decreased exploration in new environment

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P-values equal or lower to 10-4 (P < 0.0001) are marked as significant.
Latency to first transition into darkJAXBbs4tm1b(EUCOMM)HmguheterozygoteEarly adultJR246614.35x10-95.01x10-15.01x10-1

Bbs4 data charts

Latency to first transition into dark
Combination tested with the lowest p-value of 4.35x10-9
Experiments performed

A Light-Dark Test phenotypic assay was performed on 4049 mice. The charts show the results of measuring Latency to first transition into dark in 8 female, 6 male mutants compared to 2037 female, 1998 male controls. The mutants are for the Bbs4tm1b(EUCOMM)Hmgu allele.

Associated phenotype
Zygosity
heterozygote
Testing protocol
Measured value
Latency to first transition into dark
Testing environment
Lab conditions and equipment
Life stage
Early adult
Background Strain
involves: C57BL/6NJ
Phenotyping center
JAX

* The high throughput nature of the IMPC means that large control sample sizes may accumulate over a long period of time. See the animal welfare guidelines for more information.

Latency to first transition into dark / Box plot
Latency to first transition into dark / Scatter plot

Results of statistical analysis

Summary statistics of all data in the dataset

Statistical method

Batch effect significant true
Variance significant true
Genotype*Sex interaction effect p value 5.01x10-1
Genotype parameter estimate 41.638
Genotype standard error estimate 48.080
Genotype Effect P Value 5.01x10-1
Sex Parameter Estimate 41.638
Sex Standard Error Estimate 6.202
Sex Effect P Value 5.01x10-1
Intercept Estimate 137.082
Intercept Estimate Standard Error 19.616
Sex Male KO P Value 5.01x10-1
Sex Female KO P Value 5.01x10-1
WT Residuals Normality Tests 2.82x10-54
KO Residuals Normality Tests 2.94x10-1

Windowing parameters

View documentation about soft windowing
Sharpness (k) 2.305
Bandwidth (l)1854

Experimental data download

Download data as:  

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