MA:0001359]
HOM F #3 Sternum [MA:0001331]
HOM M #4 Pancreas [MA:0000120]
HOM M #2 Sternum [MA:0001331]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #2 Large intestine [MA:0000333]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #2 Ear [MA:0000236]
HOM F #3 Large intestine [MA:0000333]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Ovary [MA:0000384]
HOM M #2 Adrenal gland [MA:0000116]
HOM M #2 Nasal cavity [MA:0000284]
HOM M #4 Bone [MA:0001459]
HOM M #4 Salivary gland [MA:0000346]
HOM M #2 Bone [MA:0001459]
HOM F #1 Bone marrow [MA:0000134]
HOM M #4 Seminal vesicle [MA:0000410]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #4 Kidney [MA:0000368]
HOM F #3 Eye [MA:0000261]
HOM F #1 Spleen [MA:0000141]
HOM F #1 Stomach [MA:0000353]
HOM M #2 Thymus [MA:0000142]
HOM M #4 Spleen [MA:0000141]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #4 Testis [MA:0000411]
HOM F #1 Ear [MA:0000236]
HOM M #2 Lymph node [MA:0000139]
HOM M #2 Skeletal muscle [MA:0003148]
HOM M #2 Lung [MA:0000415]
HOM F #1 Femur [MA:0001359]
HOM F #3 Sciatic nerve [MA:0001172]
HOM F #1 Salivary gland [MA:0000346]
HOM F #3 Bone marrow [MA:0000134]
HOM M #2 Prostate gland [MA:0000404]
HOM M #2 Spinal cord [MA:0000216]
HOM M #4 Tongue [MA:0000347]
HOM M #2 Trachea [MA:0000441]
HOM M #2 Knee joint [MA:0000471]
HOM F #3 Stomach [MA:0000353]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #2 Tongue [MA:0000347]
HOM M #4 Lymph node [MA:0000139]
HOM M #2 Seminal vesicle [MA:0000410]

Associated histopathology images

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