Ontologies in Procedure: Gross Morphology Embryo E12.5 IMPC_GEM_003

simpleParameter: Pericardium Morphology IMPC_GEM_007_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal pericardium morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal pericardium morphology

Ontology ID: MP:0000288

Sex:

simpleParameter: Visceral yolk sac morphology IMPC_GEM_017_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal visceral yolk sac morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal visceral yolk sac morphology

Ontology ID: MP:0001718

Sex:

simpleParameter: Embryo Size IMPC_GEM_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryo size

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryo size

Ontology ID: MP:0001697

Sex:

simpleParameter: Ear Morphology IMPC_GEM_021_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal ear morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal ear morphology

Ontology ID: MP:0002102

Sex:

simpleParameter: Skin Appearance IMPC_GEM_024_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal skin appearance

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal skin appearance

Ontology ID: MP:0009931

Sex:

simpleParameter: Limb Bud Morphology IMPC_GEM_027_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal limb bud morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal limb bud morphology

Ontology ID: MP:0005650

Sex:

simpleParameter: Limb Plate Morphology IMPC_GEM_028_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryonic autopod plate morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryonic autopod plate morphology

Ontology ID: MP:0004576

Sex:

simpleParameter: Tail Morphology IMPC_GEM_029_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal tail morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal tail morphology

Ontology ID: MP:0002111

Sex:

simpleParameter: Liver Size IMPC_GEM_032_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal liver size

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal liver size

Ontology ID: MP:0004848

Sex:

simpleParameter: Neural Tube Closure IMPC_GEM_036_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal neural tube closure

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal neural tube closure

Ontology ID: MP:0003720

Sex:

simpleParameter: Eye Morphology IMPC_GEM_041_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal eye morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal eye morphology

Ontology ID: MP:0002092

Sex:

simpleParameter: Skull shape IMPC_GEM_047_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal cranium morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal cranium morphology

Ontology ID: MP:0000438

Sex:

simpleParameter: Comment on image IMPC_GEM_048_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: Images IMPC_GEM_049_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Experimenter ID IMPC_GEM_050_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment ID IMPC_GEM_051_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment Manufacturer IMPC_GEM_052_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment Model IMPC_GEM_053_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Fixative IMPC_GEM_054_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Time of Dissection IMPC_GEM_055_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Somite Stage IMPC_GEM_056_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Time of dark cycle start IMPC_GEM_057_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Time of dark cycle end IMPC_GEM_058_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date equipment last calibrated IMPC_GEM_059_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Pale yolk sac IMPC_GEM_016_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pale yolk sac

ABNORMAL

Option:

Increment ID:

Ontology Term: pale yolk sac

Ontology ID: MP:0001722

Sex:

simpleParameter: Pallor IMPC_GEM_025_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pallor

ABNORMAL

Option:

Increment ID:

Ontology Term: pallor

Ontology ID: MP:0003717

Sex:

simpleParameter: Blebs IMPC_GEM_026_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL bleb

ABNORMAL

Option:

Increment ID:

Ontology Term: bleb

Ontology ID: MP:0008854

Sex:

simpleParameter: Pale Liver IMPC_GEM_033_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pale liver

ABNORMAL

Option:

Increment ID:

Ontology Term: pale liver

Ontology ID: MP:0000603

Sex:

simpleParameter: Microphthalmia IMPC_GEM_043_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL microphthalmia

ABNORMAL

Option:

Increment ID:

Ontology Term: microphthalmia

Ontology ID: MP:0001297

Sex:

simpleParameter: Anophthalmia IMPC_GEM_044_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL anophthalmia

ABNORMAL

Option:

Increment ID:

Ontology Term: anophthalmia

Ontology ID: MP:0001293

Sex:

simpleParameter: Severely Dysmorphic IMPC_GEM_060_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryo development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryo development

Ontology ID: MP:0001672

Sex:

simpleParameter: Abdominal wall IMPC_GEM_061_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal abdominal wall morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal abdominal wall morphology

Ontology ID: MP:0003257

Sex:

simpleParameter: Craniofacial morphology IMPC_GEM_062_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal craniofacial morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal craniofacial morphology

Ontology ID: MP:0000428

Sex:

simpleParameter: Facial cleft IMPC_GEM_063_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL facial cleft

ABNORMAL

Option:

Increment ID:

Ontology Term: facial cleft

Ontology ID: MP:0008797

Sex:

simpleParameter: Facial hypoplasia IMPC_GEM_064_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal facial morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal facial morphology

Ontology ID: MP:0003743

Sex:

simpleParameter: Heart looping IMPC_GEM_065_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal heart looping

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal heart looping

Ontology ID: MP:0000269

Sex:

simpleParameter: Heart morphology IMPC_GEM_066_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal heart morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal heart morphology

Ontology ID: MP:0000266

Sex:

simpleParameter: Left-right axis patterning IMPC_GEM_067_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal left-right axis patterning

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal left-right axis patterning

Ontology ID: MP:0001706

Sex:

simpleParameter: Forebrain morphology IMPC_GEM_068_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal forebrain morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal forebrain morphology

Ontology ID: MP:0000783

Sex:

simpleParameter: Hindbrain morphology IMPC_GEM_069_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal hindbrain morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal hindbrain morphology

Ontology ID: MP:0000841

Sex:

simpleParameter: Midbrain morphology IMPC_GEM_070_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal midbrain morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal midbrain morphology

Ontology ID: MP:0000897

Sex:

simpleParameter: Microcephaly IMPC_GEM_071_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL microcephaly

ABNORMAL

Option:

Increment ID:

Ontology Term: microcephaly

Ontology ID: MP:0000433

Sex:

simpleParameter: Rostal-caudal patterning IMPC_GEM_072_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal rostral-caudal axis patterning

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal rostral-caudal axis patterning

Ontology ID: MP:0005221

Sex:

simpleParameter: Vascular morphology IMPC_GEM_073_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal blood vessel morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal blood vessel morphology

Ontology ID: MP:0001614

Sex:

simpleParameter: CRL IMPC_GEM_074_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryo size

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryo size

Ontology ID: MP:0001697

Sex:

simpleParameter: Delayed embryonic development IMPC_GEM_075_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL embryonic growth retardation

ABNORMAL

Option:

Increment ID:

Ontology Term: embryonic growth retardation

Ontology ID: MP:0003984

Sex:

simpleParameter: Edema IMPC_GEM_076_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL edema

ABNORMAL

Option:

Increment ID:

Ontology Term: edema

Ontology ID: MP:0001785

Sex:

simpleParameter: Hemorrhage IMPC_GEM_077_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL hemorrhage

ABNORMAL

Option:

Increment ID:

Ontology Term: hemorrhage

Ontology ID: MP:0001914

Sex:

simpleParameter: Polydactyly IMPC_GEM_078_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL polydactyly

ABNORMAL

Option:

Increment ID:

Ontology Term: polydactyly

Ontology ID: MP:0000562

Sex: