banner
Genes Phenotypes Help, News, Blog

Gene: Sdc4

Log in to follow
Name
syndecan 4
MGI ID
MGI:1349164
Synonyms
ryudocan Synd4 syndecan-4 S4
Viability
Data available
Embryo viewer
N/A
Other links
MGI   Ensembl  
Significant phenotypes (7) Measurements chart (235) All data table (783)
Expression & images (67) Disease models (0) Histopathology (0) Order (3)
Significant
Not Significant
Not tested
View body weight measurements
Phenotype System Allele Zyg Sex Life Stage P Value
increased neutrophil cell number Sdc4tm2b(KOMP)Wtsi HOM Early adult 3.05×10-05
abnormal retinal blood vessel morphology Sdc4tm2b(KOMP)Wtsi HET   Early adult 5.82×10-05
increased respiratory quotient Sdc4tm2b(KOMP)Wtsi HOM   Early adult 5.93×10-08
decreased circulating serum albumin level Sdc4tm2b(KOMP)Wtsi HOM   Early adult 3.90×10-06
decreased mean platelet volume Sdc4tm2b(KOMP)Wtsi HOM Early adult 4.39×10-05
decreased lymphocyte cell number Sdc4tm2b(KOMP)Wtsi HOM Early adult 1.58×10-07
mydriasis Sdc4tm2b(KOMP)Wtsi HET Early adult 3.60×10-07

Download data as:  TSV  XLS

Select physiological systems to view:
Viewing: all phenotypes
Select physiological systems to view:
Viewing: all phenotypes

 Expression

IMPC lacZ Expression Data

 Expression  No Expression  Ambiguous  No Tissue Available
Anatomy #HET Specimens HOM Images? WT Expr Mutant Expr Images
Adrenal gland 2 No  (3/590)  (2/2)  Wholemount images
Aorta 2 No  (1/590)  (2/2)  Wholemount images
Bone 2 No  (2/2)  Wholemount images
Brain 2 No  (3/590)  (2/2)  Wholemount images
Brainstem 2 No  (2/590)  (2/2)  Wholemount images
Brown adipose tissue 2 No  (2/2)  Wholemount images
Cartilage tissue 2 No  (2/2)  Wholemount images
Cerebellum 2 No  (3/590)  (2/2)  Wholemount images
Cerebral cortex 2 No  (2/590)  (2/2)  Wholemount images
Esophagus 2 No  (7/415)  (2/2)  Wholemount images
Eye 2 No  (2/2)  Wholemount images
Gall bladder 2 No  (2/2)  Wholemount images
Heart 2 No  (1/590)  (2/2)  Wholemount images
Hippocampus 2 No  (3/590)  (2/2)  Wholemount images
Hypothalamus 2 No  (2/590)  (2/2)  Wholemount images
Kidney 2 No  (20/590)  (2/2)  Wholemount images
Large intestine 2 No  (10/590)  (2/2)  Wholemount images
Liver 2 No  (2/2)  Wholemount images
Lower urinary tract 2 No  (1/590)  (2/2)  Wholemount images
Lung 2 No  (1/590)  (2/2)  Wholemount images
Lymph node 2 No  (2/2)  Wholemount images
Mammary gland 2 No  (1/2)  Wholemount images
Olfactory lobe 2 No  (2/590)  (2/2)  Wholemount images
Oral epithelium 2 No  (2/2)  Wholemount images
Ovary 2 No  (1/590)  (1/2)  Wholemount images
Oviduct 2 No  (1/2)  Wholemount images
Pancreas 2 No  (5/590)  (2/2)  Wholemount images
Parathyroid gland 2 No  (2/2)  Wholemount images
Peripheral nervous system 2 No  (1/590)  (2/2)  Wholemount images
Peyer's patch 2 No  (2/2)  Wholemount images
Pituitary gland 2 No  (1/590)  (2/2)  Wholemount images
Prostate gland 2 No  (12/590)  (1/2)  Wholemount images
Skeletal muscle 2 No N/A
Skin 2 No  (2/2)  Wholemount images
Small intestine 2 No  (9/590)  (2/2)  Wholemount images
Spinal cord 2 No  (2/590)  (2/2)  Wholemount images
Spleen 2 No  (2/590)  (2/2)  Wholemount images
Stomach 2 No  (13/590)  (2/2)  Wholemount images
Striatum 2 No  (3/590)  (2/2)  Wholemount images
Testis 2 No  (5/590)  (1/2)  Wholemount images
Thymus 2 No  (2/2)  Wholemount images
Thyroid gland 2 No  (16/590)  (2/2)  Wholemount images
Trachea 2 No  (2/590)  (2/2)  Wholemount images
Uterus 2 No  (1/2)  Wholemount images
Vascular system 2 No  (2/2)  Wholemount images
White adipose tissue 2 No N/A
LacZ Wholemount Images
adipose tissue (1)
Brown adipose tissue expression
MA:0000057
cardiovascular system (3)
Cartilage tissue expression
Vascular System expression
Bone expression
MA:0002718
MA:0000104
MA:0001459
digestive system (5)
Large Intestine expression
MA:0000333
endocrine system (2)
Adrenal gland expression
MA:0000116
exocrine system (2)
Lower Urinary Tract expression
Prostate gland tissue not available
MA:0002636
MA:0000404
immune system (4)
Lymph Node expression
MA:0000139
integumental system (2)
Mammary gland tissue not available
MA:0000145
musculoskeletal system (1)
Cartilage tissue expression
Vascular System expression
Bone expression
MA:0002718
MA:0000104
MA:0001459
nervous system (5)
Brain expression
Cerebral Cortex expression
Hippocampus expression
Striatum expression
MA:0000191
MA:0000891
MA:0000168
MA:0000185
postnatal mouse (28)
Adrenal gland expression
MA:0000116
reproductive system (3)
Lower Urinary Tract expression
Prostate gland tissue not available
MA:0002636
MA:0000404
respiratory system (3)
Lung expression
MA:0000415
sensory organ (1)
Eye expression
MA:0000261
set of connective tissues (3)
Brown adipose tissue expression
MA:0000057
trunk (16)
Adrenal gland expression
MA:0000116
urinary system (2)
Kidney expression
MA:0000368
LacZ Section Images
 Expression  No Expression  Ambiguous  No Tissue Available
Anatomy #HET Specimens WT Expr Mutant Expr Images
Brain 2  (6/506) N/A
Ear 2  (1/506) N/A
Embryo 2  (1/507)  (4/4) N/A
Eye 2  (1/506)  (2/4) N/A
Foot 2  (1/506)  (2/4) N/A
Forebrain 2  (1/506) N/A
Forelimb 2  (1/506)  (2/4) N/A
Hand 2  (1/506)  (2/4) N/A
Head 2  (5/506)  (3/4) N/A
Heart 2  (1/506)  (2/4) N/A
Hindbrain 2  (6/506) N/A
Hindlimb 2  (1/506)  (2/4) N/A
Liver 2  (1/504)  (1/4) N/A
Lung 2  (1/504)  (1/4) N/A
Mandibular process 2  (1/506) N/A
Maxillary process 2  (1/506) N/A
Midbrain 2  (1/506) N/A
Oral cavity 2  (1/504)  (1/4) N/A
Skin 2  (1/506) N/A
Tail 2  (1/506)  (2/4) N/A
Tail somite 2  (1/506) N/A

 Associated Images

thumbnail
X-ray: XRay Images Skull Dorso Ventral Orientation
18 Images
thumbnail
Echo: M-Mode Images
60 Images
thumbnail
X-ray: XRay Images Whole Body Dorso Ventral
18 Images
thumbnail
Embryo LacZ: LacZ images wholemount
8 Images
thumbnail
X-ray: XRay Images Whole Body Lateral Orientation
18 Images
thumbnail
Adult LacZ: LacZ Images Wholemount
28 Images
Auditory Brain Stem Response: Click-evoked + 6 to 30kHz tone waveforms (pdf format)
9 Images

 Disease Models

No associations by disease annotation and gene orthology found.
Please visit the desktop version to see this section

 Histopathology

 Order Mouse and ES Cells

This service may be affected by the Covid-19 pandemic. See how

MGI Allele Allele Type Produced
Sdc4tm2b(KOMP)Wtsi Reporter-tagged deletion allele (post-Cre) Mice
Sdc4tm1a(KOMP)Wtsi KO first allele (reporter-tagged insertion with conditional potential) Targeting vectors, ES Cells
Sdc4tm2a(KOMP)Wtsi KO first allele (reporter-tagged insertion with conditional potential) Mice, Targeting vectors, ES Cells

The IMPC Newsletter

Get highlights of the most important data releases, news and events, delivered straight to your email inbox

Subscribe to newsletter