Ontologies in Procedure: Gross Morphology Embryo E12.5 IMPC_GEM_002

simpleParameter: Alive IMPC_GEM_001_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Scored IMPC_GEM_002_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Cardiovascular System IMPC_GEM_003_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL cardiovascular system phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: cardiovascular system phenotype

Ontology ID: MP:0005385

Sex:

simpleParameter: Cardiovascular Development IMPC_GEM_004_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal cardiovascular development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal cardiovascular development

Ontology ID: MP:0002925

Sex:

simpleParameter: Vascular Development IMPC_GEM_005_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal vascular development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal vascular development

Ontology ID: MP:0000259

Sex:

simpleParameter: Outflow tract development IMPC_GEM_006_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal cardiac outflow tract development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal cardiac outflow tract development

Ontology ID: MP:0006126

Sex:

simpleParameter: Pericardium Morphology IMPC_GEM_007_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal pericardium morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal pericardium morphology

Ontology ID: MP:0000288

Sex:

simpleParameter: Craniofacial IMPC_GEM_009_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL craniofacial phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: craniofacial phenotype

Ontology ID: MP:0005382

Sex:

simpleParameter: Craniofacial Development IMPC_GEM_010_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal craniofacial development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal craniofacial development

Ontology ID: MP:0003935

Sex:

simpleParameter: Embryogenesis Phenotype IMPC_GEM_011_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL embryo phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: embryo phenotype

Ontology ID: MP:0005380

Sex:

simpleParameter: Extraembryonic tissue morphology IMPC_GEM_012_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal extraembryonic tissue morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal extraembryonic tissue morphology

Ontology ID: MP:0002086

Sex:

simpleParameter: Allantois Morphology IMPC_GEM_013_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal allantois morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal allantois morphology

Ontology ID: MP:0001726

Sex:

simpleParameter: Vitelline vasculature morphology IMPC_GEM_014_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal vitelline vasculature morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal vitelline vasculature morphology

Ontology ID: MP:0003229

Sex:

simpleParameter: Vitelline vein morphology IMPC_GEM_015_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal vitelline vein morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal vitelline vein morphology

Ontology ID: MP:0010666

Sex:

simpleParameter: Visceral yolk sac morphology IMPC_GEM_017_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal visceral yolk sac morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal visceral yolk sac morphology

Ontology ID: MP:0001718

Sex:

simpleParameter: Chorioallantoic fusion IMPC_GEM_018_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal chorioallantoic fusion

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal chorioallantoic fusion

Ontology ID: MP:0002824

Sex:

simpleParameter: Embryo Size IMPC_GEM_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryo size

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryo size

Ontology ID: MP:0001697

Sex:

simpleParameter: Hearing/Vestibular/Ear Phenotype IMPC_GEM_020_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL hearing/vestibular/ear phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: hearing/vestibular/ear phenotype

Ontology ID: MP:0005377

Sex:

simpleParameter: Ear Morphology IMPC_GEM_021_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal ear morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal ear morphology

Ontology ID: MP:0002102

Sex:

simpleParameter: Ear Development IMPC_GEM_022_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal ear development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal ear development

Ontology ID: MP:0003938

Sex:

simpleParameter: Integument IMPC_GEM_023_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL integument phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: integument phenotype

Ontology ID: MP:0010771

Sex:

simpleParameter: Skin Appearance IMPC_GEM_024_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal skin appearance

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal skin appearance

Ontology ID: MP:0009931

Sex:

simpleParameter: Limb Bud Morphology IMPC_GEM_027_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal limb bud morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal limb bud morphology

Ontology ID: MP:0005650

Sex:

simpleParameter: Limb Plate Morphology IMPC_GEM_028_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryonic autopod plate morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryonic autopod plate morphology

Ontology ID: MP:0004576

Sex:

simpleParameter: Tail Morphology IMPC_GEM_029_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal tail morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal tail morphology

Ontology ID: MP:0002111

Sex:

simpleParameter: Liver/Biliary IMPC_GEM_030_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL liver/biliary system phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: liver/biliary system phenotype

Ontology ID: MP:0005370

Sex:

simpleParameter: Liver Morphology IMPC_GEM_031_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal liver morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal liver morphology

Ontology ID: MP:0000598

Sex:

simpleParameter: Liver Size IMPC_GEM_032_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal liver size

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal liver size

Ontology ID: MP:0004848

Sex:

simpleParameter: Nervous System IMPC_GEM_035_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL nervous system phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: nervous system phenotype

Ontology ID: MP:0003631

Sex:

simpleParameter: Neural Tube Closure IMPC_GEM_036_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal neural tube closure

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal neural tube closure

Ontology ID: MP:0003720

Sex:

simpleParameter: Forebrain development IMPC_GEM_037_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal forebrain development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal forebrain development

Ontology ID: MP:0003232

Sex:

simpleParameter: Midbrain development IMPC_GEM_038_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal midbrain development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal midbrain development

Ontology ID: MP:0003864

Sex:

simpleParameter: Hindbrain development IMPC_GEM_039_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal hindbrain development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal hindbrain development

Ontology ID: MP:0006108

Sex:

simpleParameter: Vision/Eye IMPC_GEM_040_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL vision/eye phenotype

ABNORMAL

Option:

Increment ID:

Ontology Term: vision/eye phenotype

Ontology ID: MP:0005391

Sex:

simpleParameter: Eye Morphology IMPC_GEM_041_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal eye morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal eye morphology

Ontology ID: MP:0002092

Sex:

simpleParameter: Eye Size IMPC_GEM_042_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal eye size

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal eye size

Ontology ID: MP:0002697

Sex:

simpleParameter: Failure heart looping IMPC_GEM_045_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL failure of heart looping

ABNORMAL

Option:

Increment ID:

Ontology Term: failure of heart looping

Ontology ID: MP:0004251

Sex:

simpleParameter: Gastrulation IMPC_GEM_046_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal gastrulation

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal gastrulation

Ontology ID: MP:0001695

Sex:

simpleParameter: Skull shape IMPC_GEM_047_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal cranium morphology

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal cranium morphology

Ontology ID: MP:0000438

Sex:

simpleParameter: Comment on image IMPC_GEM_048_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: Images IMPC_GEM_049_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Experimenter ID IMPC_GEM_050_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment ID IMPC_GEM_051_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment Manufacturer IMPC_GEM_052_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment Model IMPC_GEM_053_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Fixative IMPC_GEM_054_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Time of Dissection IMPC_GEM_055_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Somite Stage IMPC_GEM_056_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Time of dark cycle start IMPC_GEM_057_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Time of dark cycle end IMPC_GEM_058_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date equipment last calibrated IMPC_GEM_059_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Pale yolk sac IMPC_GEM_016_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pale yolk sac

ABNORMAL

Option:

Increment ID:

Ontology Term: pale yolk sac

Ontology ID: MP:0001722

Sex:

simpleParameter: Pallor IMPC_GEM_025_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pallor

ABNORMAL

Option:

Increment ID:

Ontology Term: pallor

Ontology ID: MP:0003717

Sex:

simpleParameter: Blebs IMPC_GEM_026_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL bleb

ABNORMAL

Option:

Increment ID:

Ontology Term: bleb

Ontology ID: MP:0008854

Sex:

simpleParameter: Pale Liver IMPC_GEM_033_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pale liver

ABNORMAL

Option:

Increment ID:

Ontology Term: pale liver

Ontology ID: MP:0000603

Sex:

simpleParameter: Microphthalmia IMPC_GEM_043_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL microphthalmia

ABNORMAL

Option:

Increment ID:

Ontology Term: microphthalmia

Ontology ID: MP:0001297

Sex:

simpleParameter: Anophthalmia IMPC_GEM_044_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL anophthalmia

ABNORMAL

Option:

Increment ID:

Ontology Term: anophthalmia

Ontology ID: MP:0001293

Sex:

simpleParameter: Severely Dysmorphic IMPC_GEM_060_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal embryo development

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal embryo development

Ontology ID: MP:0001672

Sex:

simpleParameter: Absent Heartbeat IMPC_GEM_008_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL absent heartbeat

ABNORMAL

Option:

Increment ID:

Ontology Term: absent heartbeat

Ontology ID: MP:0004086

Sex:

simpleParameter: Gastroschisis (herniated abdominal wall) IMPC_GEM_034_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL herniated abdominal wall

ABNORMAL

Option:

Increment ID:

Ontology Term: herniated abdominal wall

Ontology ID: MP:0000757

Sex: