Ontologies in Procedure: Gross Pathology and Tissue Collection IMPC_PAT_001

ontologyParameter: Brain IMPC_PAT_001_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL brain
MA:0000168

ABNORMAL

Option:

Increment ID:

Ontology Term: brain

Ontology ID: MA:0000168

Sex:

ontologyParameter: Eye with optic nerve IMPC_PAT_002_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL eye
MA:0000261

ABNORMAL

Option:

Increment ID:

Ontology Term: eye

Ontology ID: MA:0000261

Sex:

ontologyParameter: Spinal cord IMPC_PAT_003_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL spinal cord
MA:0000216

ABNORMAL

Option:

Increment ID:

Ontology Term: spinal cord

Ontology ID: MA:0000216

Sex:

ontologyParameter: Thymus IMPC_PAT_004_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL thymus
MA:0000142

ABNORMAL

Option:

Increment ID:

Ontology Term: thymus

Ontology ID: MA:0000142

Sex:

ontologyParameter: Thyroid IMPC_PAT_005_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL thyroid gland
MA:0000129

ABNORMAL

Option:

Increment ID:

Ontology Term: thyroid gland

Ontology ID: MA:0000129

Sex:

ontologyParameter: Heart IMPC_PAT_006_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL heart
MA:0000072

ABNORMAL

Option:

Increment ID:

Ontology Term: heart

Ontology ID: MA:0000072

Sex:

ontologyParameter: Trachea IMPC_PAT_007_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL trachea
MA:0000441

ABNORMAL

Option:

Increment ID:

Ontology Term: trachea

Ontology ID: MA:0000441

Sex:

ontologyParameter: Esophagus IMPC_PAT_008_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL esophagus
MA:0000352

ABNORMAL

Option:

Increment ID:

Ontology Term: esophagus

Ontology ID: MA:0000352

Sex:

ontologyParameter: Lung IMPC_PAT_009_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL lung
MA:0000415

ABNORMAL

Option:

Increment ID:

Ontology Term: lung

Ontology ID: MA:0000415

Sex:

ontologyParameter: Liver IMPC_PAT_010_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL liver
MA:0000358

ABNORMAL

Option:

Increment ID:

Ontology Term: liver

Ontology ID: MA:0000358

Sex:

ontologyParameter: Gall bladder IMPC_PAT_011_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL gall bladder
MA:0000356

ABNORMAL

Option:

Increment ID:

Ontology Term: gall bladder

Ontology ID: MA:0000356

Sex:

ontologyParameter: Stomach IMPC_PAT_012_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL stomach
MA:0000353

ABNORMAL

Option:

Increment ID:

Ontology Term: stomach

Ontology ID: MA:0000353

Sex:

ontologyParameter: Small intestine IMPC_PAT_013_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL small intestine
MA:0000337

ABNORMAL

Option:

Increment ID:

Ontology Term: small intestine

Ontology ID: MA:0000337

Sex:

ontologyParameter: Large intestine IMPC_PAT_014_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL large intestine
MA:0000333

ABNORMAL

Option:

Increment ID:

Ontology Term: large intestine

Ontology ID: MA:0000333

Sex:

ontologyParameter: Pancreas IMPC_PAT_015_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL pancreas
MA:0000120

ABNORMAL

Option:

Increment ID:

Ontology Term: pancreas

Ontology ID: MA:0000120

Sex:

ontologyParameter: Spleen IMPC_PAT_016_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL spleen
MA:0000141

ABNORMAL

Option:

Increment ID:

Ontology Term: spleen

Ontology ID: MA:0000141

Sex:

ontologyParameter: Kidney IMPC_PAT_017_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL kidney
MA:0000368

ABNORMAL

Option:

Increment ID:

Ontology Term: kidney

Ontology ID: MA:0000368

Sex:

ontologyParameter: Adrenal gland IMPC_PAT_018_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL adrenal gland
MA:0000116

ABNORMAL

Option:

Increment ID:

Ontology Term: adrenal gland

Ontology ID: MA:0000116

Sex:

ontologyParameter: Mammary gland IMPC_PAT_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL mammary gland
MA:0000145

ABNORMAL

Option:

Increment ID:

Ontology Term: mammary gland

Ontology ID: MA:0000145

Sex:

ontologyParameter: Lymph node IMPC_PAT_020_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL lymph node
MA:0000139

ABNORMAL

Option:

Increment ID:

Ontology Term: lymph node

Ontology ID: MA:0000139

Sex:

ontologyParameter: Skin IMPC_PAT_021_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL skin
MA:0000151

ABNORMAL

Option:

Increment ID:

Ontology Term: skin

Ontology ID: MA:0000151

Sex:

ontologyParameter: Skeletal muscle IMPC_PAT_022_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL skeletal muscle tissue
MA:0002439

ABNORMAL

Option:

Increment ID:

Ontology Term: skeletal muscle tissue

Ontology ID: MA:0002439

Sex:

ontologyParameter: Urinary bladder IMPC_PAT_023_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL urinary bladder
MA:0000380

ABNORMAL

Option:

Increment ID:

Ontology Term: urinary bladder

Ontology ID: MA:0000380

Sex:

ontologyParameter: Testes IMPC_PAT_024_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL testis
MA:0000411

ABNORMAL

Option:

Increment ID:

Ontology Term: testis

Ontology ID: MA:0000411

Sex:

ontologyParameter: Epididymis IMPC_PAT_025_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL epididymis
MA:0000397

ABNORMAL

Option:

Increment ID:

Ontology Term: epididymis

Ontology ID: MA:0000397

Sex:

ontologyParameter: Prostate IMPC_PAT_026_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL prostate gland
MA:0000404

ABNORMAL

Option:

Increment ID:

Ontology Term: prostate gland

Ontology ID: MA:0000404

Sex:

ontologyParameter: Seminal vesicle IMPC_PAT_027_001

There are no Basic Ontology Annotation associations for this Parameter

ontologyParameter: Ovary IMPC_PAT_028_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL ovary
MA:0000384

ABNORMAL

Option:

Increment ID:

Ontology Term: ovary

Ontology ID: MA:0000384

Sex:

ontologyParameter: Uterus IMPC_PAT_029_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL uterus
MA:0000389

ABNORMAL

Option:

Increment ID:

Ontology Term: uterus

Ontology ID: MA:0000389

Sex:

simpleParameter: Body Weight IMPC_PAT_049_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Experimenter ID IMPC_PAT_052_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Method of sacrifice IMPC_PAT_054_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Method of Blood Collection IMPC_PAT_055_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment ID IMPC_PAT_056_001

There are no Basic Ontology Annotation associations for this Parameter

seriesMediaParameter: Images IMPC_PAT_057_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Fixative IMPC_PAT_058_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date equipment last calibrated IMPC_PAT_059_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment manufacturer IMPC_PAT_060_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment model IMPC_PAT_061_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Date of sacrifice IMPC_PAT_030_001

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: ID for sample banking protocol IMPC_PAT_031_001

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Comments (in English) IMPC_PAT_032_001

There are no Basic Ontology Annotation associations for this Parameter