Genes Phenotypes

Gene: Clrn1

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Name
clarin 1
MGI ID
MGI:2388124
Synonyms
USH3 A130002D11Rik clarin-1 Ush3a
Viability
Homozygous - Viable
Embryo viewer
N/A
Other links
MGI   Ensembl  
Significant phenotypes (3) Measurements chart (178) All data table (368)
Expression & images (73) Disease models (0) Order (4)
Significant
Not Significant
Not tested
View body weight measurements
Phenotype System Allele Zyg Sex Life Stage P Value
abnormal vibrissa morphology Clrn1tm1.1(KOMP)Vlcg HOM Early adult 7.32×10-06
abnormal startle reflex Clrn1tm1.1(KOMP)Vlcg HOM Early adult 1.41×10-29
abnormal auditory brainstem response Clrn1tm1.1(KOMP)Vlcg HOM Early adult 2.20×10-06

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Select physiological systems to view:
Viewing: all phenotypes
Select physiological systems to view:
Viewing: all phenotypes

 Expression

IMPC lacZ Expression Data

 Expression  No Expression  Ambiguous  No Tissue Available
Anatomy #HET Specimens HOM Images? WT Expr Mutant Expr Images
Adrenal gland 2 No  (3/589) N/A
Aorta 2 No  (1/589) N/A
Blood 2 No N/A
Bone marrow 2 No N/A
Brain 2 No  (3/589) N/A
Brainstem 2 No  (2/589) N/A
Brown adipose tissue 2 No N/A
Cartilage tissue 2 No N/A
Cecum 2 No  (12/379) N/A
Cerebellum 2 No  (3/589) N/A
Cerebral cortex 2 No  (2/589) N/A
Chest bone 2 No N/A
Colon 2 No  (12/127) N/A
Diaphragm 2 No N/A
Duodenum 2 No  (2/127) N/A
Epididymis 2 No  (18/134)  (1/2)  Section images
Esophagus 2 No  (7/415) N/A
Eye 2 No  (1/2)  Section images
Gall bladder 2 No N/A
Gonadal fat pad 2 No N/A
Harderian gland 2 No  (1/2)  Section images
Heart 2 No  (1/589) N/A
Hindlimb 2 No N/A
Hippocampus 2 No  (3/589) N/A
Hypothalamus 2 No  (2/589) N/A
Ileum 2 No  (14/127)  (1/2)  Section images
Jejunum 2 No  (6/127) N/A
Kidney 2 No  (20/589) N/A
Large intestine 2 No  (10/589) N/A
Liver 2 No N/A
Lower urinary tract 2 No  (1/589) N/A
Lung 2 No  (1/589) N/A
Lymph node 2 No N/A
Mammary gland 2 No N/A
Mesenteric adipose tissue 2 No N/A
Mesenteric lymph node 2 No N/A
Midbrain 2 No  (1/2)  Section images
Olfactory lobe 2 No  (2/589) N/A
Ovary 2 No  (1/589) N/A
Oviduct 2 No N/A
Pancreas 2 No  (5/589) N/A
Parathyroid gland 2 No N/A
Parotid gland 2 No N/A
Penis 2 No N/A
Peripheral nervous system 2 No  (1/589) N/A
Peyer's patch 2 No N/A
Pituitary gland 2 No  (1/589) N/A
Prostate gland 2 No  (12/589)  (1/2)  Section images
Quadriceps 2 No N/A
Sciatic nerve 2 No N/A
Skeletal muscle 2 No N/A
Skin 2 No  (1/2)  Section images
Small intestine 2 No  (9/589) N/A
Spinal cord 2 No  (2/589) N/A
Spleen 2 No  (2/589) N/A
Stomach 2 No  (13/589) N/A
Stomach pyloric region 2 No N/A
Striatum 2 No  (3/589) N/A
Sublingual gland 2 No N/A
Submandibular gland 2 No  (2/132) N/A
Testis 2 No  (5/589) N/A
Thymus 2 No N/A
Thyroid gland 2 No  (16/589) N/A
Tongue 2 No  (5/127)  (1/2)  Section images
Trachea 2 No  (2/589) N/A
Trigeminal V nerve 2 No  (1/2)  Section images
Urinary bladder 2 No N/A
Uterus 2 No N/A
Vagina 2 No N/A
Vas deferens 2 No  (15/388)  (1/2)  Section images
Vascular system 2 No N/A
Vesicular gland 2 No N/A
White adipose tissue 2 No N/A
LacZ Wholemount Images
LacZ Section Images
Unassigned Top Level MA (7)
digestive system (4)
Ileum expression
MA:0000339
exocrine system (2)
Prostate gland expression
MA:0000404
integumental system (3)
Skin expression
MA:0000151
nervous system (2)
Midbrain expression
MA:0000207
postnatal mouse (16)
Epididymis expression
MA:0000397
reproductive system (4)
Epididymis expression
MA:0000397
respiratory system (3)
Tongue expression
MA:0000347
sensory organ (6)
Eye expression
MA:0000261
trunk (5)
Epididymis expression
MA:0000397
No Embryo expression data was found for this gene.

 Associated Images

Adult LacZ: LacZ Images Section
23 Images
X-ray: XRay Images Whole Body Lateral Orientation
20 Images
X-ray: XRay Images Whole Body Dorso Ventral
20 Images

 Disease Models

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 Order Mouse and ES Cells

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MGI Allele Allele Type Produced
Clrn1tm1.1(KOMP)Vlcg Reporter-tagged deletion allele (post Cre, with no selection cassette) Mice, Tissue
Clrn1tm1a(EUCOMM)Hmgu KO first allele (reporter-tagged insertion with conditional potential) Targeting vectors, ES Cells
Clrn1tm115517(L1L2_Bact_P) Targeting vectors
Clrn1tm1(KOMP)Vlcg Reporter-tagged deletion allele (with selection cassette) Mice, Targeting vectors, ES Cells

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