Gene Summary
IMPC Data Collections
- Body Weight Measurements
- No Embryo Imaging Data
- Viability Data
The IMPC applies a panel of phenotyping screens to characterise single-gene knockout mice by comparison to wild types. Click on the different tabs to visualise significant phenotypes identified by the IMPC, as well as all data that was measured.
Phenotype | System | Allele | Zyg | Sex | Life Stage | P Value |
---|---|---|---|---|---|---|
enlarged heart | Septin6tm1.1(KOMP)Vlcg | HEM | Early adult | 0.00 | ||
increased circulating alkaline phosphatase level | Septin6tm1.1(KOMP)Vlcg | HEM | Early adult | 6.40×10-05 | ||
abnormal heart morphology | Septin6tm1.1(KOMP)Vlcg | HEM | Early adult | 0.00 | ||
abnormal heart morphology | Septin6tm1.1(KOMP)Vlcg | HOM | Early adult | 0.00 | ||
enlarged heart | Septin6tm1.1(KOMP)Vlcg | HOM | Early adult | 0.00 |
An assay measuring the expression of lacZ shows the tissue where the gene is expressed.
Anatomy | Images | Zygosity | Mutant Expr |
---|---|---|---|
Cerebellum | Section images | hemizygote | 100% (1 of 1) |
Cerebellum | Section images | heterozygote | 100% (1 of 1) |
Duodenum | Section images | heterozygote | 100% (1 of 1) |
Epididymis | Section images | hemizygote | 100% (1 of 1) |
Eye | Section images | hemizygote | 100% (1 of 1) |
Eye | Section images | heterozygote | 100% (1 of 1) |
Harderian gland | Section images | hemizygote | 100% (1 of 1) |
Ileum | Section images | heterozygote | 100% (1 of 1) |
Kidney | Section images | hemizygote | 100% (1 of 1) |
Kidney | Section images | heterozygote | 100% (1 of 1) |
Midbrain | Section images | hemizygote | 100% (1 of 1) |
Midbrain | Section images | heterozygote | 100% (1 of 1) |
Olfactory lobe | Section images | hemizygote | 100% (1 of 1) |
Olfactory lobe | Section images | heterozygote | 100% (1 of 1) |
Parathyroid gland | Section images | hemizygote | 100% (1 of 1) |
Parotid gland | Section images | hemizygote | 100% (1 of 1) |
Parotid gland | Section images | heterozygote | 100% (1 of 1) |
Penis | Section images | hemizygote | 100% (1 of 1) |
Quadriceps | Section images | hemizygote | 100% (1 of 1) |
Spinal cord | Section images | hemizygote | 100% (1 of 1) |
Spinal cord | Section images | heterozygote | 100% (1 of 1) |
Spleen | Section images | hemizygote | 100% (1 of 1) |
Stomach | Section images | hemizygote | 100% (1 of 1) |
Stomach | Section images | heterozygote | 100% (1 of 1) |
Sublingual gland | Section images | hemizygote | 100% (1 of 1) |
Sublingual gland | Section images | heterozygote | 100% (1 of 1) |
Submandibular gland | Section images | hemizygote | 100% (1 of 1) |
Submandibular gland | Section images | heterozygote | 100% (1 of 1) |
Testis | Section images | hemizygote | 100% (1 of 1) |
Thymus | Section images | hemizygote | 100% (1 of 1) |
Thymus | Section images | heterozygote | 100% (1 of 1) |
Tongue | Section images | hemizygote | 100% (1 of 1) |
Tongue | Section images | heterozygote | 100% (1 of 1) |
Trigeminal V nerve | Section images | hemizygote | 100% (1 of 1) |
Vas deferens | Section images | hemizygote | 100% (1 of 1) |
Adrenal gland | N/A | hemizygote | 0.0% (0 of 1) |
Adrenal gland | N/A | heterozygote | 0.0% (0 of 1) |
Aorta | N/A | hemizygote | 0.0% (0 of 1) |
Aorta | N/A | heterozygote | 0.0% (0 of 1) |
Blood | N/A | hemizygote | 0.0% (0 of 1) |
Blood | N/A | heterozygote | 0.0% (0 of 1) |
Bone marrow | N/A | hemizygote | 0.0% (0 of 1) |
Bone marrow | N/A | heterozygote | 0.0% (0 of 1) |
Brain | N/A | hemizygote | 100% (1 of 1) |
Brain | N/A | heterozygote | 100% (1 of 1) |
Brainstem | N/A | hemizygote | Not available |
Brainstem | N/A | heterozygote | Not available |
Brown adipose tissue | N/A | hemizygote | 0.0% (0 of 1) |
Brown adipose tissue | N/A | heterozygote | 0.0% (0 of 1) |
Cartilage tissue | N/A | hemizygote | Not available |
Cartilage tissue | N/A | heterozygote | Not available |
Cecum | N/A | hemizygote | Not available |
Cecum | N/A | heterozygote | 0.0% (0 of 1) |
Cerebral cortex | N/A | hemizygote | Not available |
Cerebral cortex | N/A | heterozygote | Not available |
Chest bone | N/A | hemizygote | Not available |
Chest bone | N/A | heterozygote | Not available |
Colon | N/A | hemizygote | 0.0% (0 of 1) |
Colon | N/A | heterozygote | 0.0% (0 of 1) |
Diaphragm | N/A | hemizygote | 0.0% (0 of 1) |
Diaphragm | N/A | heterozygote | 0.0% (0 of 1) |
Duodenum | N/A | hemizygote | 0.0% (0 of 1) |
Epididymis | N/A | heterozygote | Not available |
Esophagus | N/A | hemizygote | 0.0% (0 of 1) |
Esophagus | N/A | heterozygote | 0.0% (0 of 1) |
Gall bladder | N/A | hemizygote | Not available |
Gall bladder | N/A | heterozygote | Not available |
Gonadal fat pad | N/A | hemizygote | 0.0% (0 of 1) |
Gonadal fat pad | N/A | heterozygote | 0.0% (0 of 1) |
Harderian gland | N/A | heterozygote | 0.0% (0 of 1) |
Heart | N/A | hemizygote | Not available |
Heart | N/A | heterozygote | Not available |
Hindlimb | N/A | hemizygote | Not available |
Hindlimb | N/A | heterozygote | Not available |
Hippocampus | N/A | hemizygote | Not available |
Hippocampus | N/A | heterozygote | Not available |
Hypothalamus | N/A | hemizygote | Not available |
Hypothalamus | N/A | heterozygote | Not available |
Ileum | N/A | hemizygote | 0.0% (0 of 1) |
Jejunum | N/A | hemizygote | Not available |
Jejunum | N/A | heterozygote | 100% (1 of 1) |
Large intestine | N/A | hemizygote | 0.0% (0 of 1) |
Large intestine | N/A | heterozygote | 0.0% (0 of 1) |
Liver | N/A | hemizygote | 0.0% (0 of 1) |
Liver | N/A | heterozygote | 0.0% (0 of 1) |
Lower urinary tract | N/A | hemizygote | Not available |
Lower urinary tract | N/A | heterozygote | Not available |
Lung | N/A | hemizygote | 0.0% (0 of 1) |
Lung | N/A | heterozygote | 0.0% (0 of 1) |
Lymph node | N/A | hemizygote | Not available |
Lymph node | N/A | heterozygote | Not available |
Mammary gland | N/A | hemizygote | Not available |
Mammary gland | N/A | heterozygote | 0.0% (0 of 1) |
Mesenteric adipose tissue | N/A | hemizygote | 0.0% (0 of 1) |
Mesenteric adipose tissue | N/A | heterozygote | 0.0% (0 of 1) |
Mesenteric lymph node | N/A | hemizygote | 0.0% (0 of 1) |
Mesenteric lymph node | N/A | heterozygote | 0.0% (0 of 1) |
Ovary | N/A | hemizygote | Not available |
Ovary | N/A | heterozygote | 0.0% (0 of 1) |
Oviduct | N/A | hemizygote | Not available |
Oviduct | N/A | heterozygote | 0.0% (0 of 1) |
Pancreas | N/A | hemizygote | 0.0% (0 of 1) |
Pancreas | N/A | heterozygote | 0.0% (0 of 1) |
Parathyroid gland | N/A | heterozygote | 0.0% (0 of 1) |
Penis | N/A | heterozygote | Not available |
Peripheral nervous system | N/A | hemizygote | Not available |
Peripheral nervous system | N/A | heterozygote | Not available |
Peyer's patch | N/A | hemizygote | Not available |
Peyer's patch | N/A | heterozygote | Not available |
Pituitary gland | N/A | hemizygote | 0.0% (0 of 1) |
Pituitary gland | N/A | heterozygote | 0.0% (0 of 1) |
Prostate gland | N/A | hemizygote | Not available |
Prostate gland | N/A | heterozygote | Not available |
Quadriceps | N/A | heterozygote | 0.0% (0 of 1) |
Sciatic nerve | N/A | hemizygote | 0.0% (0 of 1) |
Sciatic nerve | N/A | heterozygote | 0.0% (0 of 1) |
Skeletal muscle | N/A | hemizygote | Not available |
Skeletal muscle | N/A | heterozygote | Not available |
Skin | N/A | hemizygote | 0.0% (0 of 1) |
Skin | N/A | heterozygote | 0.0% (0 of 1) |
Small intestine | N/A | hemizygote | 0.0% (0 of 1) |
Small intestine | N/A | heterozygote | 100% (1 of 1) |
Spleen | N/A | heterozygote | 0.0% (0 of 1) |
Stomach pyloric region | N/A | hemizygote | Not available |
Stomach pyloric region | N/A | heterozygote | Not available |
Striatum | N/A | hemizygote | Not available |
Striatum | N/A | heterozygote | Not available |
Testis | N/A | heterozygote | Not available |
Thyroid gland | N/A | hemizygote | 0.0% (0 of 1) |
Thyroid gland | N/A | heterozygote | 0.0% (0 of 1) |
Trachea | N/A | hemizygote | 0.0% (0 of 1) |
Trachea | N/A | heterozygote | 0.0% (0 of 1) |
Trigeminal V nerve | N/A | heterozygote | 0.0% (0 of 1) |
Urinary bladder | N/A | hemizygote | 0.0% (0 of 1) |
Urinary bladder | N/A | heterozygote | 0.0% (0 of 1) |
Uterus | N/A | hemizygote | Not available |
Uterus | N/A | heterozygote | 0.0% (0 of 1) |
Vagina | N/A | hemizygote | Not available |
Vagina | N/A | heterozygote | 0.0% (0 of 1) |
Vas deferens | N/A | heterozygote | Not available |
Vascular system | N/A | hemizygote | Not available |
Vascular system | N/A | heterozygote | Not available |
Vesicular gland | N/A | hemizygote | 0.0% (0 of 1) |
Vesicular gland | N/A | heterozygote | Not available |
White adipose tissue | N/A | hemizygote | Not available |
White adipose tissue | N/A | heterozygote | Not available |
Background staining occurs in wild type mice and embryos at an incidental rate.
Anatomy | Background staining in controls (WT) |
---|---|
adrenal gland | 0.0% |
aorta | 0.0% |
blood | |
bone marrow | |
brain | 0.0% |
brainstem | 0.0% |
brown adipose tissue | 0.0% |
cartilage tissue | 0.0% |
cecum | 0.0% |
cerebellum | 0.0% |
cerebral cortex | 0.0% |
chest bone | |
colon | |
diaphragm | 0.0% |
duodenum | 0.0% |
epididymis | Unavailable |
esophagus | 0.0% |
eye | 0.0% |
gall bladder | 0.0% |
gonadal fat pad | 0.0% |
harderian gland | |
heart | 0.0% |
hindlimb | 0.0% |
hippocampus | 0.0% |
hypothalamus | 0.0% |
ileum | 0.0% |
jejunum | |
kidney | 0.0% |
large intestine | 0.0% |
liver | 0.0% |
lower urinary tract | 0.0% |
lung | 0.0% |
lymph node | 0.0% |
mammary gland | 0.0% |
mesenteric adipose tissue | 0.0% |
mesenteric lymph node | |
midbrain | 0.0% |
olfactory lobe | 0.0% |
ovary | 0.0% |
oviduct | 0.0% |
pancreas | 0.0% |
parathyroid gland | 0.0% |
parotid gland | 0.0% |
penis | 0.0% |
peripheral nervous system | 0.0% |
peyers patch | 0.0% |
pituitary gland | 0.0% |
prostate gland | 0.0% |
quadriceps | 0.0% |
sciatic nerve | 0.0% |
skeletal muscle | 0.0% |
skin | 0.0% |
small intestine | 0.0% |
spinal cord | 0.0% |
spleen | 0.0% |
stomach | 0.0% |
stomach pyloric region | 0.0% |
striatum | 0.0% |
sublingual gland | 0.0% |
submandibular gland | 0.0% |
testis | 0.0% |
thymus | 0.0% |
thyroid gland | 0.0% |
tongue | 0.0% |
trachea | 0.0% |
trigeminal v nerve | 0.0% |
urinary bladder | |
uterus | 0.0% |
vagina | 0.0% |
vas deferens | Unavailable |
vascular system | 0.0% |
vesicular gland | Unavailable |
white adipose tissue | 0.0% |
The analysis uses data from IMPC, along with published data on other mouse mutants, in comparison to human disease reports in OMIM, Orphanet, and DECIPHER.
Phenotype comparisons summarize the similarity of mouse phenotypes with human disease phenotypes.
The table below shows human diseases predicted to be associated to Septin6 by phenotypic similarity.
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MGI Allele | Allele Type | Produced |
---|---|---|
Septin6tm1e(EUCOMM)Hmgu | Targeted, non-conditional allele | ES Cells |
Septin6tm40769(L1L2_gt0) | KO first allele (reporter-tagged insertion with conditional potential) | Targeting vectors |
Septin6tm1.1(KOMP)Vlcg | Reporter-tagged deletion allele (post Cre, with no selection cassette) | Mice, Tissue |
Septin6tm1(KOMP)Vlcg | Reporter-tagged deletion allele (with selection cassette) | Mice, ES Cells |
Septin6tm1a(EUCOMM)Hmgu | KO first allele (reporter-tagged insertion with conditional potential) | Targeting vectors, ES Cells |
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