Histopathology data for Apool

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HEM M #2 Liver [MA:0000358] normal [MPATH:458] 0 0
HEM M #2 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HOM F #4 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HOM F #4 Tibia [MA:0001361] normal [MPATH:458] 0 0
HOM F #4 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HOM F #4 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HEM M #2 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HOM F #1 Ovary [MA:0000384] normal [MPATH:458] 0 0
HOM F #1 Femur [MA:0001359] normal [MPATH:458] 0 0
HOM F #4 Heart [MA:0000072] normal [MPATH:458] 0 0
HEM M #2 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HEM M #2 Tibia [MA:0001361] normal [MPATH:458] 0 0
HEM M #3 Sternum [MA:0001331] normal [MPATH:458] 0 0
HEM M #2 Heart [MA:0000072] normal [MPATH:458] 0 0
HEM M #2 Brain [MA:0000168] normal [MPATH:458] 0 0
HEM M #2 Lung [MA:0000415] normal [MPATH:458] 0 0
HOM F #1 Spleen [MA:0000141] normal [MPATH:458] 0 0
HEM M #3 Kidney [MA:0000368] normal [MPATH:458] 0 0
HOM F #1 Trachea [MA:0000441] normal [MPATH:458] 0 0
HOM F #1 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HOM F #4 Eye with optic nerve normal [MPATH:458] 0 0
HOM F #1 Skin [MA:0000151] normal [MPATH:458] 0 0
HEM M #3 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HEM M #3 Femur [MA:0001359] normal [MPATH:458] 0 0
HOM F #1 Kidney [MA:0000368] normal [MPATH:458] 0 0
HEM M #2 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HOM F #4 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HOM F #1 Mammary gland [MA:0000145] normal [MPATH:458] 0 0
HEM M #2 Epididymis [MA:0000397] normal [MPATH:458] 0 0
HOM F #4 Brain [MA:0000168] normal [MPATH:458] 0 0
HOM F #1 Thymus [MA:0000142] normal [MPATH:458] 0 0
HEM M #2 Eye with optic nerve normal [MPATH:458] 0 0
HEM M #2 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HOM F #4 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HEM M #3 Thymus [MA:0000142] developmental and structural abnormality [MPATH:55] 1 0 cyst MPATH:62 multi-localised Epithelial cyst
HEM M #3 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HEM M #3 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0
HEM M #2 Skin [MA:0000151] normal [MPATH:458] 0 0
HEM M #3 Trachea [MA:0000441] normal [MPATH:458] 0 0
HOM F #1 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HEM M #3 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HOM F #1 Eye with optic nerve hypoplasia [MPATH:133] 3 0 Microphtalmia
HOM F #4 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HOM F #4 Skin [MA:0000151] normal [MPATH:458] 0 0
HEM M #3 Thyroid normal [MPATH:458] 0 0
HEM M #3 Stomach [MA:0000353] normal [MPATH:458] 0 0
HOM F #1 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HEM M #2 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HEM M #2 Trachea [MA:0000441] normal [MPATH:458] 0 0
HOM F #1 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HEM M #3 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HEM M #3 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HEM M #3 Testes normal [MPATH:458] 0 0
HEM M #2 Thymus [MA:0000142] normal [MPATH:458] 0 0
HOM F #1 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HOM F #4 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HOM F #1 Sternum [MA:0001331] process of degenerative change [MPATH:14] Not applicable 0 chronic focally extensive Sternal dislocation (fissure).
HOM F #1 Knee joint [MA:0000471] normal [MPATH:458] 0 0
HEM M #3 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HEM M #3 Spleen [MA:0000141] normal [MPATH:458] 0 0
HOM F #4 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HOM F #4 Femur [MA:0001359] normal [MPATH:458] 0 0
HOM F #4 Thyroid normal [MPATH:458] 0 0
HEM M #3 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HEM M #3 Brain [MA:0000168] normal [MPATH:458] 0 0
HEM M #2 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HEM M #3 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HEM M #2 Prostate normal [MPATH:458] 0 0
HOM F #4 Liver [MA:0000358] normal [MPATH:458] 0 0
HEM M #3 Tibia [MA:0001361] normal [MPATH:458] 0 0
HEM M #3 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HOM F #4 Uterus [MA:0000389] normal [MPATH:458] 0 0
HEM M #2 Sternum [MA:0001331] normal [MPATH:458] 0 0
HEM M #2 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HEM M #2 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HOM F #4 Sternum [MA:0001331] normal [MPATH:458] 0 0
HEM M #2 Kidney [MA:0000368] normal [MPATH:458] 0 0
HOM F #1 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HOM F #4 Kidney [MA:0000368] normal [MPATH:458] 0 0
HEM M #3 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HOM F #1 Lung [MA:0000415] normal [MPATH:458] 0 0
HEM M #2 Seminal vesicle [MA:0000410] normal [MPATH:458] 0 0
HEM M #2 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HOM F #4 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HEM M #2 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HOM F #1 Uterus [MA:0000389] normal [MPATH:458] 0 0
HEM M #2 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HEM M #3 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HOM F #1 Bone marrow [MA:0000134] normal [MPATH:458] 0 0
HEM M #2 Stomach [MA:0000353] normal [MPATH:458] 0 0
HEM M #3 Liver [MA:0000358] normal [MPATH:458] 0 0
HOM F #4 Ovary [MA:0000384] normal [MPATH:458] 0 0
HOM F #4 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HOM F #1 Stomach [MA:0000353] normal [MPATH:458] 0 0
HOM F #1 Heart [MA:0000072] normal [MPATH:458] 0 0
HEM M #3 Heart [MA:0000072] normal [MPATH:458] 0 0
HOM F #1 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HEM M #3 Lung [MA:0000415] normal [MPATH:458] 0 0
HOM F #4 Spleen [MA:0000141] normal [MPATH:458] 0 0
HOM F #4 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HOM F #4 Trachea [MA:0000441] normal [MPATH:458] 0 0
HEM M #2 Salivary gland [MA:0000346] normal [MPATH:458] 0 0
HOM F #1 Lymph node [MA:0000139] normal [MPATH:458] 0 0
HEM M #2 Spleen [MA:0000141] normal [MPATH:458] 0 0
HEM M #2 Femur [MA:0001359] normal [MPATH:458] 0 0
HOM F #1 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HEM M #3 Epididymis [MA:0000397] normal [MPATH:458] 0 0
HOM F #1 Adrenal gland [MA:0000116] normal [MPATH:458] 0 0
HOM F #1 Brain [MA:0000168] developmental and structural abnormality [MPATH:55] 1 0 dermoid cyst MPATH:311 multi-localised Dermoid cyst (dermoid sinus)
HOM F #4 Mammary gland [MA:0000145] normal [MPATH:458] 0 0
HOM F #4 Thymus [MA:0000142] normal [MPATH:458] 0 0
HOM F #1 Thyroid normal [MPATH:458] 0 0
HOM F #4 Stomach [MA:0000353] normal [MPATH:458] 0 0
HOM F #1 Gall bladder [MA:0000356] normal [MPATH:458] 0 0
HEM M #3 Prostate normal [MPATH:458] 0 0
HEM M #3 Eye with optic nerve developmental dysplasia [MPATH:64] 1 0 localized Focal retinal fold/dysplasia
HOM F #1 Liver [MA:0000358] normal [MPATH:458] 0 0
HEM M #3 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HEM M #3 Skin [MA:0000151] normal [MPATH:458] 0 0
HOM F #4 Large intestine [MA:0000333] normal [MPATH:458] 0 0
HEM M #3 Brown adipose tissue [MA:0000057] normal [MPATH:458] 0 0
HOM F #4 Esophagus [MA:0000352] normal [MPATH:458] 0 0
HEM M #3 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HOM F #1 Tibia [MA:0001361] normal [MPATH:458] 0 0
HOM F #1 Spinal cord [MA:0000216] normal [MPATH:458] 0 0
HEM M #2 Thyroid normal [MPATH:458] 0 0
HEM M #2 Small intestine [MA:0000337] normal [MPATH:458] 0 0
HOM F #4 Pancreas [MA:0000120] normal [MPATH:458] 0 0
HOM F #4 Lung [MA:0000415] normal [MPATH:458] 0 0
HEM M #2 Urinary bladder [MA:0000380] normal [MPATH:458] 0 0
HOM F #1 Trigeminal V nerve [MA:0001100] normal [MPATH:458] 0 0
HOM F #4 Skeletal muscle [MA:0003148] normal [MPATH:458] 0 0
HEM M #2 Testes normal [MPATH:458] 0 0
HEM M #3 Knee joint [MA:0000471] normal [MPATH:458] 0 0

Associated histopathology images

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