Gene: Pcdh9

Order

Name protocadherin 9

Synonyms
  • A730003J17Rik
  • LOC382930
  • 1500001L12Rik
  • C630029H24Rik
  • C530050I23Rik

Status ES CellsMice
tm1
Mice
tm1.1
phenotype data available

Links MGI:1306801    Ensembl Gene    Ensembl Orthologs    My Genes   

Viability Homozygous - Subviable

Phenotype associations for Pcdh9

Significant     Not Significant     Not tested    
All Phenotypes Summary

Based on automated MP annotations supported by experiments on knockout mouse models. Click on icons to go to all Pcdh9 data for that phenotype.

Significant Phenotypes

System Phenotype Allele Zyg Sex Life Stage P Value Data
preweaning lethality, incomplete penetrance Pcdh9tm1.1(KOMP)Vlcg HOM Female Male n/a 0.0
abnormal behavior Pcdh9tm1.1(KOMP)Vlcg HET Female Male postnatal 4.35E-27
hyperactivity Pcdh9tm1.1(KOMP)Vlcg HET Female Male postnatal 5.03E-22
increased vertical activity Pcdh9tm1.1(KOMP)Vlcg HET Female Male postnatal 1.94E-12
decreased grip strength Pcdh9tm1.1(KOMP)Vlcg HET Female Male postnatal 5.26E-10
abnormal behavioral response to light Pcdh9tm1.1(KOMP)Vlcg HET Female Male postnatal 5.97E-6

Download data as: TSV XLS



Expression

IMPC lacZ Expression Data
Show expression table

 Expression    No Expression    No Tissue Available    Ambiguous  

Show Wildtype Expression
Anatomy #HET Specimens HOM Images? WT Expr Mutant Expr Images
Adrenal gland 2 No (5/393)
Aorta 2 No (1/562)
Brain 2 No (6/562) (2/2)
Brainstem 2 No (4/562) (2/2)
Brown adipose tissue 2 No
Cartilage tissue 2 No (1/562) (2/2)
Cerebellum 2 No (4/562) (2/2)
Cerebral cortex 2 No (5/562) (2/2)
Epididymis 2 No (4/106) (1/2)
Esophagus 2 No (2/393)
Eye 2 No (1/562) (2/2)
Heart 2 No (3/562) (2/2)
Hippocampus 2 No (5/562) (2/2)
Hypothalamus 2 No (4/562) (2/2)
Kidney 2 No (20/562)
Large intestine 2 No (12/562) (2/2)
Liver 2 No
Lower urinary tract 2 No (3/562)
Lung 2 No (3/562)
Lymph node 2 No (1/562)
Mammary gland 2 No
Midbrain 2 No (2/2)
Olfactory lobe 2 No (4/393) (2/2)
Ovary 2 No (1/562) (1/2)
Oviduct 2 No (2/562) (1/2)
Pancreas 2 No (6/562) (2/2)
Peripheral nervous system 2 No (3/562) (2/2)
Peyer's patch 2 No (1/393)
Pituitary gland 2 No (1/562) (2/2)
Prostate gland 2 No (5/562)
Skeletal muscle 2 No
Skin 2 No (1/562)
Small intestine 2 No (11/562) (2/2)
Spinal cord 2 No (3/562) (2/2)
Spleen 2 No (4/562)
Stomach 2 No (9/562) (2/2)
Striatum 2 No (4/562) (2/2)
Submandibular gland 2 No (1/104)
Testis 2 No (4/562) (1/2)
Thalamus 2 No (2/2)
Thymus 2 No
Thyroid gland 2 No (16/562)
Trachea 2 No (3/562)
Urinary bladder 2 No (2/2)
Uterus 2 No (2/562) (1/2)
Vascular system 2 No (1/393) (2/2)
Vesicular gland 2 No
White adipose tissue 2 No
Expression in Anatomogram

Tissues/organs lacZ+ expression

    postnatal mouse
    digestive system
    cardiovascular system
    nervous system
    set of connective tissues
    sensory organ
    reproductive system
    trunk
    urinary system
No expression image was found for this adult tab

 Expression    No Expression    No Tissue Available    Ambiguous  

Anatomy #HET Specimens WT Expr Mutant Expr Images
Brain 2 (6/482) (2/3)
Dorsal root ganglion 2 (1/45) Image Only
Ear 2 (1/482) (2/3)
Embryo 2 (1/482) (2/3)
Eye 2 (1/482) (2/3)
Foot 2 (1/482)
Forebrain 2 (1/482) (2/3)
Forelimb 2 (1/482) (2/3)
Fronto-nasal process 2 (1/46) Image Only
Hand 2 (1/482)
Head 2 (5/482) (2/3)
Heart 2 (1/482)
Hindbrain 2 (6/482) (2/3)
Hindlimb 2 (1/482) (2/3)
Liver 2 (1/482)
Lung 2 (1/482) Image Only
Mandibular process 2 (1/482) (2/3)
Maxillary process 2 (1/482) (2/3)
Midbrain 2 (1/482) (2/3)
Nose 2 (1/47) (2/3)
Oral cavity 2 (1/482) (2/3)
Skin 2 (1/482) (2/3)
Spinal cord 2 (1/46) (2/3)
Tail 2 (1/482) (2/3)
Tail somite 2 (1/482) (2/3)


Associated Images

Associated Images
  • X-ray: XRay Images Lateral Orientation
    6 Images
  • X-ray: XRay Images Skull Lateral Orientation
    6 Images
  • X-ray: XRay Images Forepaw
    6 Images
  • X-ray: XRay Images Dorso Ventral
    6 Images
  • Embryo LacZ: LacZ images wholemount
    12 Images
  • X-ray: XRay Images Skull Dorso Ventral Orientation
    6 Images

Disease Models

No associations by disease annotation and gene orthology found.

Order Mouse and ES Cells

Targeting Detail Product Ordering
MGI Allele Allele Type Type Map Seq Vector ES Cell Mouse Tissue Enquiry
Pcdh9tm1(KOMP)Vlcg Reporter-tagged deletion allele (with selection cassette)
Vector
Gene
Pcdh9tm1.1(KOMP)Vlcg Reporter-tagged deletion allele (post Cre, with no selection cassette)
Vector
Gene