Previous IMPC Data Release 10.1 Notes

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Highlights

Release notes: Represents a minor data release. Changes include:

Includes additional Acoustic Startle and Pre-pulse Inhibition (PPI) derived parameters for % Pre-pulse inhibition - Global. The formula was updated to relax derivation requirements. Specifically the update allows derivations to be calculated using 3 % PPI parameters rather than requiring all 4.
Updates to automated methods of detecting anomolous or missing data resulted in some extraneous datapoints being removed.
The embryonic day associated to Viability E14.5-E15.5 Secondary Screen was updated from E14.5 to E15.5
The process for generating genotype to phenotype associations for categorical parameters has been changed. A phenotpye call is made in the case where the data analysis for each individual sex is not significant, but analysis using the combined data from both sexes is significant.
Fixed issue analyzing Combined retina parameter resulting in more phenotype calls.

Phenotyping Center	Mutant Lines	Baseline Mice	Mutant Mice
JAX	1,226	8,413	35,252
TCP	546	7,104	24,892
HMGU	311	3,173	5,770
KMPC	43	869	1,067
MARC	232	1,877	3,776
MRC Harwell	596	5,893	15,626
RBRC	96	2,023	1,859
ICS	223	2,325	3,554
WTSI	1,329	4,540	21,316
BCM	597	4,572	17,476
UC Davis	1,056	4,156	23,749

Data Type	QC passed	QC failed	issues
categorical	14,917,864	3,835 ^*	16,974 ^*
unidimensional	11,116,529	43,508 ^*	293,835 ^*
time series	13,444,019	2,615 ^*	11 ^*
text	192,175	11,124 ^*	45,751 ^*
image record	469,960	0	0