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Gene: Smarce1 MGI:1927347

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Not currently registered for phenotyping at IMPC

Phenotyping is currently not planned for a knockout strain of this gene.

Gene Summary

Name:
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
Synonyms:
BAF57,  2810417B20Rik,  9030408N19Rik,  5830412H02Rik

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IMPC Data Collections

  • No Body Weight Data
  • No Embryo Imaging Data
  • No Viability Data

IMPC Phenotype Summary

Significant
Not Significant
Not tested

View all our phenotype data below

Phenotypes

The IMPC applies a panel of phenotyping screens to characterise single-gene knockout mice by comparison to wild types. Click on the different tabs to visualise significant phenotypes identified by the IMPC, as well as all data that was measured.

lacZ Expression

Expression data not available

Associated Images

Images submitted by IMPC centres for a selection of procedures. Each set of images is available to view in our image comparator.

Phenotype associated images not available

Human diseases caused by Smarce1 mutations

The analysis uses data from IMPC, along with published data on other mouse mutants, in comparison to human disease reports in OMIM, Orphanet, and DECIPHER.

Phenotype comparisons summarize the similarity of mouse phenotypes with human disease phenotypes.

The table below shows human diseases associated to Smarce1 by orthology or direct annotation.

Disease Similarity of
phenotypes		 Matching phenotypes Source
Coffin-Siris Syndrome
ORPHA:1465
Meningioma
ORPHA:2495
Coffin-Siris Syndrome 5
OMIM:616938
Meningioma, Familial, Susceptibility To
OMIM:607174

The table below shows human diseases predicted to be associated to Smarce1 by phenotypic similarity.

Disease Similarity of
phenotypes		 Matching phenotypes Source
Coffin-Siris Syndrome
ORPHA:1465
Meningioma
ORPHA:2495
Coffin-Siris Syndrome 5
OMIM:616938
Meningioma, Familial, Susceptibility To
OMIM:607174

Histopathology

Summary table of phenotypes displayed during the Histopathology procedure which are considered significant. Full histopathology data table, including submitted images, can be accessed by clicking any row in this table.

There is no histopathology data for Smarce1

IMPC related publications

The table below lists publications which used either products generated by the IMPC or data produced by the phenotyping efforts of the IMPC. These publications have also been associated to Smarce1.

No publications found that use IMPC mice or data for Smarce1.

Order Mouse and ES Cells

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MGI Allele Allele Type Produced
Smarce1tm1a(EUCOMM)Hmgu KO first allele (reporter-tagged insertion with conditional potential) Targeting vectors, ES Cells
Smarce1tm1(KOMP)Vlcg Reporter-tagged deletion allele (with selection cassette) Targeting vectors, ES Cells
Smarce1em1(IMPC)J Exon Deletion Mice

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