Gene Summary
IMPC Data Collections
- Body Weight Measurements
- No Embryo Imaging Data
- Viability Data
The IMPC applies a panel of phenotyping screens to characterise single-gene knockout mice by comparison to wild types. Click on the different tabs to visualise significant phenotypes identified by the IMPC, as well as all data that was measured.
An assay measuring the expression of lacZ shows the tissue where the gene is expressed.
Anatomy | Images | Zygosity | Mutant Expr |
---|---|---|---|
Bone | Wholemount images | heterozygote | Ambiguous |
Bone | Wholemount images | homozygote | Ambiguous |
Brain | Wholemount images | heterozygote | 100% (4 of 4) |
Brain | Wholemount images | homozygote | 100% (2 of 2) |
Cecum | Wholemount images | heterozygote | Ambiguous |
Cecum | Wholemount images | homozygote | Ambiguous |
Chest bone | Wholemount images | heterozygote | Ambiguous |
Chest bone | Wholemount images | homozygote | Ambiguous |
Duodenum | Wholemount images | heterozygote | 0.0% (0 of 4) |
Duodenum | Wholemount images | homozygote | 0.0% (0 of 2) |
Epididymis | Wholemount images | heterozygote | Not available |
Epididymis | Wholemount images | homozygote | Not available |
Esophagus | Wholemount images | homozygote | Ambiguous |
Eye | Wholemount images | heterozygote | 0.0% (0 of 4) |
Eye | Wholemount images | homozygote | Ambiguous |
Gall bladder | Wholemount images | heterozygote | Ambiguous |
Gall bladder | Wholemount images | homozygote | Ambiguous |
Harderian gland | Wholemount images | heterozygote | 100% (4 of 4) |
Harderian gland | Wholemount images | homozygote | 100% (2 of 2) |
Ileum | Wholemount images | heterozygote | Ambiguous |
Ileum | Wholemount images | homozygote | Ambiguous |
Jejunum | Wholemount images | heterozygote | Ambiguous |
Jejunum | Wholemount images | homozygote | Ambiguous |
Kidney | Wholemount images | heterozygote | 100% (4 of 4) |
Kidney | Wholemount images | homozygote | 100% (2 of 2) |
Large intestine | Wholemount images | heterozygote | Ambiguous |
Large intestine | Wholemount images | homozygote | Ambiguous |
Liver | Wholemount images | heterozygote | 0.0% (0 of 4) |
Liver | Wholemount images | homozygote | 0.0% (0 of 2) |
Lung | Wholemount images | heterozygote | Ambiguous |
Lung | Wholemount images | homozygote | 100% (2 of 2) |
Lymph node | Wholemount images | heterozygote | 0.0% (0 of 4) |
Lymph node | Wholemount images | homozygote | Not available |
Main olfactory bulb | Wholemount images | heterozygote | 0.0% (0 of 4) |
Main olfactory bulb | Wholemount images | homozygote | Ambiguous |
Mesenteric lymph node | Wholemount images | heterozygote | Ambiguous |
Mesenteric lymph node | Wholemount images | homozygote | Ambiguous |
Ovary | Wholemount images | heterozygote | Not available |
Ovary | Wholemount images | homozygote | Not available |
Oviduct | Wholemount images | heterozygote | Not available |
Oviduct | Wholemount images | homozygote | Not available |
Pancreas | Wholemount images | heterozygote | 100% (4 of 4) |
Pancreas | Wholemount images | homozygote | 100% (2 of 2) |
Parathyroid gland | Wholemount images | heterozygote | Ambiguous |
Parathyroid gland | Wholemount images | homozygote | Not available |
Parotid gland | Wholemount images | heterozygote | 100% (4 of 4) |
Parotid gland | Wholemount images | homozygote | 100% (2 of 2) |
Penis | Wholemount images | heterozygote | 0.0% (0 of 4) |
Penis | Wholemount images | homozygote | Not available |
Pituitary gland | Wholemount images | heterozygote | 0.0% (0 of 4) |
Pituitary gland | Wholemount images | homozygote | Ambiguous |
Prostate gland | Wholemount images | heterozygote | Not available |
Prostate gland | Wholemount images | homozygote | Not available |
Skin | Wholemount images | heterozygote | 100% (4 of 4) |
Skin | Wholemount images | homozygote | 100% (2 of 2) |
Spinal cord | Wholemount images | heterozygote | 100% (4 of 4) |
Spinal cord | Wholemount images | homozygote | 100% (2 of 2) |
Spleen | Wholemount images | heterozygote | Ambiguous |
Spleen | Wholemount images | homozygote | Ambiguous |
Stomach | Wholemount images | heterozygote | Ambiguous |
Stomach | Wholemount images | homozygote | Ambiguous |
Sublingual gland | Wholemount images | heterozygote | Ambiguous |
Sublingual gland | Wholemount images | homozygote | Ambiguous |
Submandibular gland | Wholemount images | heterozygote | Ambiguous |
Submandibular gland | Wholemount images | homozygote | Ambiguous |
Testis | Wholemount images | heterozygote | 50% (2 of 4) |
Testis | Wholemount images | homozygote | 50% (1 of 2) |
Thymus | Wholemount images | heterozygote | 0.0% (0 of 4) |
Thymus | Wholemount images | homozygote | Ambiguous |
Thyroid gland | Wholemount images | heterozygote | Ambiguous |
Thyroid gland | Wholemount images | homozygote | Ambiguous |
Tongue | Wholemount images | heterozygote | 100% (4 of 4) |
Tongue | Wholemount images | homozygote | 100% (2 of 2) |
Trachea | Wholemount images | heterozygote | 0.0% (0 of 4) |
Trachea | Wholemount images | homozygote | Ambiguous |
Trigeminal V nerve | Wholemount images | heterozygote | 0.0% (0 of 4) |
Trigeminal V nerve | Wholemount images | homozygote | 0.0% (0 of 2) |
Urinary bladder | Wholemount images | heterozygote | Ambiguous |
Urinary bladder | Wholemount images | homozygote | Ambiguous |
Uterus | Wholemount images | heterozygote | 50% (2 of 4) |
Uterus | Wholemount images | homozygote | 50% (1 of 2) |
Vagina | Wholemount images | heterozygote | 50% (2 of 4) |
Vagina | Wholemount images | homozygote | 50% (1 of 2) |
Vesicular gland | Wholemount images | heterozygote | Not available |
Vesicular gland | Wholemount images | homozygote | Not available |
Adrenal gland | N/A | heterozygote | 0.0% (0 of 4) |
Adrenal gland | N/A | homozygote | 0.0% (0 of 2) |
Aorta | N/A | heterozygote | 0.0% (0 of 4) |
Aorta | N/A | homozygote | 0.0% (0 of 2) |
Brainstem | N/A | heterozygote | 0.0% (0 of 4) |
Brainstem | N/A | homozygote | 0.0% (0 of 2) |
Brown adipose tissue | N/A | heterozygote | 0.0% (0 of 4) |
Brown adipose tissue | N/A | homozygote | 0.0% (0 of 2) |
Cartilage tissue | N/A | heterozygote | Ambiguous |
Cartilage tissue | N/A | homozygote | Ambiguous |
Cerebellum | N/A | heterozygote | 0.0% (0 of 4) |
Cerebellum | N/A | homozygote | 0.0% (0 of 2) |
Cerebral cortex | N/A | heterozygote | 0.0% (0 of 4) |
Cerebral cortex | N/A | homozygote | 0.0% (0 of 2) |
Colon | N/A | heterozygote | Ambiguous |
Colon | N/A | homozygote | Ambiguous |
Cranium | N/A | heterozygote | Ambiguous |
Cranium | N/A | homozygote | Ambiguous |
Diaphragm | N/A | heterozygote | 0.0% (0 of 4) |
Diaphragm | N/A | homozygote | 0.0% (0 of 2) |
Esophagus | N/A | heterozygote | 0.0% (0 of 4) |
Gonadal fat pad | N/A | heterozygote | 0.0% (0 of 4) |
Gonadal fat pad | N/A | homozygote | 0.0% (0 of 2) |
Heart | N/A | heterozygote | 0.0% (0 of 4) |
Heart | N/A | homozygote | 0.0% (0 of 2) |
Hindlimb | N/A | heterozygote | 0.0% (0 of 4) |
Hindlimb | N/A | homozygote | 0.0% (0 of 2) |
Hippocampus | N/A | heterozygote | 0.0% (0 of 4) |
Hippocampus | N/A | homozygote | 0.0% (0 of 2) |
Hypothalamus | N/A | heterozygote | 0.0% (0 of 4) |
Hypothalamus | N/A | homozygote | 0.0% (0 of 2) |
Lower urinary tract | N/A | heterozygote | Ambiguous |
Lower urinary tract | N/A | homozygote | Ambiguous |
Mammary gland | N/A | heterozygote | 0.0% (0 of 4) |
Mammary gland | N/A | homozygote | 0.0% (0 of 2) |
Mesenteric adipose tissue | N/A | heterozygote | 0.0% (0 of 4) |
Mesenteric adipose tissue | N/A | homozygote | 0.0% (0 of 2) |
Midbrain | N/A | heterozygote | 0.0% (0 of 4) |
Midbrain | N/A | homozygote | 0.0% (0 of 2) |
Olfactory lobe | N/A | heterozygote | 0.0% (0 of 4) |
Olfactory lobe | N/A | homozygote | 0.0% (0 of 2) |
Oral epithelium | N/A | heterozygote | 0.0% (0 of 4) |
Oral epithelium | N/A | homozygote | 0.0% (0 of 2) |
Peripheral nervous system | N/A | heterozygote | 0.0% (0 of 4) |
Peripheral nervous system | N/A | homozygote | 0.0% (0 of 2) |
Peyer's patch | N/A | heterozygote | 0.0% (0 of 4) |
Peyer's patch | N/A | homozygote | 0.0% (0 of 2) |
Quadriceps | N/A | heterozygote | 0.0% (0 of 4) |
Quadriceps | N/A | homozygote | 0.0% (0 of 2) |
Sciatic nerve | N/A | heterozygote | 0.0% (0 of 4) |
Sciatic nerve | N/A | homozygote | 0.0% (0 of 2) |
Skeletal muscle | N/A | heterozygote | 0.0% (0 of 4) |
Skeletal muscle | N/A | homozygote | 0.0% (0 of 2) |
Small intestine | N/A | heterozygote | Ambiguous |
Small intestine | N/A | homozygote | Ambiguous |
Stomach pyloric region | N/A | heterozygote | 0.0% (0 of 4) |
Stomach pyloric region | N/A | homozygote | 0.0% (0 of 2) |
Striatum | N/A | heterozygote | 0.0% (0 of 4) |
Striatum | N/A | homozygote | 0.0% (0 of 2) |
Thalamus | N/A | heterozygote | 0.0% (0 of 4) |
Thalamus | N/A | homozygote | 0.0% (0 of 2) |
Vas deferens | N/A | heterozygote | Not available |
Vas deferens | N/A | homozygote | Not available |
Vascular system | N/A | heterozygote | 0.0% (0 of 4) |
Vascular system | N/A | homozygote | 0.0% (0 of 2) |
White adipose tissue | N/A | heterozygote | 0.0% (0 of 4) |
White adipose tissue | N/A | homozygote | 0.0% (0 of 2) |
An assay measuring the expression of lacZ shows the tissue where the gene is expressed.
Anatomy | Images | Zygosity | Mutant Expr |
---|---|---|---|
Embryo | N/A | heterozygote | 0.0% (0 of 5) |
Head | N/A | heterozygote | 0.0% (0 of 5) |
Brain | N/A | heterozygote | 0.0% (0 of 5) |
Ear | N/A | heterozygote | 0.0% (0 of 5) |
Eye | N/A | heterozygote | 0.0% (0 of 5) |
Footplate | N/A | heterozygote | 0.0% (0 of 5) |
Forearm | N/A | heterozygote | 0.0% (0 of 5) |
Forebrain | N/A | heterozygote | 0.0% (0 of 5) |
Forelimb | N/A | heterozygote | 0.0% (0 of 5) |
Handplate | N/A | heterozygote | 0.0% (0 of 5) |
Heart | N/A | heterozygote | 0.0% (0 of 5) |
Hindbrain | N/A | heterozygote | 0.0% (0 of 5) |
Hindlimb | N/A | heterozygote | 0.0% (0 of 5) |
Liver | N/A | heterozygote | 0.0% (0 of 5) |
Lower leg | N/A | heterozygote | 0.0% (0 of 5) |
Lung | N/A | heterozygote | 0.0% (0 of 5) |
Mandibular process | N/A | heterozygote | 0.0% (0 of 5) |
Maxillary process | N/A | heterozygote | 0.0% (0 of 5) |
Midbrain | N/A | heterozygote | 0.0% (0 of 5) |
Oral cavity | N/A | heterozygote | 0.0% (0 of 5) |
Skin | N/A | heterozygote | 0.0% (0 of 5) |
Tail somite | N/A | heterozygote | 0.0% (0 of 5) |
Tail | N/A | heterozygote | 0.0% (0 of 5) |
Upper arm | N/A | heterozygote | 0.0% (0 of 5) |
Upper leg | N/A | heterozygote | 0.0% (0 of 5) |
Background staining occurs in wild type mice and embryos at an incidental rate.
Anatomy | Background staining in controls (WT) |
---|---|
adrenal gland | 0.0% |
aorta | 0.0% |
bone | 0.0% |
brain | 0.0% |
brainstem | 0.0% |
brown adipose tissue | 0.0% |
cartilage tissue | 0.0% |
cecum | 0.0% |
cerebellum | 0.0% |
cerebral cortex | 0.0% |
chest bone | |
colon | |
cranium | |
diaphragm | 0.0% |
duodenum | 0.0% |
epididymis | Unavailable |
esophagus | 0.0% |
eye | 0.0% |
gall bladder | 0.0% |
gonadal fat pad | 0.0% |
harderian gland | |
heart | 0.0% |
hindlimb | 0.0% |
hippocampus | 0.0% |
hypothalamus | 0.0% |
ileum | 0.0% |
jejunum | |
kidney | 0.0% |
large intestine | 0.0% |
liver | 0.0% |
lower urinary tract | 0.0% |
lung | 0.0% |
lymph node | 0.0% |
main olfactory bulb | 0.0% |
mammary gland | 0.0% |
mesenteric adipose tissue | 0.0% |
mesenteric lymph node | |
midbrain | 0.0% |
olfactory lobe | 0.0% |
oral epithelium | 0.0% |
ovary | 0.0% |
oviduct | 0.0% |
pancreas | 0.0% |
parathyroid gland | 0.0% |
parotid gland | 0.0% |
penis | 0.0% |
peripheral nervous system | 0.0% |
peyers patch | 0.0% |
pituitary gland | 0.0% |
prostate gland | 0.0% |
quadriceps | 0.0% |
sciatic nerve | 0.0% |
skeletal muscle | 0.0% |
skin | 0.0% |
small intestine | 0.0% |
spinal cord | 0.0% |
spleen | 0.0% |
stomach | 0.0% |
stomach pyloric region | 0.0% |
striatum | 0.0% |
sublingual gland | 0.0% |
submandibular gland | 0.0% |
testis | 0.0% |
thalamus | 0.0% |
thymus | 0.0% |
thyroid gland | 0.0% |
tongue | 0.0% |
trachea | 0.0% |
trigeminal v nerve | 0.0% |
urinary bladder | |
uterus | 0.0% |
vagina | 0.0% |
vas deferens | Unavailable |
vascular system | 0.0% |
vesicular gland | Unavailable |
white adipose tissue | 0.0% |
Background staining occurs in wild type mice and embryos at an incidental rate.
Background staining occurs in wild type embryos at a measurable rate.
Anatomy | Background staining in controls(WT) |
---|---|
brain | 0.0% |
ear | 0.0% |
embryo | 0.0% |
eye | 0.0% |
footplate | 0.0% |
forearm | Ambiguous |
forebrain | 0.0% |
forelimb | 0.0% |
handplate | 0.0% |
head | 0.0% |
heart | 0.0% |
hindbrain | 0.0% |
hindlimb | 0.0% |
liver | 0.0% |
lower leg | Ambiguous |
lung | 0.0% |
mandibular process | 0.0% |
maxillary process | 0.0% |
midbrain | 0.0% |
oral cavity | 0.0% |
skin | 0.0% |
tail | 0.0% |
tail somite group | 0.0% |
upper arm | Ambiguous |
upper leg | Ambiguous |
The analysis uses data from IMPC, along with published data on other mouse mutants, in comparison to human disease reports in OMIM, Orphanet, and DECIPHER.
Phenotype comparisons summarize the similarity of mouse phenotypes with human disease phenotypes.
The table below shows human diseases associated to Atp13a2 by orthology or direct annotation.
Disease | Similarity of phenotypes |
Matching phenotypes | Source |
---|---|---|---|
Spastic Paraplegia 78, Autosomal Recessive | Impaired vibratory sensation, Ataxia, Distal sensory impairment, Impaired tactile sensation, Gait... | OMIM:617225 | |
Atp13A2-Related Juvenile Neuronal Ceroid Lipofuscinosis | Gait disturbance, Cognitive impairment, Depression | ORPHA:314632 | |
Autosomal Recessive Spastic Paraplegia Type 78 | Progressive cerebellar ataxia, Progressive gait ataxia, Dementia, Cognitive impairment, Difficult... | ORPHA:513436 | |
Kufor-Rakeb Syndrome | Ataxia, Akinesia, Distal sensory impairment, Dementia, Gait disturbance | OMIM:606693 | |
Kufor-Rakeb Syndrome | Short attention span, Confusion, Dementia, Gait disturbance, Difficulty walking, Mental deteriora... | ORPHA:306674 |
The table below shows human diseases predicted to be associated to Atp13a2 by phenotypic similarity.
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MGI Allele | Allele Type | Produced |
---|---|---|
Atp13a2tm1e(EUCOMM)Wtsi | Targeted, non-conditional allele | ES Cells |
Atp13a2tm40031(L1L2_gt0) | KO first allele (reporter-tagged insertion with conditional potential) | Targeting vectors |
Atp13a2tm1e(EUCOMM)Hmgu | Targeted, non-conditional allele | ES Cells |
Atp13a2tm1b(EUCOMM)Hmgu | Reporter-tagged deletion allele (with selection cassette) | Mice |
Atp13a2tm1a(EUCOMM)Hmgu | KO first allele (reporter-tagged insertion with conditional potential) | Mice, Targeting vectors, ES Cells |
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