Gene Summary
IMPC Data Collections
- Body Weight Measurements
- No Embryo Imaging Data
- Viability Data
The IMPC applies a panel of phenotyping screens to characterise single-gene knockout mice by comparison to wild types. Click on the different tabs to visualise significant phenotypes identified by the IMPC, as well as all data that was measured.
Phenotype | System | Allele | Zyg | Sex | Life Stage | P Value |
---|---|---|---|---|---|---|
decreased body length | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 5.50×10-05 | ||
increased mean corpuscular hemoglobin | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 6.29×10-07 | ||
increased coping response | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 1.99×10-05 | ||
abnormal sleep behavior | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 4.90×10-06 | ||
increased kidney weight | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 5.67×10-06 | ||
abnormal kidney morphology | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 0.00 | ||
increased bone mineral content | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 1.65×10-05 | ||
hyperactivity | Zzef1tm2.1(KOMP)Vlcg | HOM | Early adult | 8.91×10-05 |
An assay measuring the expression of lacZ shows the tissue where the gene is expressed.
Anatomy | Images | Zygosity | Mutant Expr |
---|---|---|---|
Adrenal gland | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Aorta | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Bone marrow | Section images | heterozygote | 66.67% (4 of 6) |
Brain | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Brainstem | Section images | heterozygote | 33.33% (2 of 6) |
Brown adipose tissue | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Cartilage tissue | Section images | heterozygote | 33.33% (2 of 6) |
Cecum | Wholemount images Section images | heterozygote | 75% (3 of 4) |
Cerebellum | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Cerebral cortex | Section images | heterozygote | 33.33% (2 of 6) |
Chest bone | Wholemount images | heterozygote | 50% (2 of 4) |
Colon | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Diaphragm | Wholemount images Section images | heterozygote | 50% (2 of 4) |
Duodenum | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Epididymis | Wholemount images Section images | heterozygote | 50% (3 of 6) |
Esophagus | Wholemount images Section images | heterozygote | 83.33% (5 of 6) |
Eye | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Gall bladder | Wholemount images | heterozygote | 25% (1 of 4) |
Gonadal fat pad | Wholemount images Section images | heterozygote | 75% (3 of 4) |
Harderian gland | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Heart | Section images | heterozygote | 33.33% (2 of 6) |
Hippocampus | Section images | heterozygote | 33.33% (2 of 6) |
Hypothalamus | Section images | heterozygote | 33.33% (2 of 6) |
Ileum | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Jejunum | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Kidney | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Large intestine | Section images | heterozygote | 100% (6 of 6) |
Liver | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Lung | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Lymph node | Section images | heterozygote | 33.33% (2 of 6) |
Mammary gland | Section images | heterozygote | 16.67% (1 of 6) |
Mesenteric adipose tissue | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Mesenteric lymph node | Wholemount images Section images | heterozygote | 75% (3 of 4) |
Midbrain | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Olfactory lobe | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Ovary | Wholemount images Section images | heterozygote | 50% (3 of 6) |
Oviduct | Wholemount images Section images | heterozygote | 50% (3 of 6) |
Pancreas | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Parathyroid gland | Wholemount images Section images | heterozygote | 50% (2 of 4) |
Parotid gland | Section images | heterozygote | 25% (1 of 4) |
Penis | Section images | heterozygote | 25% (1 of 4) |
Peripheral nervous system | Section images | heterozygote | 33.33% (2 of 6) |
Peyer's patch | Section images | heterozygote | 33.33% (2 of 6) |
Pituitary gland | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Prostate gland | Section images | heterozygote | 16.67% (1 of 6) |
Quadriceps | Wholemount images Section images | heterozygote | 75% (3 of 4) |
Sciatic nerve | Wholemount images Section images | heterozygote | 75% (3 of 4) |
Skeletal muscle | Section images | heterozygote | 33.33% (2 of 6) |
Skin | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Small intestine | Section images | heterozygote | 100% (6 of 6) |
Spinal cord | Wholemount images Section images | heterozygote | 83.33% (5 of 6) |
Spleen | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Stomach | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Striatum | Section images | heterozygote | 33.33% (2 of 6) |
Sublingual gland | Section images | heterozygote | 50% (2 of 4) |
Submandibular gland | Section images | heterozygote | 66.67% (4 of 6) |
Testis | Wholemount images Section images | heterozygote | 50% (3 of 6) |
Thalamus | Section images | heterozygote | 100% (2 of 2) |
Thymus | Wholemount images Section images | heterozygote | 83.33% (5 of 6) |
Thyroid gland | Wholemount images Section images | heterozygote | 83.33% (5 of 6) |
Tongue | Wholemount images Section images | heterozygote | 100% (4 of 4) |
Trachea | Wholemount images Section images | heterozygote | 83.33% (5 of 6) |
Trigeminal V nerve | Section images | heterozygote | 50% (2 of 4) |
Urinary bladder | Wholemount images Section images | heterozygote | 100% (6 of 6) |
Uterus | Wholemount images Section images | heterozygote | 50% (3 of 6) |
Vagina | Section images | heterozygote | 25% (1 of 4) |
Vas deferens | Wholemount images Section images | heterozygote | 50% (2 of 4) |
Vascular system | Section images | heterozygote | 33.33% (2 of 6) |
Vesicular gland | Wholemount images Section images | heterozygote | 33.33% (2 of 6) |
White adipose tissue | Section images | heterozygote | 33.33% (2 of 6) |
Blood | N/A | heterozygote | 0.0% (0 of 4) |
Hindlimb | N/A | heterozygote | Not available |
Lower urinary tract | N/A | heterozygote | Not available |
Stomach pyloric region | N/A | heterozygote | Not available |
An assay measuring the expression of lacZ shows the tissue where the gene is expressed.
Anatomy | Images | Zygosity | Mutant Expr |
---|---|---|---|
Embryo | N/A | heterozygote | 100% (2 of 2) |
Embryo | N/A | homozygote | Ambiguous |
Brain | N/A | heterozygote | 100% (2 of 2) |
Brain | N/A | homozygote | Ambiguous |
Dorsal root ganglion | N/A | heterozygote | 50% (1 of 2) |
Dorsal root ganglion | N/A | homozygote | Ambiguous |
Ear | N/A | heterozygote | 50% (1 of 2) |
Ear | N/A | homozygote | Ambiguous |
Eye | N/A | heterozygote | 100% (2 of 2) |
Eye | N/A | homozygote | Ambiguous |
Footplate | N/A | heterozygote | 100% (2 of 2) |
Footplate | N/A | homozygote | Ambiguous |
Forebrain | N/A | heterozygote | 100% (2 of 2) |
Forebrain | N/A | homozygote | Ambiguous |
Forelimb | N/A | heterozygote | 100% (2 of 2) |
Forelimb | N/A | homozygote | Ambiguous |
Fronto-nasal process | N/A | heterozygote | Ambiguous |
Fronto-nasal process | N/A | homozygote | Ambiguous |
Handplate | N/A | heterozygote | 100% (2 of 2) |
Handplate | N/A | homozygote | Ambiguous |
Head | N/A | heterozygote | 100% (2 of 2) |
Head | N/A | homozygote | Ambiguous |
Heart | N/A | heterozygote | 100% (2 of 2) |
Heart | N/A | homozygote | Ambiguous |
Hindbrain | N/A | heterozygote | 100% (2 of 2) |
Hindbrain | N/A | homozygote | Ambiguous |
Hindlimb | N/A | heterozygote | 100% (2 of 2) |
Hindlimb | N/A | homozygote | Ambiguous |
Liver | N/A | heterozygote | 0.0% (0 of 2) |
Liver | N/A | homozygote | Ambiguous |
Lung | N/A | heterozygote | Ambiguous |
Lung | N/A | homozygote | Ambiguous |
Mandibular process | N/A | heterozygote | 100% (2 of 2) |
Mandibular process | N/A | homozygote | Ambiguous |
Maxillary process | N/A | heterozygote | 50% (1 of 2) |
Maxillary process | N/A | homozygote | Ambiguous |
Midbrain | N/A | heterozygote | 100% (2 of 2) |
Midbrain | N/A | homozygote | Ambiguous |
Nose | N/A | heterozygote | 100% (2 of 2) |
Nose | N/A | homozygote | Ambiguous |
Oral cavity | N/A | heterozygote | Ambiguous |
Oral cavity | N/A | homozygote | Ambiguous |
Skin | N/A | heterozygote | 50% (1 of 2) |
Skin | N/A | homozygote | Ambiguous |
Spinal cord | N/A | heterozygote | 100% (2 of 2) |
Spinal cord | N/A | homozygote | Ambiguous |
Tail somite | N/A | heterozygote | 50% (1 of 2) |
Tail somite | N/A | homozygote | Ambiguous |
Tail | N/A | heterozygote | 50% (1 of 2) |
Tail | N/A | homozygote | Ambiguous |
Background staining occurs in wild type mice and embryos at an incidental rate.
Anatomy | Background staining in controls (WT) |
---|---|
adrenal gland | 0.67% (4 of 598) |
aorta | 0.17% (1 of 598) |
blood | 0.0% |
bone marrow | 0.0% |
brain | 0.84% (5 of 598) |
brainstem | 0.33% (2 of 598) |
brown adipose tissue | 0.0% |
cartilage tissue | 0.17% (1 of 598) |
cecum | 5.73% (22 of 384) |
cerebellum | 0.5% (3 of 598) |
cerebral cortex | 0.33% (2 of 598) |
chest bone | Unavailable |
colon | 15.71% (22 of 140) |
diaphragm | 0.0% |
duodenum | 3.57% (5 of 140) |
epididymis | 14.29% (21 of 147) |
esophagus | 1.66% (7 of 422) |
eye | 0.0% |
gall bladder | 0.0% |
gonadal fat pad | 0.0% |
harderian gland | 0.71% (1 of 140) |
heart | 0.33% (2 of 598) |
hindlimb | 0.0% |
hippocampus | 0.5% (3 of 598) |
hypothalamus | 0.33% (2 of 598) |
ileum | 14.29% (20 of 140) |
jejunum | 8.57% (12 of 140) |
kidney | 4.52% (27 of 598) |
large intestine | 5.35% (32 of 598) |
liver | 0.0% |
lower urinary tract | 0.17% (1 of 598) |
lung | 0.33% (2 of 598) |
lymph node | 0.17% (1 of 598) |
mammary gland | 0.0% |
mesenteric adipose tissue | 0.0% |
mesenteric lymph node | 0.31% (1 of 323) |
midbrain | 0.0% |
olfactory lobe | 0.33% (2 of 598) |
ovary | 0.17% (1 of 598) |
oviduct | 0.0% |
pancreas | 0.84% (5 of 598) |
parathyroid gland | 0.17% (1 of 576) |
parotid gland | 0.0% |
penis | 0.0% |
peripheral nervous system | 0.33% (2 of 598) |
peyers patch | 0.0% |
pituitary gland | 0.17% (1 of 598) |
prostate gland | 2.17% (13 of 598) |
quadriceps | 0.0% |
sciatic nerve | 0.0% |
skeletal muscle | 0.0% |
skin | 0.17% (1 of 598) |
small intestine | 5.35% (32 of 598) |
spinal cord | 0.5% (3 of 598) |
spleen | 0.5% (3 of 598) |
stomach | 3.68% (22 of 598) |
stomach pyloric region | 0.0% |
striatum | 0.5% (3 of 598) |
sublingual gland | 0.0% |
submandibular gland | 1.38% (2 of 145) |
testis | 1% (6 of 598) |
thalamus | 0.0% |
thymus | 0.17% (1 of 598) |
thyroid gland | 3.01% (18 of 598) |
tongue | 3.57% (5 of 140) |
trachea | 0.5% (3 of 598) |
trigeminal v nerve | 0.0% |
urinary bladder | 0.0% |
uterus | 0.33% (2 of 598) |
vagina | 0.0% |
vas deferens | 4.56% (18 of 395) |
vascular system | 0.0% |
vesicular gland | 0.0% |
white adipose tissue | 0.0% |
Background staining occurs in wild type mice and embryos at an incidental rate.
Background staining occurs in wild type embryos at a measurable rate.
Anatomy | Background staining in controls(WT) |
---|---|
brain | 1.17% (6 of 511) |
dorsal root ganglion | 1.67% (1 of 60) |
ear | 0.2% (1 of 511) |
embryo | 0.39% (2 of 512) |
eye | 0.2% (1 of 511) |
footplate | 0.2% (1 of 511) |
forebrain | 0.2% (1 of 511) |
forelimb | 0.2% (1 of 511) |
fronto-nasal process | 1.64% (1 of 61) |
handplate | 0.2% (1 of 511) |
head | 0.98% (5 of 511) |
heart | 0.2% (1 of 511) |
hindbrain | 1.17% (6 of 511) |
hindlimb | 0.2% (1 of 511) |
liver | 0.2% (1 of 506) |
lung | 0.2% (1 of 506) |
mandibular process | 0.2% (1 of 511) |
maxillary process | 0.2% (1 of 511) |
midbrain | 0.2% (1 of 511) |
nose | 1.28% (1 of 78) |
oral cavity | 0.2% (1 of 506) |
skin | 0.2% (1 of 511) |
spinal cord | 1.39% (1 of 72) |
tail | 0.2% (1 of 511) |
tail somite group | 0.2% (1 of 511) |
The analysis uses data from IMPC, along with published data on other mouse mutants, in comparison to human disease reports in OMIM, Orphanet, and DECIPHER.
Phenotype comparisons summarize the similarity of mouse phenotypes with human disease phenotypes.
The table below shows human diseases predicted to be associated to Zzef1 by phenotypic similarity.
The table below lists publications which used either products generated by the IMPC or data produced by the phenotyping efforts of the IMPC. These publications have also been associated to Zzef1.
There are 3 publications which use IMPC produced mice or data.
Title | Journal | IMPC Allele | PubMed ID |
---|---|---|---|
Neuronal surface P antigen (NSPA) modulates postsynaptic NMDAR stability through ubiquitination of tyrosine phosphatase PTPMEG. | BMC biology (November 2020) | Zzef1tm2.1(KOMP)vlcg | PMC7648380 |
Systematic screening for skin, hair, and nail abnormalities in a large-scale knockout mouse program. | PloS one (July 2017) | Zzef1tm2(KOMP)Vlcg Zzef1tm2.1(KOMP)Vlcg | PMC5503261 |
Pathogenicity of lupus anti-ribosomal P antibodies: role of cross-reacting neuronal surface P antigen in glutamatergic transmission and plasticity in a mouse model. | Arthritis & rheumatology (Hoboken, N.J.) (June 2015) | Zzef1tm1(KOMP)Vlcg | 25709106 |
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MGI Allele | Allele Type | Produced |
---|---|---|
Zzef1tm2(KOMP)Vlcg | Reporter-tagged deletion allele (with selection cassette) | Mice, ES Cells |
Zzef1tm2.1(KOMP)Vlcg | Reporter-tagged deletion allele (post Cre, with no selection cassette) | Mice, Tissue |
Zzef1tm1(KOMP)Vlcg | Reporter-tagged deletion allele (with selection cassette) | ES Cells |
Zzef1tm251649(L1L2_Bact_P) | KO first allele (reporter-tagged insertion with conditional potential) | Targeting vectors |
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