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Genes Phenotypes

Gene: Sema3f

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Name
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
MGI ID
MGI:1096347
Synonyms
Sema IV Semak
Viability
Homozygous - Subviable
Embryo viewer
N/A
Other links
MGI   Ensembl  
Significant phenotypes (11) Measurements chart (194) All data table (383)
Expression & images (67) Disease models (0) Order (3)
Significant
Not Significant
Not tested
View body weight measurements
Phenotype System Allele Zyg Sex Life Stage P Value
increased circulating iron level Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 4.36×10-06
increased startle reflex Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 2.04×10-06
limb grasping Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 2.47×10-10
preweaning lethality, incomplete penetrance Sema3ftm1b(EUCOMM)Hmgu HOM   Early adult 0.00
abnormal gait Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 1.99×10-07
tremors Sema3ftm1b(EUCOMM)Hmgu HOM   Early adult 5.49×10-06
abnormal nail morphology Sema3ftm1b(EUCOMM)Hmgu HOM   Early adult 1.25×10-05
cataract Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 1.48×10-05
increased lean body mass Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 1.13×10-05
decreased circulating total protein level Sema3ftm1b(EUCOMM)Hmgu HOM Early adult 1.27×10-05
decreased circulating serum albumin level Sema3ftm1b(EUCOMM)Hmgu HOM   Early adult 5.85×10-05

Download data as:  TSV  XLS

Select physiological systems to view:
Viewing: all phenotypes
Select physiological systems to view:
Viewing: all phenotypes

 Expression

IMPC lacZ Expression Data

 Expression  No Expression  Ambiguous  No Tissue Available
Anatomy #HET Specimens HOM Images? WT Expr Mutant Expr Images
Adrenal gland 2 No  (3/590) N/A
Aorta 2 No  (1/590)  (2/2)  Wholemount images
Bone 2 No N/A
Brain 2 No  (3/590)  (2/2)  Wholemount images
Brainstem 2 No  (2/590)  (2/2)  Wholemount images
Brown adipose tissue 2 No N/A
Cartilage tissue 2 No  Wholemount images
Cerebellum 2 No  (3/590)  (2/2)  Wholemount images
Cerebral cortex 2 No  (2/590)  (2/2)  Wholemount images
Esophagus 2 No  (7/415)  (2/2)  Wholemount images
Eye 2 No  (2/2)  Wholemount images
Gall bladder 2 No N/A
Heart 2 No  (1/590) N/A
Hippocampus 2 No  (3/590)  (2/2)  Wholemount images
Hypothalamus 2 No  (2/590)  (2/2)  Wholemount images
Kidney 2 No  (20/590)  (2/2)  Wholemount images
Large intestine 2 No  (10/590)  (2/2)  Wholemount images
Liver 2 No N/A
Lower urinary tract 2 No  (1/590)  (2/2)  Wholemount images
Lung 2 No  (1/590)  (2/2)  Wholemount images
Lymph node 2 No N/A
Mammary gland 2 No N/A
Olfactory lobe 2 No  (2/590)  (2/2)  Wholemount images
Oral epithelium 2 No  (2/2)  Wholemount images
Ovary 2 No  (1/590) N/A
Oviduct 2 No  (1/2)  Wholemount images
Pancreas 2 No  (5/590) N/A
Parathyroid gland 2 No N/A
Peripheral nervous system 2 No  (1/590)  (2/2)  Wholemount images
Peyer's patch 2 No N/A
Pituitary gland 2 No  (1/590)  (2/2)  Wholemount images
Prostate gland 2 No  (12/590) N/A
Skeletal muscle 2 No N/A
Skin 2 No  (2/2)  Wholemount images
Small intestine 2 No  (9/590) N/A
Spinal cord 2 No  (2/590)  (2/2)  Wholemount images
Spleen 2 No  (2/590) N/A
Stomach 2 No  (13/590)  (2/2)  Wholemount images
Striatum 2 No  (3/590)  (2/2)  Wholemount images
Testis 2 No  (5/590)  (1/2)  Wholemount images
Thymus 2 No  (2/2)  Wholemount images
Thyroid gland 2 No  (16/590)  (2/2)  Wholemount images
Trachea 2 No  (2/590)  (2/2)  Wholemount images
Uterus 2 No N/A
Vascular system 2 No  (2/2)  Wholemount images
White adipose tissue 2 No N/A
LacZ Wholemount Images
cardiovascular system (6)
Aorta expression
Vascular System expression
MA:0002718
MA:0000062
digestive system (3)
Large Intestine expression
MA:0000333
endocrine system (1)
Trachea expression
Thyroid gland expression
MA:0000441
MA:0000129
immune system (1)
Thymus expression
MA:0000142
integumental system (1)
Skin expression
MA:0000151
nervous system (6)
Brain expression
Cerebral Cortex expression
Hippocampus expression
Striatum expression
Vascular System expression
MA:0000191
MA:0002718
MA:0000891
MA:0000168
MA:0000185
postnatal mouse (20)
Aorta expression
Vascular System expression
MA:0002718
MA:0000062
reproductive system (2)
Oviduct expression
MA:0000385
respiratory system (3)
Lung expression
MA:0000415
sensory organ (1)
Eye expression
MA:0000261
set of connective tissues (1)
Cartilage tissue no expression
Peripheral Nervous System expression
Vascular System expression
MA:0002718
MA:0000218
MA:0000104
trunk (10)
Aorta expression
Vascular System expression
MA:0002718
MA:0000062
urinary system (2)
Kidney expression
MA:0000368
LacZ Section Images
 Expression  No Expression  Ambiguous  No Tissue Available
Anatomy #HET Specimens WT Expr Mutant Expr Images
Brain 2  (6/506)  (4/4) N/A
Ear 2  (1/506)  (2/4) N/A
Embryo 2  (1/507)  (4/4) N/A
Eye 2  (1/506)  (4/4) N/A
Foot 2  (1/506)  (4/4) N/A
Forebrain 2  (1/506)  (4/4) N/A
Forelimb 2  (1/506)  (4/4) N/A
Hand 2  (1/506)  (4/4) N/A
Head 2  (5/506)  (4/4) N/A
Heart 2  (1/506)  (2/4) N/A
Hindbrain 2  (6/506)  (3/4) N/A
Hindlimb 2  (1/506)  (4/4) N/A
Liver 2  (1/504)  (1/4) N/A
Lung 2  (1/504)  (1/4) N/A
Mandibular process 2  (1/506)  (2/4) N/A
Maxillary process 2  (1/506)  (2/4) N/A
Midbrain 2  (1/506)  (4/4) N/A
Oral cavity 2  (1/504)  (2/4) N/A
Skin 2  (1/506)  (2/4) N/A
Tail 2  (1/506)  (4/4) N/A
Tail somite 2  (1/506)  (2/4) N/A

 Associated Images

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X-ray: XRay Images Whole Body Lateral Orientation
10 Images
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Adult LacZ: LacZ Images Wholemount
20 Images
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Embryo LacZ: LacZ images wholemount
8 Images
thumbnail
X-ray: XRay Images Whole Body Dorso Ventral
9 Images
thumbnail
X-ray: XRay Images Skull Dorso Ventral Orientation
8 Images
Auditory Brain Stem Response: Click-evoked + 6 to 30kHz tone waveforms (pdf format)
7 Images

 Disease Models

No associations by disease annotation and gene orthology found.
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 Order Mouse and ES Cells

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MGI Allele Allele Type Produced
Sema3ftm1b(EUCOMM)Hmgu Reporter-tagged deletion allele (post-Cre) Mice
Sema3ftm1c(EUCOMM)Hmgu Wild type floxed exon (post-Flp) Mice
Sema3ftm1a(EUCOMM)Hmgu KO first allele (reporter-tagged insertion with conditional potential) Mice, Targeting vectors, ES Cells

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