Histopathology data for Galnt13

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #7 Tibia [MA:0001361]
HOM F #7 Liver [MA:0000358]
HOM F #8 Uterus [MA:0000389]
HOM F #7 Small intestine [MA:0000337]
HOM F #8 Skeletal muscle [MA:0003148]
HOM F #8 Skin [MA:0000151]
HOM M #4 Testis [MA:0000411]
HOM F #7 Thymus [MA:0000142]
HOM F #3 Ear [MA:0000236]
HOM M #2 Pancreas [MA:0000120]
HOM M #4 Tooth [MA:0000348] 2 incisor overgrowth
HOM M #5 Epididymis [MA:0000397]
HOM F #8 Bone marrow [MA:0000134]
HOM F #3 Skin [MA:0000151]
HOM M #2 Testis [MA:0000411]
HOM F #3 Skeletal muscle [MA:0003148]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM M #4 Knee joint [MA:0000471]
HOM F #8 Eye [MA:0000261]
HOM F #1 Salivary gland [MA:0000346] 1 0 Salivary gland (parotid): Mild, multifocal vacuolation
HOM M #5 Sternum [MA:0001331]
HOM M #6 Epididymis [MA:0000397]
HOM F #1 Thymus [MA:0000142]
HOM F #8 Large intestine [MA:0000333]
HOM F #7 Spinal cord [MA:0000216]
HOM M #2 Knee joint [MA:0000471]
HOM F #3 Large intestine [MA:0000333]
HOM M #6 Pancreas [MA:0000120]
HOM F #7 Femur [MA:0001359]
HOM F #1 Brown adipose tissue [MA:0000057]
HOM M #6 Sternum [MA:0001331]
HOM F #8 Thyroid
HOM F #7 Brown adipose tissue [MA:0000057]
HOM F #1 Spinal cord [MA:0000216]
HOM F #1 Trachea [MA:0000441]
HOM F #3 Femur [MA:0001359]
HOM M #5 Lung [MA:0000415]
HOM M #6 Spleen [MA:0000141] 1 0 Spleen: Mild extramedullary hematopoiesis, increased
HOM F #8 Urinary bladder [MA:0000380]
HOM M #5 Heart [MA:0000072]
HOM F #3 Thyroid
HOM M #6 Testis [MA:0000411]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #3 Spinal cord [MA:0000216]
HOM M #5 Stomach [MA:0000353]
HOM F #3 Eye [MA:0000261] 1 0 Eye: Focal, mild retinal dysplasia
HOM M #2 Bone [MA:0001459]
HOM F #8 Bone [MA:0001459]
HOM M #6 Brain [MA:0000168]
HOM M #4 Ear [MA:0000236]
HOM F #3 Tooth [MA:0000348]
HOM F #3 Knee joint [MA:0000471]
HOM F #7 Nasal cavity [MA:0000284]
HOM F #7 Trachea [MA:0000441]
HOM M #2 Bone marrow [MA:0000134]
HOM M #4 Bone [MA:0001459]
HOM M #6 Tongue [MA:0000347]
HOM F #3 Thymus [MA:0000142]
HOM F #8 Adrenal gland [MA:0000116]
HOM F #1 Liver [MA:0000358] 1 0 Liver: Focal, mild hepatitis
HOM M #4 Bone marrow [MA:0000134]
HOM F #8 Small intestine [MA:0000337]
HOM F #1 Heart [MA:0000072]
HOM M #6 Kidney [MA:0000368] 2 0 Kidney: Regional, subcapsular degeneration with fibrosis and lymphocytic inflammation
HOM F #3 Pancreas [MA:0000120]
HOM F #8 Mammary gland [MA:0000145]
HOM M #6 Nasal cavity [MA:0000284]
HOM M #2 Tongue [MA:0000347]
HOM F #7 Brain [MA:0000168]
HOM M #6 Eye [MA:0000261] 1 0 Eye: Focal, mild retinal dysplasia
HOM M #6 Trachea [MA:0000441]
HOM F #7 Ear [MA:0000236]
HOM M #2 Heart [MA:0000072]
HOM M #2 Brain [MA:0000168]
HOM M #5 Gall bladder [MA:0000356] 1 0
HOM F #8 Pancreas [MA:0000120]
HOM F #1 Large intestine [MA:0000333]
HOM F #1 Brain [MA:0000168]
HOM F #1 Ear [MA:0000236]
HOM F #8 Tibia [MA:0001361]
HOM F #8 Liver [MA:0000358]
HOM M #6 Skin [MA:0000151]
HOM M #4 Tongue [MA:0000347]
HOM M #4 Heart [MA:0000072]
HOM M #4 Brain [MA:0000168]
HOM M #6 Salivary gland [MA:0000346]
HOM F #7 Large intestine [MA:0000333]
HOM M #6 Tooth [MA:0000348]
HOM M #2 Kidney [MA:0000368]
HOM F #3 Tibia [MA:0001361]
HOM M #6 Skeletal muscle [MA:0003148]
HOM M #4 Adrenal gland [MA:0000116]
HOM M #5 Salivary gland [MA:0000346]
HOM F #1 Sternum [MA:0001331]
HOM F #7 Sternum [MA:0001331]
HOM F #1 Femur [MA:0001359]
HOM M #5 Testis [MA:0000411]
HOM F #1 Ovary [MA:0000384]
HOM M #4 Kidney [MA:0000368]
HOM M #2 Adrenal gland [MA:0000116]
HOM F #7 Ovary [MA:0000384]
HOM M #5 Tongue [MA:0000347]
HOM M #2 Thyroid
HOM M #6 Stomach [MA:0000353]
HOM F #7 Salivary gland [MA:0000346]
HOM M #2 Gall bladder [MA:0000356]
HOM F #7 Adrenal gland [MA:0000116]
HOM M #5 Brain [MA:0000168]
HOM M #5 Tibia [MA:0001361]
HOM M #2 Epididymis [MA:0000397]
HOM M #2 Femur [MA:0001359]
HOM F #7 Thyroid
HOM M #2 Spinal cord [MA:0000216]
HOM M #6 Lung [MA:0000415]
HOM F #8 Femur [MA:0001359]
HOM M #4 Gall bladder [MA:0000356]
HOM F #1 Gall bladder [MA:0000356]
HOM F #1 Thyroid
HOM M #6 Knee joint [MA:0000471]
HOM M #6 Ear [MA:0000236]
HOM M #5 Pancreas [MA:0000120]
HOM F #8 Spinal cord [MA:0000216]
HOM F #8 Sternum [MA:0001331]
HOM M #6 Large intestine [MA:0000333]
HOM F #1 Small intestine [MA:0000337]
HOM F #3 Brown adipose tissue [MA:0000057]
HOM M #2 Sternum [MA:0001331]
HOM F #3 Adrenal gland [MA:0000116]
HOM F #1 Tibia [MA:0001361]
HOM M #4 Thyroid
HOM F #3 Small intestine [MA:0000337]
HOM M #5 Kidney [MA:0000368]
HOM F #3 Ovary [MA:0000384]
HOM F #3 Salivary gland [MA:0000346]
HOM F #1 Adrenal gland [MA:0000116]
HOM F #1 Tongue [MA:0000347]
HOM F #7 Kidney [MA:0000368]
HOM F #1 Kidney [MA:0000368]
HOM F #7 Tongue [MA:0000347]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Sternum [MA:0001331]
HOM M #4 Pancreas [MA:0000120]
HOM M #4 Epididymis [MA:0000397]
HOM M #4 Femur [MA:0001359]
HOM M #2 Liver [MA:0000358]
HOM F #8 Tongue [MA:0000347]
HOM F #7 Mammary gland [MA:0000145]
HOM F #3 Heart [MA:0000072]
HOM M #5 Spinal cord [MA:0000216]
HOM F #8 Esophagus [MA:0000352]
HOM F #3 Brain [MA:0000168]
HOM M #5 Adrenal gland [MA:0000116]
HOM M #2 Thymus [MA:0000142]
HOM M #2 Tibia [MA:0001361]
HOM F #3 Tongue [MA:0000347]
HOM F #3 Stomach [MA:0000353]
HOM M #5 Femur [MA:0001359]
HOM F #1 Knee joint [MA:0000471]
HOM M #6 Small intestine [MA:0000337]
HOM F #8 Heart [MA:0000072]
HOM F #3 Lung [MA:0000415]
HOM M #4 Salivary gland [MA:0000346]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM M #6 Thymus [MA:0000142]
HOM F #8 Sciatic nerve [MA:0001172]
HOM F #1 Mammary gland [MA:0000145]
HOM M #4 Liver [MA:0000358]
HOM F #1 Tooth [MA:0000348]
HOM M #4 Tibia [MA:0001361]
HOM F #1 Bone [MA:0001459]
HOM M #6 Urinary bladder [MA:0000380]
HOM F #8 Spleen [MA:0000141]
HOM M #5 Seminal vesicle [MA:0000410]
HOM F #3 Kidney [MA:0000368]
HOM M #5 Small intestine [MA:0000337]
HOM M #2 Small intestine [MA:0000337]
HOM F #8 Gall bladder [MA:0000356]
HOM M #6 Brown adipose tissue [MA:0000057]
HOM M #6 Femur [MA:0001359]
HOM F #7 Pancreas [MA:0000120]
HOM M #6 Seminal vesicle [MA:0000410] 2 0 Seminal vesicle, unilateral: Moderate, regionally extensive granulomatous inflammation with abundant luminal spermatozoa and cholesterol clefts
HOM F #1 Pancreas [MA:0000120]
HOM M #5 Urinary bladder [MA:0000380]
HOM M #6 Spinal cord [MA:0000216]
HOM F #3 Spleen [MA:0000141]
HOM M #5 Prostate gland [MA:0000404]
HOM M #4 Sciatic nerve [MA:0001172]
HOM F #3 Gall bladder [MA:0000356]
HOM M #5 Ear [MA:0000236]
HOM F #8 Ovary [MA:0000384]
HOM F #3 Trachea [MA:0000441]
HOM F #8 Salivary gland [MA:0000346]
HOM M #5 Liver [MA:0000358]
HOM M #4 Lymph node [MA:0000139]
HOM M #2 Salivary gland [MA:0000346]
HOM F #8 Kidney [MA:0000368]
HOM M #6 Prostate gland [MA:0000404]
HOM F #3 Nasal cavity [MA:0000284]
HOM M #2 Seminal vesicle [MA:0000410] 2 0 Seminal vesicle: Bilateral dilation with epithelial attenuation
HOM M #2 Urinary bladder [MA:0000380]
HOM M #5 Brown adipose tissue [MA:0000057]
HOM M #6 Trigeminal V ganglion [MA:0001080]
HOM F #7 Knee joint [MA:0000471]
HOM F #7 Tooth [MA:0000348]
HOM M #4 Small intestine [MA:0000337]
HOM M #6 Tibia [MA:0001361]
HOM F #7 Stomach [MA:0000353]
HOM M #2 Sciatic nerve [MA:0001172]
HOM M #5 Large intestine [MA:0000333]
HOM M #2 Esophagus [MA:0000352]
HOM M #6 Adrenal gland [MA:0000116]
HOM F #8 Lymph node [MA:0000139]
HOM M #2 Large intestine [MA:0000333]
HOM F #3 Sternum [MA:0001331]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #4 Esophagus [MA:0000352]
HOM F #3 Mammary gland [MA:0000145]
HOM M #4 Brown adipose tissue [MA:0000057]
HOM M #2 Brown adipose tissue [MA:0000057]
HOM F #7 Lung [MA:0000415]
HOM F #8 Brain [MA:0000168]
HOM F #1 Stomach [MA:0000353]
HOM F #7 Uterus [MA:0000389]
HOM M #4 Spleen [MA:0000141]
HOM F #8 Thymus [MA:0000142]
HOM F #7 Heart [MA:0000072]
HOM M #6 Sciatic nerve [MA:0001172]
HOM M #2 Prostate gland [MA:0000404]
HOM F #1 Spleen [MA:0000141] 1 0 Spleen: Mild extramedullary hematopoiesis, increased
HOM F #8 Brown adipose tissue [MA:0000057]
HOM M #2 Ear [MA:0000236]
HOM M #6 Lymph node [MA:0000139]
HOM M #4 Stomach [MA:0000353]
HOM F #1 Lung [MA:0000415]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #5 Trachea [MA:0000441]
HOM M #6 Gall bladder [MA:0000356]
HOM M #6 Thyroid
HOM M #5 Lymph node [MA:0000139]
HOM M #5 Nasal cavity [MA:0000284]
HOM M #4 Prostate gland [MA:0000404]
HOM M #5 Sciatic nerve [MA:0001172]
HOM M #5 Eye [MA:0000261]
HOM M #4 Large intestine [MA:0000333]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #6 Bone [MA:0001459]
HOM F #7 Eye [MA:0000261]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #5 Bone marrow [MA:0000134]
HOM F #8 Trigeminal V ganglion [MA:0001080]
HOM F #1 Skin [MA:0000151]
HOM M #5 Esophagus [MA:0000352]
HOM M #4 Lung [MA:0000415]
HOM F #1 Uterus [MA:0000389]
HOM M #5 Bone [MA:0001459]
HOM M #6 Bone marrow [MA:0000134]
HOM F #3 Liver [MA:0000358]
HOM F #3 Trigeminal V ganglion [MA:0001080]
HOM M #2 Lymph node [MA:0000139]
HOM F #7 Esophagus [MA:0000352]
HOM F #7 Bone marrow [MA:0000134]
HOM M #2 Trachea [MA:0000441]
HOM M #5 Knee joint [MA:0000471]
HOM M #2 Nasal cavity [MA:0000284]
HOM F #7 Skeletal muscle [MA:0003148]
HOM F #1 Sciatic nerve [MA:0001172]
HOM F #1 Eye [MA:0000261]
HOM F #1 Esophagus [MA:0000352]
HOM F #7 Skin [MA:0000151]
HOM F #1 Bone marrow [MA:0000134]
HOM M #5 Tooth [MA:0000348]
HOM M #2 Stomach [MA:0000353]
HOM M #2 Lung [MA:0000415]
HOM F #7 Sciatic nerve [MA:0001172]
HOM M #6 Esophagus [MA:0000352]
HOM F #1 Lymph node [MA:0000139]
HOM M #4 Nasal cavity [MA:0000284] 2 0 Nasal cavity and septum asymmetry
HOM M #5 Thymus [MA:0000142]
HOM F #8 Tooth [MA:0000348]
HOM F #7 Bone [MA:0001459]
HOM M #5 Skin [MA:0000151]
HOM M #5 Skeletal muscle [MA:0003148]
HOM M #4 Trachea [MA:0000441]
HOM M #2 Tooth [MA:0000348]
HOM F #3 Sciatic nerve [MA:0001172]
HOM F #3 Lymph node [MA:0000139]
HOM F #7 Trigeminal V ganglion [MA:0001080]
HOM F #7 Spleen [MA:0000141]
HOM F #7 Urinary bladder [MA:0000380]
HOM F #8 Nasal cavity [MA:0000284]
HOM M #2 Spleen [MA:0000141]
HOM F #7 Lymph node [MA:0000139]
HOM M #5 Trigeminal V ganglion [MA:0001080]
HOM F #3 Urinary bladder [MA:0000380]
HOM M #5 Spleen [MA:0000141]
HOM F #3 Bone marrow [MA:0000134]
HOM F #8 Stomach [MA:0000353]
HOM M #4 Thymus [MA:0000142]
HOM M #2 Eye [MA:0000261]
HOM F #3 Bone [MA:0001459]
HOM F #3 Esophagus [MA:0000352]
HOM M #2 Trigeminal V ganglion [MA:0001080]
HOM F #8 Lung [MA:0000415]
HOM M #2 Skeletal muscle [MA:0003148]
HOM F #3 Uterus [MA:0000389] 2 0 Uterus: Moderate, bilateral cystic endometrial hyperplasia
HOM M #4 Skeletal muscle [MA:0003148]
HOM M #2 Skin [MA:0000151]
HOM F #8 Knee joint [MA:0000471]
HOM F #8 Trachea [MA:0000441]
HOM M #4 Skin [MA:0000151]
HOM M #6 Liver [MA:0000358]
HOM M #4 Eye [MA:0000261]
HOM M #6 Heart [MA:0000072]

Associated histopathology images

The IMPC Newsletter

Get highlights of the most important data releases, news and events, delivered straight to your email inbox

Subscribe to newsletter