Histopathology data for Metrn

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #2 Eye [MA:0000261]
HOM F #2 Sciatic nerve [MA:0001172]
HOM F #3 Sciatic nerve [MA:0001172]
HOM M #4 Femur [MA:0001359]
HOM F #3 Eye [MA:0000261]
HOM M #1 Eye [MA:0000261]
HOM M #1 Nasal cavity [MA:0000284]
HOM F #2 Nasal cavity [MA:0000284]
HOM F #3 Nasal cavity [MA:0000284]
HOM F #3 Lymph node [MA:0000139]
HOM M #1 Bone marrow [MA:0000134]
HOM M #1 Lymph node [MA:0000139]
HOM F #2 Lymph node [MA:0000139]
HOM M #1 Sciatic nerve [MA:0001172]
HOM F #2 Gall bladder [MA:0000356]
HOM M #1 Skeletal muscle [MA:0003148]
HOM M #1 Trachea [MA:0000441]
HOM M #4 Epididymis [MA:0000397]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #1 Thyroid
HOM F #3 Trachea [MA:0000441]
HOM F #2 Trachea [MA:0000441]
HOM M #4 Spinal cord [MA:0000216]
HOM F #3 Gall bladder [MA:0000356]
HOM M #4 Kidney [MA:0000368]
HOM F #3 Thyroid
HOM F #2 Thyroid
HOM F #3 Brain [MA:0000168]
HOM M #1 Tongue [MA:0000347]
HOM M #1 Heart [MA:0000072]
HOM F #2 Salivary gland [MA:0000346]
HOM F #2 Uterus [MA:0000389]
HOM F #3 Uterus [MA:0000389]
HOM F #3 Salivary gland [MA:0000346]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #3 Skin [MA:0000151]
HOM M #1 Lung [MA:0000415]
HOM F #2 Skeletal muscle [MA:0003148]
HOM F #3 Skeletal muscle [MA:0003148]
HOM F #2 Skin [MA:0000151]
HOM F #3 Tooth [MA:0000348]
HOM F #2 Tooth [MA:0000348]
HOM F #2 Esophagus [MA:0000352]
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Stomach [MA:0000353]
HOM F #3 Bone marrow [MA:0000134]
HOM F #3 Bone [MA:0001459]
HOM F #2 Bone [MA:0001459]
HOM M #4 Small intestine [MA:0000337]
HOM F #3 Esophagus [MA:0000352]
HOM M #4 Lung [MA:0000415]
HOM M #4 Prostate gland [MA:0000404]
HOM M #1 Spleen [MA:0000141]
HOM F #2 Stomach [MA:0000353]
HOM M #1 Sternum [MA:0001331]
HOM F #3 Spleen [MA:0000141]
HOM F #2 Large intestine [MA:0000333]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM M #1 Trigeminal V ganglion [MA:0001080]
HOM M #1 Tooth [MA:0000348]
HOM F #2 Lung [MA:0000415]
HOM M #4 Liver [MA:0000358]
HOM M #1 Stomach [MA:0000353]
HOM F #2 Knee joint [MA:0000471]
HOM F #3 Adrenal gland [MA:0000116]
HOM M #1 Knee joint [MA:0000471]
HOM F #2 Ear [MA:0000236]
HOM M #4 Heart [MA:0000072]
HOM M #4 Esophagus [MA:0000352]
HOM M #4 Bone marrow [MA:0000134]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #1 Skin [MA:0000151]
HOM F #3 Tongue [MA:0000347]
HOM F #3 Kidney [MA:0000368]
HOM M #1 Femur [MA:0001359]
HOM M #1 Pancreas [MA:0000120]
HOM M #1 Epididymis [MA:0000397]
HOM M #4 Ear [MA:0000236]
HOM M #1 Thymus [MA:0000142]
HOM M #1 Spinal cord [MA:0000216]
HOM F #2 Heart [MA:0000072]
HOM M #4 Large intestine [MA:0000333]
HOM F #2 Liver [MA:0000358]
HOM F #3 Tibia [MA:0001361]
HOM M #4 Thyroid
HOM M #4 Gall bladder [MA:0000356]
HOM M #1 Brown adipose tissue [MA:0000057]
HOM M #4 Lymph node [MA:0000139]
HOM M #4 Bone [MA:0001459]
HOM M #1 Small intestine [MA:0000337]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #4 Eye [MA:0000261]
HOM F #3 Small intestine [MA:0000337]
HOM F #2 Mammary gland [MA:0000145]
HOM F #2 Thymus [MA:0000142]
HOM F #2 Small intestine [MA:0000337]
HOM F #3 Ovary [MA:0000384]
HOM F #2 Ovary [MA:0000384]
HOM F #2 Urinary bladder [MA:0000380]
HOM M #4 Tooth [MA:0000348]
HOM F #3 Urinary bladder [MA:0000380]
HOM F #2 Brown adipose tissue [MA:0000057]
HOM M #4 Testis [MA:0000411]
HOM F #3 Pancreas [MA:0000120]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #4 Nasal cavity [MA:0000284]
HOM M #1 Kidney [MA:0000368]
HOM M #4 Salivary gland [MA:0000346]
HOM F #2 Pancreas [MA:0000120]
HOM M #4 Trachea [MA:0000441]
HOM F #3 Femur [MA:0001359]
HOM F #2 Femur [MA:0001359]
HOM M #4 Knee joint [MA:0000471]
HOM F #3 Thymus [MA:0000142]
HOM F #2 Sternum [MA:0001331]
HOM F #3 Sternum [MA:0001331]
HOM F #2 Spinal cord [MA:0000216]
HOM F #3 Spinal cord [MA:0000216]
HOM F #3 Mammary gland [MA:0000145]
HOM M #4 Brain [MA:0000168]
HOM M #1 Liver [MA:0000358]
HOM M #1 Tibia [MA:0001361]
HOM F #3 Large intestine [MA:0000333]
HOM M #1 Testis [MA:0000411]
HOM M #4 Pancreas [MA:0000120]
HOM M #1 Large intestine [MA:0000333]
HOM M #4 Tongue [MA:0000347]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM F #2 Spleen [MA:0000141]
HOM M #4 Tibia [MA:0001361]
HOM M #1 Urinary bladder [MA:0000380]
HOM M #4 Thymus [MA:0000142]
HOM F #3 Lung [MA:0000415]
HOM M #4 Skin [MA:0000151]
HOM M #1 Adrenal gland [MA:0000116]
HOM F #3 Knee joint [MA:0000471]
HOM M #1 Salivary gland [MA:0000346]
HOM F #3 Stomach [MA:0000353]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #2 Brain [MA:0000168]
HOM M #4 Sternum [MA:0001331]
HOM M #1 Brain [MA:0000168]
HOM F #3 Heart [MA:0000072]
HOM F #3 Ear [MA:0000236]
HOM M #4 Spleen [MA:0000141]
HOM F #2 Tongue [MA:0000347]
HOM M #1 Prostate gland [MA:0000404]
HOM M #4 Skeletal muscle [MA:0003148]
HOM M #1 Seminal vesicle [MA:0000410]
HOM F #2 Kidney [MA:0000368]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM M #1 Esophagus [MA:0000352]
HOM M #1 Bone [MA:0001459]
HOM F #3 Liver [MA:0000358]
HOM F #2 Tibia [MA:0001361]

Associated histopathology images

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