A Hole-board Exploration phenotypic assay was performed on 1235 mice. The charts show the results of measuring Total holepokes in 9 female, 9 male mutants compared to 605 female, 612 male controls. The mutants are for the Lrrtm1em1(IMPC)Mbp allele.
increased exploration in new environment
Loading data
P-values equal or lower to 10-4 (P < 0.0001) are marked as significant.
Total holepokes | UC Davis | Lrrtm1em1(IMPC)Mbp | homozygote | Early adult | CR10035 | 4.71x10-10 | 9.12x10-3 | 9.12x10-3 |
Lrrtm1 data charts
Total holepokesExperiments performed
Associated phenotype
Zygosity
homozygote
Testing protocol
Measured value
Total holepokes
Testing environment
Lab conditions and equipment
Life stage
Early adult
Background Strain
involves: C57BL/6NCrl
Phenotyping center
UC Davis
* The high throughput nature of the IMPC means that large control sample sizes may accumulate over a long period of time. See the animal welfare guidelines for more information.
Total holepokes / Box plot
Total holepokes / Scatter plot
Results of statistical analysis
Genotype P value
9.12x10-3
Genotype*Female P value
9.12x10-3
Genotype*Male P value
4.71x10-10
Classification
Overally insignificant [level = 1e-04 , pvalue = 0.00912349144092528 ]; but with phenotype threshold value 1e-04 - different size as males greater
Summary statistics of all data in the dataset
Statistical method
Batch effect significant | true |
Variance significant | true |
Genotype*Sex interaction effect p value | 9.12x10-3 |
Genotype parameter estimate | 6.340 |
Genotype standard error estimate | 3.862 |
Genotype Effect P Value | 9.12x10-3 |
Sex Parameter Estimate | 6.340 |
Sex Standard Error Estimate | 1.113 |
Sex Effect P Value | 9.12x10-3 |
Intercept Estimate | -8.392 |
Intercept Estimate Standard Error | 3.237 |
Sex Male KO P Value | 9.12x10-3 |
Sex Female KO P Value | 9.12x10-3 |
WT Residuals Normality Tests | 1.01x10-34 |
KO Residuals Normality Tests | 5.48x10-2 |
Statistical analysis API access
Experimental data download
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