Ontologies in Procedure: Combined SHIRPA and Dysmorphology IMPC_CSD_001

Parameter: Tail - presence IMPC_CSD_001_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal tail morphology
ABNORMAL Absent absent tail

Parameter: Tail - length IMPC_CSD_002_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Long long tail
ABNORMAL Short short tail
ABNORMAL abnormal tail length

Parameter: Tail - thickness IMPC_CSD_003_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Increased thick tail
ABNORMAL Decreased thin tail
ABNORMAL abnormal tail morphology

Parameter: Tail - morphology IMPC_CSD_004_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal tail morphology
ABNORMAL abnormal tail morphology

Parameter: Coat - color - back IMPC_CSD_005_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/hair pigmentation
ABNORMAL abnormal coat/hair pigmentation

Parameter: Coat - color - head IMPC_CSD_006_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/hair pigmentation
ABNORMAL abnormal coat/hair pigmentation

Parameter: Coat - color - abdomen IMPC_CSD_007_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/hair pigmentation
ABNORMAL abnormal coat/hair pigmentation

Parameter: Coat - color pattern - back IMPC_CSD_008_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/hair pigmentation
ABNORMAL abnormal coat/hair pigmentation

Parameter: Coat - color pattern - head IMPC_CSD_009_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/hair pigmentation
ABNORMAL abnormal coat/hair pigmentation

Parameter: Coat - color pattern - abdomen IMPC_CSD_010_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/hair pigmentation
ABNORMAL abnormal coat/hair pigmentation

Parameter: Coat - hair distribution - back IMPC_CSD_011_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/ hair morphology
ABNORMAL abnormal coat/ hair morphology

Parameter: Coat - hair distribution - head IMPC_CSD_012_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/ hair morphology
ABNORMAL abnormal coat/ hair morphology

Parameter: Coat - hair distribution - abdomen IMPC_CSD_013_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat/ hair morphology
ABNORMAL abnormal coat/ hair morphology

Parameter: Coat - hair texture / appearance - back IMPC_CSD_014_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat appearance
ABNORMAL abnormal coat appearance

Parameter: Coat - hair texture / appearance - head IMPC_CSD_015_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat appearance
ABNORMAL abnormal coat appearance

Parameter: Coat - hair texture / appearance - abdomen IMPC_CSD_016_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal coat appearance
ABNORMAL abnormal coat appearance

Parameter: Forelimbs - position IMPC_CSD_017_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb only - not as expected abnormal limb position
ABNORMAL Both forelimbs - not as expected abnormal limb position
ABNORMAL abnormal limb position

Parameter: Forelimbs - shape IMPC_CSD_018_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb only - not as expected abnormal forelimb morphology
ABNORMAL Both forelimbs - not as expected abnormal forelimb morphology
ABNORMAL abnormal forelimb morphology

Parameter: Forelimbs - size IMPC_CSD_019_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb only - increased abnormal forelimb morphology
ABNORMAL One forelimb only - decreased abnormal forelimb morphology
ABNORMAL Both forelimbs - increased abnormal forelimb morphology
ABNORMAL Both forelimbs - decreased abnormal forelimb morphology
ABNORMAL abnormal forelimb morphology

Parameter: Hindlimbs - position IMPC_CSD_020_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb only - not as expected abnormal limb position
ABNORMAL Both hindlimbs - not as expected abnormal limb position
ABNORMAL abnormal limb position

Parameter: Hindlimbs - shape IMPC_CSD_021_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb only - not as expected abnormal hindlimb morphology
ABNORMAL Both hindlimbs - not as expected abnormal hindlimb morphology
ABNORMAL abnormal hindlimb morphology

Parameter: Hindlimbs - size IMPC_CSD_022_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb only - increased abnormal hindlimb morphology
ABNORMAL One hindlimb only - decreased abnormal hindlimb morphology
ABNORMAL Both hindlimbs - increased abnormal hindlimb morphology
ABNORMAL Both hindlimbs - decreased abnormal hindlimb morphology
ABNORMAL abnormal hindlimb morphology

Parameter: Vibrissae - presence IMPC_CSD_023_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected absent vibrissae
ABNORMAL absent vibrissae

Parameter: Vibrissae - appearance IMPC_CSD_024_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal vibrissa morphology
ABNORMAL abnormal vibrissa morphology

Parameter: Head size IMPC_CSD_025_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Increased megacephaly
ABNORMAL Decreased microcephaly
ABNORMAL abnormal head size

Parameter: Head morphology IMPC_CSD_026_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal head morphology
ABNORMAL abnormal head morphology

Parameter: Ears IMPC_CSD_027_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal ear morphology
ABNORMAL abnormal ear morphology

Parameter: Snout size IMPC_CSD_028_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal snout morphology
ABNORMAL Increased abnormal snout morphology
ABNORMAL Decreased abnormal snout morphology

Parameter: Activity (body position) IMPC_CSD_029_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Increased activity hyperactivity
ABNORMAL Inactive lethargy
ABNORMAL abnormal locomotor behavior

Parameter: Tremor IMPC_CSD_030_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Present tremors
ABNORMAL tremors

Parameter: Transfer arousal IMPC_CSD_031_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Immediate movement increased exploration in new environment
ABNORMAL Extended freeze abnormal locomotor activation
ABNORMAL abnormal locomotor activation

Parameter: Locomotor activity IMPC_CSD_032_001

Option Increment Ontology Term Ontology ID Sex
INCREASED hyperactivity
DECREASED hypoactivity
ABNORMAL abnormal locomotor behavior

Parameter: Gait IMPC_CSD_033_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Lack of fluidity in movement abnormal gait
ABNORMAL abnormal gait

Parameter: Tail elevation IMPC_CSD_034_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Straub / elevated tail straub tail
ABNORMAL Dragging tail dragging
ABNORMAL abnormal tail movements

Parameter: Touch escape IMPC_CSD_035_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL No response unresponsive to tactile stimuli
ABNORMAL impaired touch escape response
ABNORMAL Response to touch abnormal touch escape response

Parameter: Startle response IMPC_CSD_036_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal startle reflex
ABNORMAL None absent startle reflex

Parameter: Unexpected behaviors IMPC_CSD_037_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal behavior
ABNORMAL Circling circling
ABNORMAL Jumping jumpy
ABNORMAL Retropulsion retropulsion
ABNORMAL Other abnormal behavior

Parameter: Trunk curl IMPC_CSD_038_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Present trunk curl
ABNORMAL trunk curl

Parameter: Limb grasp IMPC_CSD_039_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Present limb grasping
ABNORMAL limb grasping

Parameter: Forepaw - size IMPC_CSD_040_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal autopod morphology
ABNORMAL One forepaw increased abnormal autopod morphology
ABNORMAL One forepaw decreased abnormal autopod morphology
ABNORMAL Both forepaws increased abnormal autopod morphology
ABNORMAL Both forepaws decreased abnormal autopod morphology

Parameter: Hindpaw - size IMPC_CSD_041_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindpaw increased abnormal autopod morphology
ABNORMAL Both hindpaws increased abnormal autopod morphology
ABNORMAL abnormal autopod morphology
ABNORMAL One hindpaw decreased abnormal autopod morphology
ABNORMAL Both hindpaws decreased abnormal autopod morphology

Parameter: Forepaw - shape IMPC_CSD_042_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forepaw not as expected abnormal autopod morphology
ABNORMAL Both forepaws not as expected abnormal autopod morphology
ABNORMAL abnormal autopod morphology

Parameter: Hindpaw - shape IMPC_CSD_043_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindpaw not as expected abnormal autopod morphology
ABNORMAL Both hindpaws not as expected abnormal autopod morphology
ABNORMAL abnormal autopod morphology

Parameter: Forelimb digit - number IMPC_CSD_044_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb increased number polydactyly
ABNORMAL One forelimb decreased number oligodactyly
ABNORMAL Both forelimbs increased number polydactyly
ABNORMAL Both forelimbs decreased number oligodactyly
ABNORMAL abnormal digit morphology

Parameter: Hindlimb digit - number IMPC_CSD_045_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb increased number polydactyly
ABNORMAL One hindlimb decreased number oligodactyly
ABNORMAL Both hindlimbs increased number polydactyly
ABNORMAL Both hindlimbs decreased number oligodactyly
ABNORMAL abnormal digit morphology

Parameter: Forelimb digit - size IMPC_CSD_046_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb - fused syndactyly
ABNORMAL Both forelimbs - fused syndactyly
ABNORMAL abnormal digit morphology
ABNORMAL One forelimb - increased size abnormal digit morphology
ABNORMAL One forelimb - decreased size abnormal digit morphology
ABNORMAL Both forelimbs - increased size abnormal digit morphology
ABNORMAL Both forelimbs - decreased size abnormal digit morphology

Parameter: Hindlimb digit - size IMPC_CSD_047_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb - fused syndactyly
ABNORMAL Both hindlimbs - fused syndactyly
ABNORMAL abnormal digit morphology
ABNORMAL One hindlimb - increased size abnormal digit morphology
ABNORMAL One hindlimb - decreased size abnormal digit morphology
ABNORMAL Both hindlimbs - increased size abnormal digit morphology
ABNORMAL Both hindlimbs - decreased size abnormal digit morphology

Parameter: Forelimb digit - shape IMPC_CSD_048_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb not as expected abnormal digit morphology
ABNORMAL Both forelimbs not as expected abnormal digit morphology
ABNORMAL abnormal digit morphology

Parameter: Hindlimb digit - shape IMPC_CSD_049_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb not as expected abnormal digit morphology
ABNORMAL Both hindlimbs not as expected abnormal digit morphology
ABNORMAL abnormal digit morphology

Parameter: Forelimb nail - number IMPC_CSD_050_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb increased number abnormal nail morphology
ABNORMAL Both forelimbs increased number abnormal nail morphology
ABNORMAL abnormal nail morphology
ABNORMAL One forelimb decreased number abnormal nail morphology
ABNORMAL Both forelimbs decreased number abnormal nail morphology

Parameter: Hindlimb nail - number IMPC_CSD_051_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb increased number abnormal nail morphology
ABNORMAL Both hindlimbs increased number abnormal nail morphology
ABNORMAL abnormal nail morphology
ABNORMAL One hindlimb decreased number abnormal nail morphology
ABNORMAL Both hindlimbs decreased number abnormal nail morphology

Parameter: Forelimb nail - length IMPC_CSD_052_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb increased length abnormal nail morphology
ABNORMAL abnormal nail morphology
ABNORMAL Both forelimbs increased length abnormal nail morphology
ABNORMAL One forelimb decreased length abnormal nail morphology
ABNORMAL Both forelimbs decreased length abnormal nail morphology

Parameter: Hindlimb nail - length IMPC_CSD_053_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb increased length abnormal nail morphology
ABNORMAL Both hindlimbs increased length abnormal nail morphology
ABNORMAL abnormal nail morphology
ABNORMAL One hindlimb decreased length abnormal nail morphology
ABNORMAL Both hindlimbs decreased length abnormal nail morphology

Parameter: Forelimb nail - shape IMPC_CSD_054_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One forelimb not as expected abnormal nail morphology
ABNORMAL Both forelimbs not as expected abnormal nail morphology
ABNORMAL abnormal nail morphology

Parameter: Hindlimb nail - shape IMPC_CSD_055_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL One hindlimb not as expected abnormal nail morphology
ABNORMAL Both hindlimbs not as expected abnormal nail morphology
ABNORMAL abnormal nail morphology

Parameter: Skin color - whole body IMPC_CSD_056_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin coloration
ABNORMAL abnormal skin coloration

Parameter: Skin color - snout IMPC_CSD_057_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin coloration
ABNORMAL abnormal skin coloration

Parameter: Skin color - ear IMPC_CSD_058_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin coloration
ABNORMAL abnormal skin coloration

Parameter: Skin color - front paws IMPC_CSD_059_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin coloration
ABNORMAL abnormal skin coloration

Parameter: Skin color - back paws IMPC_CSD_060_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin coloration
ABNORMAL abnormal skin coloration

Parameter: Skin color - tail IMPC_CSD_061_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin coloration
ABNORMAL abnormal skin coloration

Parameter: Skin texture - whole body IMPC_CSD_062_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin morphology
ABNORMAL abnormal skin morphology

Parameter: Skin texture - snout IMPC_CSD_063_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin morphology
ABNORMAL abnormal skin morphology

Parameter: Skin texture - ear IMPC_CSD_064_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin morphology
ABNORMAL abnormal skin morphology

Parameter: Skin texture - front paws IMPC_CSD_065_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin morphology
ABNORMAL abnormal skin morphology

Parameter: Skin texture - back paws IMPC_CSD_066_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin morphology
ABNORMAL abnormal skin morphology

Parameter: Skin texture - tail IMPC_CSD_067_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal skin morphology
ABNORMAL abnormal skin morphology

Parameter: Teeth presence IMPC_CSD_068_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected absent teeth
ABNORMAL absent teeth

Parameter: Upper teeth appearance IMPC_CSD_069_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal tooth morphology
ABNORMAL abnormal tooth morphology

Parameter: Lower teeth appearance IMPC_CSD_070_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal tooth morphology
ABNORMAL abnormal tooth morphology

Parameter: Genitalia - presence IMPC_CSD_071_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Absent absent external male genitalia M
ABNORMAL Absent absent external female genitalia F
ABNORMAL absent external male genitalia M
ABNORMAL absent external female genitalia F

Parameter: Genitalia - size IMPC_CSD_072_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal male genitalia morphology M
ABNORMAL Not as expected abnormal female genitalia morphology F
ABNORMAL abnormal male genitalia morphology M
ABNORMAL abnormal female genitalia morphology F

Parameter: Genitalia - morphology IMPC_CSD_073_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal male genitalia morphology M
ABNORMAL Not as expected abnormal female genitalia morphology F
ABNORMAL abnormal male genitalia morphology M
ABNORMAL abnormal female genitalia morphology F

Parameter: Mouth morphology IMPC_CSD_074_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal mouth morphology
ABNORMAL abnormal mouth morphology

Parameter: Upper lip morphology IMPC_CSD_075_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal lip morphology
ABNORMAL abnormal lip morphology

Parameter: Lower lip morphology IMPC_CSD_076_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal lip morphology
ABNORMAL abnormal lip morphology

Parameter: Contact righting IMPC_CSD_077_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL impaired righting response
ABNORMAL Absent impaired righting response

Parameter: Vocalization IMPC_CSD_078_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Not as expected abnormal vocalization
ABNORMAL abnormal vocalization

Parameter: Aggression IMPC_CSD_079_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Excessive aggression increased aggression
ABNORMAL increased aggression

Parameter: Head bobbing IMPC_CSD_080_001

Option Increment Ontology Term Ontology ID Sex
ABNORMAL Present head bobbing
ABNORMAL head bobbing

Parameter: Experimenter ID IMPC_CSD_081_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Location of test IMPC_CSD_082_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Number of animals in cage IMPC_CSD_083_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Number of days since cage changed IMPC_CSD_084_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Images IMPC_CSD_085_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Size of squares in arena IMPC_CSD_086_001

There are no Basic Ontology Annotation associations for this Parameter

Parameter: Comments (in English) IMPC_CSD_087_001

There are no Basic Ontology Annotation associations for this Parameter

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