Histopathology data for Stk31

Score Definitions

Severity Score:

  • 0 = Normal,
  • 1 = Mild (observation barely perceptible and not believed to have clinical significance),
  • 2 = Moderate (observation visible but involves minor proportion of tissue and clinical consequences of observation are most likely subclinical),
  • 3 = Marked (observation clearly visible involves a significant proportion of tissue and is likely to have some clinical manifestations generally expected to be minor),
  • 4 = Severe (observation clearly visible involves a major proportion of tissue and clinical manifestations are likely associated with significant tissue dysfunction or damage)

Significance Score:

  • 0 = Not significant: Interpreted by the histopathologist to be a finding attributable to background strain (e.g. low-incidence hydrocephalus, microphthalmia) or incidental to mutant phenotype (e.g. hair-induced glossitis, focal hyperplasia, mild mononuclear cell infiltrate).
  • 1 = Significant: Interpreted by the histopathologist as a finding not attributable to background strain and not incidental to mutant phenotype.


Zyg Sex Mouse Tissue MPATH Process Term Severity Score Significance Score MPATH Diagnostic PATO Descriptor Free Text Images
HOM F #1 Lymph node [MA:0000139] 0 0
HOM F #1 Urinary bladder [MA:0000380] 0 0
HOM M #4 Pancreas [MA:0000120] 0 0
HOM F #1 Ovary [MA:0000384] 0 0
HOM M #2 Tongue [MA:0000347] 0 0
HOM M #2 Femur [MA:0001359] 0 0
HOM M #4 Spinal cord [MA:0000216] 0 0
HOM M #4 Bone marrow [MA:0000134] 0 0
HOM F #3 Spleen [MA:0000141] 0 0
HOM M #2 Prostate gland [MA:0000404] 0 0
HOM M #4 Femur [MA:0001359] 0 0
HOM F #1 Liver [MA:0000358] 0 0
HOM M #2 Gall bladder [MA:0000356] 0 0
HOM M #4 Tooth [MA:0000348] 0 0
HOM F #1 Brain [MA:0000168] 0 0
HOM F #3 Urinary bladder [MA:0000380] 0 0
HOM F #3 Small intestine [MA:0000337] 0 0
HOM F #3 Lymph node [MA:0000139] 0 0
HOM M #2 Spinal cord [MA:0000216] 0 0
HOM F #3 Ear [MA:0000236] 0 0
HOM F #3 Liver [MA:0000358] 0 0
HOM M #2 Bone marrow [MA:0000134] 0 0
HOM F #3 Thyroid 0 0
HOM F #1 Spleen [MA:0000141] 0 0
HOM M #4 Sternum [MA:0001331] 0 0
HOM M #2 Uterus [MA:0000389] Not applicable
HOM F #3 Testis [MA:0000411] Not applicable
HOM M #4 Lung [MA:0000415] 0 0
HOM M #2 Epididymis [MA:0000397] 0 0
HOM M #4 Ear [MA:0000236] 0 0
HOM M #2 Sternum [MA:0001331] 0 0
HOM F #3 Heart [MA:0000072] 0 0
HOM F #3 Salivary gland [MA:0000346] 0 0
HOM M #2 Tooth [MA:0000348] 0 0
HOM M #2 Pancreas [MA:0000120] 0 0
HOM F #3 Bone marrow [MA:0000134] 0 0
HOM M #2 Large intestine [MA:0000333] 0 0
HOM F #3 Seminal vesicle [MA:0000410] Not applicable
HOM M #2 Trachea [MA:0000441] 0 0
HOM M #4 Prostate gland [MA:0000404] 0 0
HOM F #3 Optic II nerve [MA:0001097] 0 0
HOM F #3 Adrenal gland [MA:0000116] 0 0
HOM M #2 Thymus [MA:0000142] 0 0
HOM M #4 Epididymis [MA:0000397] 0 0
HOM M #4 Salivary gland [MA:0000346] 0 0
HOM M #4 Thymus [MA:0000142] 0 0
HOM F #3 Spinal cord [MA:0000216] 0 0
HOM M #2 Ear [MA:0000236] 0 0
HOM F #1 Pancreas [MA:0000120] 0 0
HOM F #1 Lung [MA:0000415] 0 0
HOM M #4 Adrenal gland [MA:0000116] 0 0
HOM F #3 Prostate gland [MA:0000404] Not applicable
HOM M #4 Uterus [MA:0000389] Not applicable
HOM M #2 Sciatic nerve [MA:0001172] 0 0
HOM F #3 Skin [MA:0000151] 0 0
HOM F #1 Stomach [MA:0000353] 0 0
HOM M #4 Trachea [MA:0000441] 0 0
HOM F #1 Small intestine [MA:0000337] 0 0
HOM F #1 Ear [MA:0000236] 0 0
HOM M #2 Thyroid 0 0
HOM M #2 Nasal cavity [MA:0000284] 0 0
HOM M #2 Mammary gland [MA:0000145] Not applicable
HOM F #1 Sciatic nerve [MA:0001172] 0 0
HOM M #2 Lung [MA:0000415] 0 0
HOM M #4 Mammary gland [MA:0000145] Not applicable
HOM M #2 Esophagus [MA:0000352] 0 0
HOM F #3 Ovary [MA:0000384] 0 0
HOM F #3 Skeletal muscle [MA:0003148] 0 0
HOM F #3 Kidney [MA:0000368] 0 0
HOM F #1 Large intestine [MA:0000333] 0 0
HOM M #4 Heart [MA:0000072] 0 0
HOM M #4 Thyroid 0 0
HOM F #1 Eye [MA:0000261] 0 0
HOM M #4 Gall bladder [MA:0000356] 0 0
HOM F #1 Tooth [MA:0000348] 0 0
HOM M #4 Esophagus [MA:0000352] 0 0
HOM F #1 Seminal vesicle [MA:0000410] Not applicable
HOM F #1 Tongue [MA:0000347] 0 0
HOM F #1 Optic II nerve [MA:0001097] 0 0
HOM F #1 Testis [MA:0000411] Not applicable
HOM F #3 Large intestine [MA:0000333] 0 0
HOM F #1 Uterus [MA:0000389] 0 0
HOM M #2 Brain [MA:0000168] 0 0
HOM F #3 Trachea [MA:0000441] 0 0
HOM F #1 Gall bladder [MA:0000356] 0 0
HOM M #2 Skin [MA:0000151] 0 0
HOM F #1 Epididymis [MA:0000397] Not applicable
HOM F #1 Esophagus [MA:0000352] 0 0
HOM F #1 Thymus [MA:0000142] 0 0
HOM M #2 Seminal vesicle [MA:0000410] 0 0
HOM F #3 Epididymis [MA:0000397] Not applicable
HOM F #3 Thymus [MA:0000142] 0 0
HOM F #3 Sciatic nerve [MA:0001172] 0 0
HOM M #2 Optic II nerve [MA:0001097] 0 0
HOM M #2 Heart [MA:0000072] 0 0
HOM M #4 Skin [MA:0000151] 0 0
HOM F #3 Uterus [MA:0000389] 0 0
HOM M #2 Ovary [MA:0000384] Not applicable
HOM M #4 Sciatic nerve [MA:0001172] 0 0
HOM F #3 Gall bladder [MA:0000356] 0 0
HOM M #2 Adrenal gland [MA:0000116] 0 0
HOM M #2 Lymph node [MA:0000139] 0 0
HOM M #4 Nasal cavity [MA:0000284] 0 0
HOM F #3 Esophagus [MA:0000352] 0 0
HOM F #3 Stomach [MA:0000353] 0 0
HOM M #4 Brain [MA:0000168] 0 0
HOM F #1 Spinal cord [MA:0000216] 0 0
HOM F #1 Prostate gland [MA:0000404] Not applicable
HOM F #3 Sternum [MA:0001331] 0 0
HOM M #2 Testis [MA:0000411] 0 0
HOM M #2 Salivary gland [MA:0000346] 0 0
HOM F #1 Nasal cavity [MA:0000284] 0 0
HOM F #3 Tongue [MA:0000347] 0 0
HOM F #1 Skeletal muscle [MA:0003148] 0 0
HOM F #1 Kidney [MA:0000368] 0 0
HOM M #4 Ovary [MA:0000384] Not applicable
HOM F #3 Mammary gland [MA:0000145] 0 0
HOM F #3 Eye [MA:0000261] 0 0
HOM F #1 Femur [MA:0001359] 0 0
HOM F #3 Femur [MA:0001359] 0 0
HOM F #1 Bone marrow [MA:0000134] 0 0
HOM F #1 Thyroid 0 0
HOM M #2 Spleen [MA:0000141] 0 0
HOM F #3 Tooth [MA:0000348] 0 0
HOM M #4 Liver [MA:0000358] 0 0
HOM M #4 Lymph node [MA:0000139] 0 0
HOM M #4 Eye [MA:0000261] 0 0
HOM M #2 Eye [MA:0000261] 1 0 chronic multi-localised Multiocal retinal dysplasia.
HOM M #2 Stomach [MA:0000353] 0 0
HOM F #3 Pancreas [MA:0000120] 0 0
HOM M #4 Large intestine [MA:0000333] 0 0
HOM M #4 Spleen [MA:0000141] 0 0
HOM M #4 Testis [MA:0000411] 0 0
HOM F #3 Brain [MA:0000168] 0 0
HOM M #4 Kidney [MA:0000368] 0 0
HOM M #4 Tongue [MA:0000347] 0 0
HOM M #2 Urinary bladder [MA:0000380] 0 0
HOM M #4 Stomach [MA:0000353] 0 0
HOM M #4 Skeletal muscle [MA:0003148] 0 0
HOM M #2 Liver [MA:0000358] 0 0
HOM F #3 Lung [MA:0000415] 0 0
HOM F #1 Trachea [MA:0000441] 0 0
HOM F #1 Skin [MA:0000151] 0 0
HOM M #4 Seminal vesicle [MA:0000410] 0 0
HOM M #4 Small intestine [MA:0000337] 0 0
HOM M #4 Optic II nerve [MA:0001097] 0 0
HOM F #1 Sternum [MA:0001331] 0 0
HOM M #4 Urinary bladder [MA:0000380] 0 0
HOM M #2 Kidney [MA:0000368] 0 0
HOM M #2 Skeletal muscle [MA:0003148] 0 0
HOM F #1 Mammary gland [MA:0000145] 0 0
HOM F #3 Nasal cavity [MA:0000284] 0 0
HOM M #2 Small intestine [MA:0000337] 0 0
HOM F #1 Heart [MA:0000072] 0 0
HOM F #1 Adrenal gland [MA:0000116] 0 0
HOM F #1 Salivary gland [MA:0000346] 0 0

Associated histopathology images

The IMPC Newsletter

Get highlights of the most important data releases, news and events, delivered straight to your email inbox

Subscribe to newsletter