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Genes Phenotypes Help, News, Blog

Gene: Clrn1

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Name
clarin 1
MGI ID
MGI:2388124
Synonyms
USH3 A130002D11Rik clarin-1 Ush3a
Viability
Data available
Embryo viewer
N/A
Other links
MGI   Ensembl  
Significant phenotypes (8) Measurements chart (192) All data table (380)
Expression & images (73) Disease models (0) Order (4)
Significant
Not Significant
Not tested
View body weight measurements
Phenotype System Allele Zyg Sex Life Stage P Value
abnormal auditory brainstem response Clrn1tm1.1(KOMP)Vlcg HOM   Early adult 2.81×10-06
abnormal kidney morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 0.00
abnormal startle reflex Clrn1tm1.1(KOMP)Vlcg HOM Early adult 1.82×10-16
abnormal spleen morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 0.00
abnormal liver morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 0.00
abnormal lung morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 0.00
abnormal skin morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 0.00
abnormal vibrissa morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 5.74×10-06

Download data as:  TSV  XLS

Select physiological systems to view:
Viewing: all phenotypes
Select physiological systems to view:
Viewing: all phenotypes

 Expression

IMPC lacZ Expression Data

 Expression  No Expression  Ambiguous  No Tissue Available
Anatomy #HET Specimens HOM Images? WT Expr Mutant Expr Images
Adrenal gland 2 No  (3/590) N/A
Aorta 2 No  (1/590) N/A
Blood 2 No N/A
Bone marrow 2 No N/A
Brain 2 No  (3/590) N/A
Brainstem 2 No  (2/590) N/A
Brown adipose tissue 2 No N/A
Cartilage tissue 2 No N/A
Cecum 2 No  (12/377) N/A
Cerebellum 2 No  (3/590) N/A
Cerebral cortex 2 No  (2/590) N/A
Chest bone 2 No N/A
Colon 2 No  (12/127) N/A
Diaphragm 2 No N/A
Duodenum 2 No  (2/127) N/A
Epididymis 2 No  (18/134)  (1/2)  Section images
Esophagus 2 No  (7/415) N/A
Eye 2 No  (1/2)  Section images
Gall bladder 2 No N/A
Gonadal fat pad 2 No N/A
Harderian gland 2 No  (1/2)  Section images
Heart 2 No  (1/590) N/A
Hindlimb 2 No N/A
Hippocampus 2 No  (3/590) N/A
Hypothalamus 2 No  (2/590) N/A
Ileum 2 No  (14/127)  (1/2)  Section images
Jejunum 2 No  (6/127) N/A
Kidney 2 No  (20/590) N/A
Large intestine 2 No  (10/590) N/A
Liver 2 No N/A
Lower urinary tract 2 No  (1/590) N/A
Lung 2 No  (1/590) N/A
Lymph node 2 No N/A
Mammary gland 2 No N/A
Mesenteric adipose tissue 2 No N/A
Mesenteric lymph node 2 No N/A
Midbrain 2 No  (1/2)  Section images
Olfactory lobe 2 No  (2/590) N/A
Ovary 2 No  (1/590) N/A
Oviduct 2 No N/A
Pancreas 2 No  (5/590) N/A
Parathyroid gland 2 No N/A
Parotid gland 2 No N/A
Penis 2 No N/A
Peripheral nervous system 2 No  (1/590) N/A
Peyer's patch 2 No N/A
Pituitary gland 2 No  (1/590) N/A
Prostate gland 2 No  (12/590)  (1/2)  Section images
Quadriceps 2 No N/A
Sciatic nerve 2 No N/A
Skeletal muscle 2 No N/A
Skin 2 No  (1/2)  Section images
Small intestine 2 No  (9/590) N/A
Spinal cord 2 No  (2/590) N/A
Spleen 2 No  (2/590) N/A
Stomach 2 No  (13/590) N/A
Stomach pyloric region 2 No N/A
Striatum 2 No  (3/590) N/A
Sublingual gland 2 No N/A
Submandibular gland 2 No  (2/132) N/A
Testis 2 No  (5/590) N/A
Thymus 2 No N/A
Thyroid gland 2 No  (16/590) N/A
Tongue 2 No  (5/127)  (1/2)  Section images
Trachea 2 No  (2/590) N/A
Trigeminal V nerve 2 No  (1/2)  Section images
Urinary bladder 2 No N/A
Uterus 2 No N/A
Vagina 2 No N/A
Vas deferens 2 No  (15/388)  (1/2)  Section images
Vascular system 2 No N/A
Vesicular gland 2 No N/A
White adipose tissue 2 No N/A
LacZ Wholemount Images
LacZ Section Images
Unassigned Top Level MA (7)
digestive system (4)
Ileum expression
MA:0000339
exocrine system (2)
Prostate gland expression
MA:0000404
integumental system (3)
Skin expression
MA:0000151
nervous system (2)
Midbrain expression
MA:0000207
postnatal mouse (16)
Epididymis expression
MA:0000397
reproductive system (4)
Epididymis expression
MA:0000397
respiratory system (3)
Tongue expression
MA:0000347
sensory organ (6)
Eye expression
MA:0000261
trunk (5)
Epididymis expression
MA:0000397
No Embryo expression data was found for this gene.

 Associated Images

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X-ray: XRay Images Whole Body Lateral Orientation
20 Images
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Adult LacZ: LacZ Images Section
23 Images
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X-ray: XRay Images Whole Body Dorso Ventral
20 Images

 Disease Models

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 Order Mouse and ES Cells

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MGI Allele Allele Type Produced
Clrn1tm1.1(KOMP)Vlcg Reporter-tagged deletion allele (post Cre, with no selection cassette) Mice, Tissue
Clrn1tm1(KOMP)Vlcg Reporter-tagged deletion allele (with selection cassette) Mice, Targeting vectors, ES Cells
Clrn1tm1a(EUCOMM)Hmgu KO first allele (reporter-tagged insertion with conditional potential) Targeting vectors, ES Cells
Clrn1tm115517(L1L2_Bact_P) Targeting vectors

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