Histopathology data for Gpatch3

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #3 Nasal cavity [MA:0000284]
HOM F #3 Sciatic nerve [MA:0001172]
HOM M #4 Epididymis [MA:0000397]
HOM M #4 Adrenal gland [MA:0000116]
HOM F #3 Lymph node [MA:0000139]
HOM F #1 Bone marrow [MA:0000134]
HOM F #3 Trachea [MA:0000441]
HOM M #4 Urinary bladder [MA:0000380]
HOM F #1 Esophagus [MA:0000352]
HOM M #2 Pancreas [MA:0000120]
HOM F #1 Heart [MA:0000072]
HOM F #1 Brain [MA:0000168]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM F #1 Ear [MA:0000236]
HOM M #4 Kidney [MA:0000368]
HOM F #1 Uterus [MA:0000389]
HOM F #3 Thyroid
HOM M #4 Femur [MA:0001359]
HOM F #3 Gall bladder [MA:0000356]
HOM M #4 Sternum [MA:0001331]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #4 Spinal cord [MA:0000216]
HOM F #3 Heart [MA:0000072]
HOM F #3 Brain [MA:0000168]
HOM M #4 Stomach [MA:0000353]
HOM F #1 Thyroid
HOM F #1 Gall bladder [MA:0000356]
HOM F #3 Lung [MA:0000415]
HOM M #4 Lung [MA:0000415]
HOM M #4 Prostate gland [MA:0000404]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #1 Eye [MA:0000261]
HOM M #2 Liver [MA:0000358]
HOM F #1 Skin [MA:0000151]
HOM M #2 Tibia [MA:0001361]
HOM F #3 Tongue [MA:0000347]
HOM M #4 Small intestine [MA:0000337]
HOM M #4 Brain [MA:0000168]
HOM F #1 Skeletal muscle [MA:0003148]
HOM F #1 Urinary bladder [MA:0000380]
HOM F #1 Adrenal gland [MA:0000116]
HOM M #2 Spinal cord [MA:0000216]
HOM F #1 Salivary gland [MA:0000346]
HOM F #1 Ovary [MA:0000384]
HOM F #1 Bone [MA:0001459]
HOM F #3 Spleen [MA:0000141]
HOM M #2 Femur [MA:0001359]
HOM F #1 Kidney [MA:0000368]
HOM M #2 Eye [MA:0000261]
HOM F #3 Stomach [MA:0000353]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM F #3 Tooth [MA:0000348]
HOM M #4 Bone marrow [MA:0000134]
HOM M #2 Gall bladder [MA:0000356]
HOM M #2 Nasal cavity [MA:0000284]
HOM M #2 Thyroid
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM F #3 Knee joint [MA:0000471]
HOM M #4 Heart [MA:0000072]
HOM F #1 Spleen [MA:0000141]
HOM M #4 Liver [MA:0000358]
HOM M #2 Trachea [MA:0000441]
HOM M #4 Esophagus [MA:0000352]
HOM M #2 Knee joint [MA:0000471]
HOM M #2 Tooth [MA:0000348]
HOM M #4 Large intestine [MA:0000333]
HOM F #3 Mammary gland [MA:0000145]
HOM M #2 Skeletal muscle [MA:0003148]
HOM M #2 Skin [MA:0000151]
HOM F #3 Skeletal muscle [MA:0003148]
HOM F #3 Thymus [MA:0000142]
HOM M #2 Epididymis [MA:0000397]
HOM F #3 Femur [MA:0001359]
HOM M #2 Sternum [MA:0001331]
HOM F #1 Tongue [MA:0000347]
HOM F #3 Spinal cord [MA:0000216]
HOM M #2 Thymus [MA:0000142]
HOM F #3 Sternum [MA:0001331]
HOM M #4 Ear [MA:0000236]
HOM F #3 Skin [MA:0000151]
HOM F #3 Eye [MA:0000261]
HOM F #1 Lymph node [MA:0000139]
HOM F #3 Pancreas [MA:0000120]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #4 Salivary gland [MA:0000346]
HOM F #1 Thymus [MA:0000142]
HOM F #1 Mammary gland [MA:0000145]
HOM F #1 Tibia [MA:0001361]
HOM M #2 Prostate gland [MA:0000404]
HOM F #1 Liver [MA:0000358]
HOM M #2 Tongue [MA:0000347]
HOM F #1 Small intestine [MA:0000337]
HOM M #4 Tooth [MA:0000348]
HOM M #2 Ear [MA:0000236]
HOM M #2 Large intestine [MA:0000333]
HOM M #2 Brain [MA:0000168]
HOM F #3 Small intestine [MA:0000337]
HOM M #4 Bone [MA:0001459]
HOM M #2 Lung [MA:0000415]
HOM M #2 Stomach [MA:0000353]
HOM F #1 Pancreas [MA:0000120]
HOM M #2 Adrenal gland [MA:0000116]
HOM M #4 Testis [MA:0000411]
HOM M #4 Nasal cavity [MA:0000284]
HOM F #1 Femur [MA:0001359]
HOM F #3 Tibia [MA:0001361]
HOM M #2 Kidney [MA:0000368]
HOM F #3 Liver [MA:0000358]
HOM F #3 Adrenal gland [MA:0000116]
HOM M #4 Lymph node [MA:0000139]
HOM F #1 Spinal cord [MA:0000216]
HOM M #2 Spleen [MA:0000141]
HOM F #3 Kidney [MA:0000368]
HOM M #2 Heart [MA:0000072]
HOM M #4 Trachea [MA:0000441]
HOM M #4 Knee joint [MA:0000471]
HOM F #1 Tooth [MA:0000348]
HOM F #3 Large intestine [MA:0000333]
HOM M #4 Tibia [MA:0001361]
HOM M #4 Thymus [MA:0000142]
HOM F #1 Knee joint [MA:0000471]
HOM M #4 Skin [MA:0000151]
HOM M #2 Lymph node [MA:0000139]
HOM M #4 Tongue [MA:0000347]
HOM M #4 Skeletal muscle [MA:0003148]
HOM M #2 Sciatic nerve [MA:0001172]
HOM F #1 Sternum [MA:0001331]
HOM F #1 Large intestine [MA:0000333]
HOM F #3 Urinary bladder [MA:0000380]
HOM M #4 Pancreas [MA:0000120]
HOM F #3 Ear [MA:0000236]
HOM F #3 Salivary gland [MA:0000346]
HOM M #2 Seminal vesicle [MA:0000410]
HOM M #2 Urinary bladder [MA:0000380]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM M #2 Small intestine [MA:0000337]
HOM M #2 Esophagus [MA:0000352]
HOM M #4 Eye [MA:0000261]
HOM F #1 Trachea [MA:0000441]
HOM F #3 Bone [MA:0001459]
HOM M #2 Bone marrow [MA:0000134]
HOM M #4 Spleen [MA:0000141]
HOM M #2 Salivary gland [MA:0000346]
HOM F #3 Uterus [MA:0000389]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #4 Thyroid
HOM M #2 Testis [MA:0000411]
HOM F #3 Esophagus [MA:0000352]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #1 Lung [MA:0000415]
HOM F #1 Stomach [MA:0000353]
HOM M #2 Bone [MA:0001459]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #3 Ovary [MA:0000384]
HOM F #3 Bone marrow [MA:0000134]

Associated histopathology images

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