A Light-Dark Test phenotypic assay was performed on 4051 mice. The charts show the results of measuring Percent time in light in 8 female, 8 male mutants compared to 2037 female, 1998 male controls. The mutants are for the Lcn2tm1b(KOMP)Wtsi allele.
decreased thigmotaxis
Loading data
P-values equal or lower to 10-4 (P < 0.0001) are marked as significant.
Percent time in light | JAX | Lcn2tm1b(KOMP)Wtsi | homozygote | Early adult | JR26023 | 1.1x10-2 | 1.06x10-3 | 4.54x10-5 | |
Percent time in dark | JAX | Lcn2tm1b(KOMP)Wtsi | homozygote | Early adult | JR26023 | 1.1x10-2 | 1.06x10-3 | 4.54x10-5 |
Lcn2 data charts
Percent time in lightExperiments performed
Associated phenotype
Zygosity
homozygote
Testing protocol
Measured value
Percent time in light
Testing environment
Lab conditions and equipment
Life stage
Early adult
Background Strain
involves: C57BL/6NJ
Phenotyping center
JAX
* The high throughput nature of the IMPC means that large control sample sizes may accumulate over a long period of time. See the animal welfare guidelines for more information.
Percent time in light / Box plot
Percent time in light / Scatter plot
Results of statistical analysis
Genotype P value
4.54x10-5
Genotype*Female P value
1.06x10-3
Genotype*Male P value
1.1x10-2
Classification
With phenotype threshold value 1e-04 - both sexes equally
Summary statistics of all data in the dataset
Statistical method
Batch effect significant | true |
Variance significant | true |
Genotype*Sex interaction effect p value | 4.54x10-5 |
Genotype parameter estimate | 5.400 |
Genotype standard error estimate | 3.464 |
Genotype Effect P Value | 4.54x10-5 |
Sex Parameter Estimate | 5.400 |
Sex Standard Error Estimate | 1.844 |
Sex Effect P Value | 4.54x10-5 |
Intercept Estimate | 3.541 |
Intercept Estimate Standard Error | 6.085 |
Sex Male KO P Value | 4.54x10-5 |
Sex Female KO P Value | 4.54x10-5 |
WT Residuals Normality Tests | 1.12x10-14 |
KO Residuals Normality Tests | 4.37x10-2 |
Statistical analysis API access
Experimental data download
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