Histopathology data for Cntn5

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #2 Urinary bladder [MA:0000380]
HOM F #2 Kidney [MA:0000368]
HOM F #2 Ovary [MA:0000384]
HOM F #1 Spinal cord [MA:0000216]
HOM F #2 Large intestine [MA:0000333]
HOM M #4 Spinal cord [MA:0000216]
HOM M #4 Thymus [MA:0000142]
HOM M #4 Liver [MA:0000358]
HOM F #1 Tibia [MA:0001361]
HOM M #4 Tibia [MA:0001361]
HOM F #1 Mammary gland [MA:0000145]
HOM F #1 Thymus [MA:0000142]
HOM F #2 Stomach [MA:0000353]
HOM F #2 Adrenal gland [MA:0000116]
HOM F #2 Spinal cord [MA:0000216]
HOM F #1 Liver [MA:0000358]
HOM M #3 Urinary bladder [MA:0000380]
HOM F #2 Femur [MA:0001359]
HOM M #4 Small intestine [MA:0000337]
HOM F #1 Small intestine [MA:0000337]
HOM M #3 Epididymis [MA:0000397]
HOM F #2 Sternum [MA:0001331]
HOM M #3 Thymus [MA:0000142]
HOM M #3 Seminal vesicle [MA:0000410]
HOM F #2 Uterus [MA:0000389]
HOM M #3 Spinal cord [MA:0000216]
HOM M #3 Femur [MA:0001359]
HOM M #4 Adrenal gland [MA:0000116]
HOM F #1 Adrenal gland [MA:0000116]
HOM M #3 Sternum [MA:0001331]
HOM M #3 Lung [MA:0000415]
HOM M #4 Sternum [MA:0001331]
HOM F #2 Skeletal muscle [MA:0003148]
HOM M #4 Tooth [MA:0000348]
HOM F #1 Large intestine [MA:0000333]
HOM F #2 Skin [MA:0000151]
HOM M #4 Kidney [MA:0000368]
HOM F #2 Small intestine [MA:0000337]
HOM M #4 Epididymis [MA:0000397]
HOM M #4 Knee joint [MA:0000471]
HOM M #4 Trigeminal V ganglion [MA:0001080]
HOM F #2 Brain [MA:0000168]
HOM F #1 Urinary bladder [MA:0000380]
HOM M #3 Stomach [MA:0000353]
HOM F #1 Bone [MA:0001459]
HOM M #4 Spleen [MA:0000141]
HOM M #3 Large intestine [MA:0000333]
HOM M #4 Thyroid
HOM F #1 Ear [MA:0000236]
HOM F #2 Lymph node [MA:0000139]
HOM M #3 Nasal cavity [MA:0000284]
HOM M #4 Femur [MA:0001359]
HOM F #2 Tongue [MA:0000347]
HOM F #1 Ovary [MA:0000384]
HOM M #4 Pancreas [MA:0000120]
HOM F #2 Spleen [MA:0000141]
HOM M #4 Skin [MA:0000151]
HOM M #3 Liver [MA:0000358]
HOM M #4 Skeletal muscle [MA:0003148]
HOM F #2 Tibia [MA:0001361]
HOM M #3 Heart [MA:0000072]
HOM F #2 Tooth [MA:0000348]
HOM M #3 Thyroid
HOM F #2 Knee joint [MA:0000471]
HOM M #4 Esophagus [MA:0000352]
HOM F #1 Esophagus [MA:0000352]
HOM F #1 Eye [MA:0000261]
HOM F #1 Sciatic nerve [MA:0001172]
HOM M #4 Sciatic nerve [MA:0001172]
HOM M #4 Eye [MA:0000261]
HOM M #3 Lymph node [MA:0000139]
HOM F #1 Bone marrow [MA:0000134]
HOM F #2 Salivary gland [MA:0000346]
HOM M #4 Bone marrow [MA:0000134]
HOM F #2 Trigeminal V ganglion [MA:0001080]
HOM M #3 Salivary gland [MA:0000346]
HOM M #3 Trachea [MA:0000441]
HOM M #3 Knee joint [MA:0000471]
HOM F #2 Thyroid
HOM F #2 Gall bladder [MA:0000356]
HOM F #1 Uterus [MA:0000389]
HOM M #3 Bone marrow [MA:0000134]
HOM F #1 Tongue [MA:0000347]
HOM M #4 Lung [MA:0000415]
HOM M #3 Esophagus [MA:0000352]
HOM F #1 Brain [MA:0000168]
HOM F #1 Heart [MA:0000072]
HOM M #4 Prostate gland [MA:0000404]
HOM M #4 Heart [MA:0000072]
HOM M #4 Brain [MA:0000168]
HOM M #3 Tooth [MA:0000348]
HOM M #4 Tongue [MA:0000347]
HOM F #2 Sciatic nerve [MA:0001172]
HOM M #3 Skeletal muscle [MA:0003148]
HOM F #2 Pancreas [MA:0000120]
HOM F #2 Eye [MA:0000261]
HOM F #1 Salivary gland [MA:0000346]
HOM M #3 Testis [MA:0000411]
HOM F #1 Trachea [MA:0000441]
HOM M #4 Lymph node [MA:0000139]
HOM M #3 Eye [MA:0000261]
HOM M #3 Bone [MA:0001459]
HOM F #1 Lymph node [MA:0000139]
HOM M #3 Skin [MA:0000151]
HOM M #3 Sciatic nerve [MA:0001172]
HOM F #2 Thymus [MA:0000142]
HOM F #1 Nasal cavity [MA:0000284]
HOM F #1 Lung [MA:0000415]
HOM M #3 Pancreas [MA:0000120]
HOM F #2 Bone [MA:0001459]
HOM F #2 Mammary gland [MA:0000145]
HOM M #4 Nasal cavity [MA:0000284]
HOM M #4 Trachea [MA:0000441]
HOM F #1 Stomach [MA:0000353]
HOM M #4 Stomach [MA:0000353]
HOM M #3 Prostate gland [MA:0000404]
HOM F #1 Sternum [MA:0001331]
HOM F #1 Spleen [MA:0000141]
HOM M #3 Tongue [MA:0000347]
HOM F #2 Esophagus [MA:0000352]
HOM F #1 Kidney [MA:0000368]
HOM M #4 Large intestine [MA:0000333]
HOM M #4 Urinary bladder [MA:0000380]
HOM M #4 Salivary gland [MA:0000346]
HOM F #1 Knee joint [MA:0000471]
HOM F #1 Trigeminal V ganglion [MA:0001080]
HOM F #2 Bone marrow [MA:0000134]
HOM M #4 Bone [MA:0001459]
HOM F #1 Tooth [MA:0000348]
HOM M #3 Trigeminal V ganglion [MA:0001080]
HOM F #2 Lung [MA:0000415]
HOM M #4 Seminal vesicle [MA:0000410]
HOM M #4 Testis [MA:0000411]
HOM M #3 Small intestine [MA:0000337]
HOM F #2 Nasal cavity [MA:0000284]
HOM F #2 Trachea [MA:0000441]
HOM M #3 Brain [MA:0000168]
HOM F #1 Thyroid
HOM M #3 Adrenal gland [MA:0000116]
HOM F #1 Femur [MA:0001359]
HOM F #1 Pancreas [MA:0000120]
HOM M #3 Spleen [MA:0000141]
HOM F #1 Skeletal muscle [MA:0003148]
HOM M #3 Tibia [MA:0001361]
HOM F #2 Heart [MA:0000072]
HOM F #1 Skin [MA:0000151]
HOM F #2 Liver [MA:0000358]
HOM F #1 Gall bladder [MA:0000356]
HOM M #3 Kidney [MA:0000368]

Associated histopathology images

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