Ontologies in Procedure: Light-Dark Test JAXLA_LDT_002

procedureMetadata: Light side arena dimensions (L x W x H, in mm) JAXLA_LDT_029_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Total distance travelled JAXLA_LDT_015_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Entry way dimensions (L x W x H, in mm) JAXLA_LDT_031_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Vertical activity (rearing) JAXLA_LDT_012_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Light level light chamber JAXLA_LDT_016_002

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Percent time in light JAXLA_LDT_008_002

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased thigmotaxis
DECREASED increased thigmotaxis
ABNORMAL abnormal anxiety-related response

INCREASED

Option:

Increment ID:

Ontology Term: decreased thigmotaxis

Ontology ID: MP:0020870

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: increased thigmotaxis

Ontology ID: MP:0002797

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal anxiety-related response

Ontology ID: MP:0001362

Sex:

procedureMetadata: Software version JAXLA_LDT_034_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Time mobile dark side JAXLA_LDT_005_002

Option Increment Ontology Term Ontology ID Sex
INCREASED hyperactivity
DECREASED hypoactivity
ABNORMAL abnormal locomotor activation

INCREASED

Option:

Increment ID:

Ontology Term: hyperactivity

Ontology ID: MP:0001399

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: hypoactivity

Ontology ID: MP:0001402

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal locomotor activation

Ontology ID: MP:0003313

Sex:

procedureMetadata: Arena version JAXLA_LDT_021_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Repetitive beam break ('stereotypy counts') JAXLA_LDT_014_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Side changes JAXLA_LDT_001_002

Option Increment Ontology Term Ontology ID Sex
INCREASED hyperactivity
DECREASED hypoactivity
ABNORMAL abnormal locomotor activation

INCREASED

Option:

Increment ID:

Ontology Term: hyperactivity

Ontology ID: MP:0001399

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: hypoactivity

Ontology ID: MP:0001402

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal locomotor activation

Ontology ID: MP:0003313

Sex:

procedureMetadata: Light-Dark?box set-up JAXLA_LDT_028_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Disinfectant JAXLA_LDT_025_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Light level dark chamber JAXLA_LDT_017_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Light side time spent JAXLA_LDT_002_002

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased thigmotaxis
DECREASED increased thigmotaxis
ABNORMAL abnormal anxiety-related response

INCREASED

Option:

Increment ID:

Ontology Term: decreased thigmotaxis

Ontology ID: MP:0020870

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: increased thigmotaxis

Ontology ID: MP:0002797

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal anxiety-related response

Ontology ID: MP:0001362

Sex:

seriesParameter: Dark side time spent JAXLA_LDT_004_002

Option Increment Ontology Term Ontology ID Sex
INCREASED increased thigmotaxis
DECREASED decreased thigmotaxis
ABNORMAL abnormal anxiety-related response

INCREASED

Option:

Increment ID:

Ontology Term: increased thigmotaxis

Ontology ID: MP:0002797

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased thigmotaxis

Ontology ID: MP:0020870

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal anxiety-related response

Ontology ID: MP:0001362

Sex:

procedureMetadata: Starting position JAXLA_LDT_026_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Test duration JAXLA_LDT_033_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Equipment ID JAXLA_LDT_022_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Arena ID JAXLA_LDT_020_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Horizontal activity JAXLA_LDT_013_002

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Latency to first transition into dark JAXLA_LDT_006_002

Option Increment Ontology Term Ontology ID Sex
INCREASED decreased exploration in new environment
DECREASED increased exploration in new environment
ABNORMAL abnormal exploration in a new environment

INCREASED

Option:

Increment ID:

Ontology Term: decreased exploration in new environment

Ontology ID: MP:0001417

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: increased exploration in new environment

Ontology ID: MP:0001415

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal exploration in a new environment

Ontology ID: MP:0013189

Sex:

seriesParameter: Time mobile light side JAXLA_LDT_003_002

Option Increment Ontology Term Ontology ID Sex
INCREASED hyperactivity
DECREASED hypoactivity
ABNORMAL abnormal locomotor behavior

INCREASED

Option:

Increment ID:

Ontology Term: hyperactivity

Ontology ID: MP:0001399

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: hypoactivity

Ontology ID: MP:0001402

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal locomotor behavior

Ontology ID: MP:0001392

Sex:

procedureMetadata: Equipment manufacturer JAXLA_LDT_023_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Experimenter ID JAXLA_LDT_018_002

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Transition JAXLA_LDT_009_002

Option Increment Ontology Term Ontology ID Sex
ABNORMAL abnormal anxiety-related response

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal anxiety-related response

Ontology ID: MP:0001362

Sex:

procedureMetadata: Equipment model JAXLA_LDT_024_002

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Percent time in dark JAXLA_LDT_007_002

Option Increment Ontology Term Ontology ID Sex
INCREASED increased thigmotaxis
DECREASED decreased thigmotaxis
ABNORMAL abnormal anxiety-related response

INCREASED

Option:

Increment ID:

Ontology Term: increased thigmotaxis

Ontology ID: MP:0002797

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: decreased thigmotaxis

Ontology ID: MP:0020870

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal anxiety-related response

Ontology ID: MP:0001362

Sex:

procedureMetadata: Dark side arena dimensions (L x W x H, in mm) JAXLA_LDT_030_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Start time JAXLA_LDT_019_002

There are no Basic Ontology Annotation associations for this Parameter

procedureMetadata: Light-Dark?box's walls opaque JAXLA_LDT_027_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Dark side distance travelled JAXLA_LDT_011_002

There are no Basic Ontology Annotation associations for this Parameter

seriesParameter: Light side distance travelled JAXLA_LDT_010_002

There are no Basic Ontology Annotation associations for this Parameter

simpleParameter: Time spent in the light side in the first 5 minutes JAXLA_LDT_032_002

Option Increment Ontology Term Ontology ID Sex
INCREASED abnormal behavioral response to light
DECREASED abnormal behavioral response to light
ABNORMAL abnormal behavioral response to light

INCREASED

Option:

Increment ID:

Ontology Term: abnormal behavioral response to light

Ontology ID: MP:0011275

Sex:

DECREASED

Option:

Increment ID:

Ontology Term: abnormal behavioral response to light

Ontology ID: MP:0011275

Sex:

ABNORMAL

Option:

Increment ID:

Ontology Term: abnormal behavioral response to light

Ontology ID: MP:0011275

Sex: