decreased thigmotaxis

  Loading data
P-values equal or lower to 10-4 (P < 0.0001) are marked as significant.
Percent time in lightJAXLcn2tm1b(KOMP)WtsihomozygoteEarly adultJR260231.1x10-21.06x10-34.54x10-5
Percent time in darkJAXLcn2tm1b(KOMP)WtsihomozygoteEarly adultJR260231.1x10-21.06x10-34.54x10-5

Lcn2 data charts

Percent time in light
Combination tested with the lowest p-value of 4.54x10-5
Experiments performed

A Light-Dark Test phenotypic assay was performed on 4051 mice. The charts show the results of measuring Percent time in light in 8 female, 8 male mutants compared to 2037 female, 1998 male controls. The mutants are for the Lcn2tm1b(KOMP)Wtsi allele.

Associated phenotype
Zygosity
homozygote
Testing protocol
Measured value
Percent time in light
Testing environment
Lab conditions and equipment
Life stage
Early adult
Background Strain
involves: C57BL/6NJ
Phenotyping center
JAX

* The high throughput nature of the IMPC means that large control sample sizes may accumulate over a long period of time. See the animal welfare guidelines for more information.

Percent time in light / Box plot
Percent time in light / Scatter plot

Results of statistical analysis

Summary statistics of all data in the dataset

Statistical method

Batch effect significant true
Variance significant true
Genotype*Sex interaction effect p value 4.54x10-5
Genotype parameter estimate 5.400
Genotype standard error estimate 3.464
Genotype Effect P Value 4.54x10-5
Sex Parameter Estimate 5.400
Sex Standard Error Estimate 1.844
Sex Effect P Value 4.54x10-5
Intercept Estimate 3.541
Intercept Estimate Standard Error 6.085
Sex Male KO P Value 4.54x10-5
Sex Female KO P Value 4.54x10-5
WT Residuals Normality Tests 1.12x10-14
KO Residuals Normality Tests 4.37x10-2

Windowing parameters

View documentation about soft windowing
Sharpness (k) 8.324
Bandwidth (l)74

Experimental data download

Download data as:  

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